Mutagenetix > Incidental Mutation

Incidental Mutation 'R9085:Siglecg'

690529

Institutional Source

Beutler Lab

Gene Symbol

Siglecg

Ensembl Gene

ENSMUSG00000030468

Gene Name

sialic acid binding Ig-like lectin G

Synonyms

mSiglec-G, A630096C01Rik

MMRRC Submission

068904-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.077) question?

Stock #

R9085 (G1)

Quality Score

216.009

Status

Not validated

Chromosome

Chromosomal Location

43408204-43418358 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 43411625 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 374 (V374A)

Ref Sequence

ENSEMBL: ENSMUSP00000005592 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000005592]

AlphaFold

Q80ZE3

Predicted Effect

probably benign
Transcript: ENSMUST00000005592
AA Change: V374A

PolyPhen 2 Score 0.241 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000005592
Gene: ENSMUSG00000030468
AA Change: V374A

Domain	Start	End	E-Value	Type
signal peptide	1	17	N/A	INTRINSIC
IG	27	139	5.21e-2	SMART
IG_like	148	232	8.97e0	SMART
IGc2	262	325	3.38e-10	SMART
IGc2	366	427	8.26e-5	SMART
low complexity region	473	480	N/A	INTRINSIC
transmembrane domain	545	564	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.0%

Validation Efficiency

100% (72/72)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] SIGLECs are members of the immunoglobulin superfamily that are expressed on the cell surface. Most SIGLECs have 1 or more cytoplasmic immune receptor tyrosine-based inhibitory motifs, or ITIMs. SIGLECs are typically expressed on cells of the innate immune system, with the exception of the B-cell expressed SIGLEC6 (MIM 604405).[supplied by OMIM, Jul 2002]
PHENOTYPE: Mice homozygous for a null allele exhibit increased B-1 cell numbers, increased IgM levels and IgM-producing plasma cells, and produce more IgM autoantibodies. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 72 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Afg1l	G	A	10: 42,318,641	T385M	probably damaging	Het
Arhgap29	T	A	3: 122,014,600	D1142E	probably benign	Het
Ash1l	C	T	3: 88,981,987	A391V	probably benign	Het
Ash1l	T	C	3: 88,984,222	V1136A	probably benign	Het
Cacna1c	G	T	6: 118,638,505	Y1308*	probably null	Het
Cacna1g	A	T	11: 94,443,220	V865E	probably benign	Het
Cbx2	C	T	11: 119,029,088	T493M	possibly damaging	Het
Cyp2a12	T	C	7: 27,036,519	F451S	probably damaging	Het
Dlec1	G	T	9: 119,124,184	C572F	probably damaging	Het
Dmtn	A	G	14: 70,616,094	S92P	probably damaging	Het
Dnah10	T	C	5: 124,762,173	L1225P		Het
Dnah2	G	T	11: 69,429,398	H3954Q	possibly damaging	Het
Dntt	C	T	19: 41,055,781	R462C	probably damaging	Het
Emc1	T	C	4: 139,367,163	Y676H	possibly damaging	Het
Epb41l4b	A	T	4: 57,041,064		probably null	Het
Fer	T	A	17: 63,921,772	M214K	probably damaging	Het
Fgf17	A	G	14: 70,636,996	F129L	probably damaging	Het
Foxn3	C	T	12: 99,388,836	S23N	probably damaging	Het
Frmd4b	A	C	6: 97,292,373	S993A	probably benign	Het
Gdap1l1	T	C	2: 163,438,588	W15R	probably damaging	Het
Gm11397	T	C	13: 33,397,798	Y113H	probably damaging	Het
Gm884	A	G	11: 103,616,739	Y1468H	unknown	Het
Golga5	T	A	12: 102,492,217	S640T	probably benign	Het
Gucy2g	A	T	19: 55,233,165	Y301*	probably null	Het
Il31ra	T	C	13: 112,524,094	S654G		Het
Lmnb2	T	C	10: 80,904,257	D442G	probably benign	Het
Lpin1	T	C	12: 16,573,714	Y223C		Het
Mast3	A	T	8: 70,796,717	W53R	unknown	Het
Mettl2	T	C	11: 105,130,448	V180A	possibly damaging	Het
Mkl2	A	C	16: 13,412,228	T926P	probably damaging	Het
Mospd3	C	T	5: 137,600,608		probably benign	Het
Mrpl18	A	T	17: 12,915,695	V61E	probably damaging	Het
Muc2	T	A	7: 141,700,489	C154S	probably damaging	Het
Mypn	T	G	10: 63,148,115		probably null	Het
Nelfb	C	T	2: 25,204,280	C357Y	probably damaging	Het
Nes	T	G	3: 87,979,762	V1776G	possibly damaging	Het
Nin	T	A	12: 70,030,012	R1797*	probably null	Het
Nxpe2	A	T	9: 48,339,572	I25K	probably benign	Het
Olfr1238	A	G	2: 89,406,297	S261P	probably damaging	Het
Olfr994	T	A	2: 85,430,275	T185S	probably benign	Het
Osbpl1a	T	C	18: 12,929,036	H60R	probably damaging	Het
Papss1	C	A	3: 131,619,056	H425N	probably damaging	Het
Pde4dip	T	C	3: 97,694,069	N2344S	probably benign	Het
Pde6c	G	A	19: 38,178,121	V704I	probably benign	Het
Pknox1	C	T	17: 31,603,255	T332M	possibly damaging	Het
Pla2r1	A	T	2: 60,425,447	V1251D	probably damaging	Het
Plch2	T	C	4: 155,000,519	D321G	probably damaging	Het
Plec	A	G	15: 76,173,075	S4221P	probably damaging	Het
Psg23	T	G	7: 18,614,735	N49T	possibly damaging	Het
Qrfpr	A	G	3: 36,221,950	F97S	probably damaging	Het
Rab3ip	G	A	10: 116,939,405	S16L	probably damaging	Het
Rbm43	A	G	2: 51,934,918		probably benign	Het
Rpgrip1l	T	C	8: 91,287,675	N314D	possibly damaging	Het
Rpn2	C	T	2: 157,283,647	T26I	possibly damaging	Het
Rsph6a	A	T	7: 19,065,325	N294Y	probably damaging	Het
Sesn1	C	T	10: 41,810,839		probably benign	Het
Sh3d19	T	C	3: 86,126,685	Y782H	probably damaging	Het
Sh3rf1	C	A	8: 61,349,459	D275E	probably benign	Het
Slc6a11	A	T	6: 114,225,847	I301F	probably damaging	Het
Spock1	A	T	13: 57,423,143	F348I	unknown	Het
Sptlc2	T	C	12: 87,336,065	K422E	probably benign	Het
Tas2r115	A	T	6: 132,737,364	V208E	probably benign	Het
Tmem132a	G	T	19: 10,866,471	Q174K	probably damaging	Het
Tmtc1	A	T	6: 148,336,251	Y338*	probably null	Het
Tnfaip1	G	T	11: 78,530,139	L32I	probably damaging	Het
Tox2	T	C	2: 163,225,561	C67R	probably benign	Het
Ube2o	C	T	11: 116,545,383	G311S	probably damaging	Het
Unc13d	AATGCCTCCCATGCC	AATGCCTCCCATGCCTCCCATGCC	11: 116,068,172		probably benign	Het
Vav3	C	T	3: 109,506,406	A220V	probably benign	Het
Xaf1	A	G	11: 72,306,593	K132E	probably benign	Het
Zeb1	T	C	18: 5,766,716	L409S	probably damaging	Het
Zfp51	T	A	17: 21,464,398	L425H	probably damaging	Het

