Mutagenetix > Incidental Mutation

Incidental Mutation 'R9066:Dctn4'

689288

Institutional Source

Beutler Lab

Gene Symbol

Dctn4

Ensembl Gene

ENSMUSG00000024603

Gene Name

dynactin 4

Synonyms

C130039E17Rik, 4930547K17Rik, 1110001K06Rik, p62

MMRRC Submission

068891-MU

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R9066 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

60659257-60691838 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 60659387 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Leucine at position 29 (F29L)

Ref Sequence

ENSEMBL: ENSMUSP00000025505 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000025505] [ENSMUST00000223590] [ENSMUST00000223984]

AlphaFold

Q8CBY8

Predicted Effect

probably damaging
Transcript: ENSMUST00000025505
AA Change: F29L

PolyPhen 2 Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000025505
Gene: ENSMUSG00000024603
AA Change: F29L

Domain	Start	End	E-Value	Type
Pfam:Dynactin_p62	23	172	4.8e-24	PFAM
Pfam:Dynactin_p62	125	378	8e-20	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000223590
AA Change: F29L

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)

Predicted Effect

probably damaging
Transcript: ENSMUST00000223984
AA Change: F29L

PolyPhen 2 Score 0.990 (Sensitivity: 0.72; Specificity: 0.97)

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.3%

Validation Efficiency

96% (46/48)

Allele List at MGI

Other mutations in this stock

Total: 48 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca7	A	G	10: 79,849,188 (GRCm39)	T1858A	probably damaging	Het
Atp1a1	A	G	3: 101,489,338 (GRCm39)	I758T	probably damaging	Het
Atp2c1	T	C	9: 105,330,845 (GRCm39)	E225G	probably damaging	Het
Clec7a	A	C	6: 129,444,491 (GRCm39)	S115A	probably benign	Het
Cnbd1	T	C	4: 19,098,181 (GRCm39)	T80A	probably benign	Het
Ctu1	A	G	7: 43,326,019 (GRCm39)	H226R	possibly damaging	Het
Dnajb2	A	G	1: 75,217,874 (GRCm39)	T169A		Het
Efcab3	T	A	11: 104,631,688 (GRCm39)		probably benign	Het
Esf1	A	T	2: 139,990,693 (GRCm39)	M597K	probably benign	Het
Fzd7	C	T	1: 59,521,991 (GRCm39)		probably benign	Het
Gapvd1	C	A	2: 34,617,297 (GRCm39)	Q349H	probably damaging	Het
Garin5b	T	C	7: 4,773,518 (GRCm39)		probably benign	Het
Gata5	A	G	2: 179,968,761 (GRCm39)	F371S		Het
Gm572	A	T	4: 148,751,278 (GRCm39)	Q217L	possibly damaging	Het
Igkv14-130	T	A	6: 67,768,219 (GRCm39)	M26K	probably damaging	Het
Jchain	T	G	5: 88,675,638 (GRCm39)	M1L	probably benign	Het
Kcnj14	G	A	7: 45,469,073 (GRCm39)	T144M	probably damaging	Het
Kirrel2	C	A	7: 30,153,454 (GRCm39)	A302S	probably damaging	Het
Klhl29	C	T	12: 5,260,114 (GRCm39)	V35I	probably benign	Het
Kndc1	C	T	7: 139,507,708 (GRCm39)	S1222F	possibly damaging	Het
Lgi4	A	C	7: 30,759,446 (GRCm39)	M1L	probably benign	Het
Ncr1	A	G	7: 4,347,552 (GRCm39)	D276G	probably benign	Het
Nfatc3	T	A	8: 106,825,782 (GRCm39)	M619K	probably benign	Het
Nudcd1	A	T	15: 44,243,588 (GRCm39)	F441I	probably damaging	Het
Nxt2	C	T	X: 141,020,747 (GRCm39)	A118V	possibly damaging	Het
Or10a3n	A	T	7: 108,493,253 (GRCm39)	Y125*	probably null	Het
Or8b12	T	G	9: 37,657,871 (GRCm39)	V147G	possibly damaging	Het
Pop1	A	T	15: 34,516,060 (GRCm39)	Q586L	possibly damaging	Het
Prss3b	C	T	6: 41,008,640 (GRCm39)	G225R	probably benign	Het
Rcbtb1	T	G	14: 59,462,206 (GRCm39)	I279S	possibly damaging	Het
Rsf1	CGGCGGCGG	CGGCGGCGGGGGCGGCGG	7: 97,229,118 (GRCm39)		probably benign	Het
Serpine3	A	G	14: 62,929,555 (GRCm39)	D401G	probably damaging	Het
Slc25a4	A	G	8: 46,662,115 (GRCm39)	V181A	probably damaging	Het
Slc26a2	T	G	18: 61,335,130 (GRCm39)	I108L	probably benign	Het
Slc27a5	A	C	7: 12,722,530 (GRCm39)	V648G	possibly damaging	Het
Slc2a7	T	C	4: 150,250,872 (GRCm39)	F431S	probably damaging	Het
Sox11	T	C	12: 27,391,422 (GRCm39)	H329R	possibly damaging	Het
Speg	G	A	1: 75,361,654 (GRCm39)	G223R	probably damaging	Het
Synpo2	G	A	3: 122,911,133 (GRCm39)	H171Y	possibly damaging	Het
Tle6	G	T	10: 81,430,212 (GRCm39)	N323K	possibly damaging	Het
Ugt3a1	A	T	15: 9,367,384 (GRCm39)	M376L	possibly damaging	Het
Unc13d	T	C	11: 115,957,561 (GRCm39)	K798R	probably benign	Het
Vasp	A	T	7: 18,998,433 (GRCm39)	H80Q	probably damaging	Het
Vmn2r28	T	C	7: 5,491,596 (GRCm39)	D217G	probably damaging	Het
Vps41	T	C	13: 19,008,018 (GRCm39)	S284P	probably damaging	Het
Zer1	A	C	2: 30,000,686 (GRCm39)	L245R	probably damaging	Het
Zfp516	G	T	18: 82,973,964 (GRCm39)	R54L	probably damaging	Het
Zfp868	T	C	8: 70,064,292 (GRCm39)	K348E	probably damaging	Het

Other mutations in Dctn4

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01939:Dctn4	APN	18	60,677,202 (GRCm39)	missense	probably benign	0.12
R0040:Dctn4	UTSW	18	60,677,114 (GRCm39)	missense	possibly damaging	0.71
R1406:Dctn4	UTSW	18	60,689,402 (GRCm39)	missense	probably benign
R1406:Dctn4	UTSW	18	60,689,402 (GRCm39)	missense	probably benign
R1464:Dctn4	UTSW	18	60,671,478 (GRCm39)	missense	probably damaging	0.97
R1464:Dctn4	UTSW	18	60,671,478 (GRCm39)	missense	probably damaging	0.97
R1785:Dctn4	UTSW	18	60,679,407 (GRCm39)	critical splice donor site	probably null
R1786:Dctn4	UTSW	18	60,679,407 (GRCm39)	critical splice donor site	probably null
R2035:Dctn4	UTSW	18	60,671,489 (GRCm39)	missense	possibly damaging	0.91
R2064:Dctn4	UTSW	18	60,671,349 (GRCm39)	missense	possibly damaging	0.60
R4020:Dctn4	UTSW	18	60,671,329 (GRCm39)	splice site	probably benign
R4748:Dctn4	UTSW	18	60,683,308 (GRCm39)	missense	probably damaging	1.00
R4786:Dctn4	UTSW	18	60,688,267 (GRCm39)	missense	probably damaging	1.00
R4976:Dctn4	UTSW	18	60,689,464 (GRCm39)	missense	probably benign	0.00
R5034:Dctn4	UTSW	18	60,685,956 (GRCm39)	missense	probably benign	0.23
R5110:Dctn4	UTSW	18	60,679,387 (GRCm39)	missense	probably damaging	0.96
R6210:Dctn4	UTSW	18	60,679,865 (GRCm39)	nonsense	probably null
R7836:Dctn4	UTSW	18	60,679,348 (GRCm39)	missense	probably benign	0.00
R8221:Dctn4	UTSW	18	60,689,401 (GRCm39)	missense	probably benign
R8261:Dctn4	UTSW	18	60,659,343 (GRCm39)	missense	possibly damaging	0.61
R8299:Dctn4	UTSW	18	60,678,872 (GRCm39)	missense	probably benign	0.01
R9024:Dctn4	UTSW	18	60,678,894 (GRCm39)	critical splice donor site	probably null
R9177:Dctn4	UTSW	18	60,659,304 (GRCm39)	start codon destroyed	probably null	1.00
R9268:Dctn4	UTSW	18	60,659,304 (GRCm39)	start codon destroyed	probably null	1.00

Predicted Primers

PCR Primer
(F):5'- GGTCGGTTTAGCTTACGTCAAC -3'
(R):5'- GCAAAGCCAGCTGAATGATG -3'

Sequencing Primer
(F):5'- GTCTACGTAAAAGGCGTAG -3'
(R):5'- CTGAATGATGGGGCACTTGACC -3'

Posted On

2021-11-19