Other mutations in Siglecg

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00528:Siglecg	APN	7	43409057	missense	possibly damaging	0.64
IGL00556:Siglecg	APN	7	43411795	missense	probably benign	0.02
IGL01806:Siglecg	APN	7	43411464	splice site	probably null
IGL01947:Siglecg	APN	7	43408763	missense	probably benign	0.43
IGL02257:Siglecg	APN	7	43411904	missense	probably benign	0.00
IGL02410:Siglecg	APN	7	43408829	missense	probably damaging	0.99
IGL02454:Siglecg	APN	7	43408895	missense	probably benign	0.00
Chamonix	UTSW	7	43409422	missense	possibly damaging	0.91
Dollywood	UTSW	7	43411099	missense	probably damaging	1.00
glowworm	UTSW	7	43408579	missense	probably benign	0.04
Montblanc	UTSW	7	43411386	intron	probably benign
Shenandoah	UTSW	7	43408802	missense	probably damaging	0.99
shenandoah2	UTSW	7	43412017	missense	possibly damaging	0.82
Sherando	UTSW	7	43409057	missense	possibly damaging	0.64
Smokies	UTSW	7	43409279	missense	probably benign	0.02
IGL02988:Siglecg	UTSW	7	43418052	missense	probably damaging	1.00
R0134:Siglecg	UTSW	7	43411171	missense	probably damaging	1.00
R0225:Siglecg	UTSW	7	43411171	missense	probably damaging	1.00
R0480:Siglecg	UTSW	7	43411126	missense	probably benign	0.42
R1538:Siglecg	UTSW	7	43417889	missense	possibly damaging	0.53
R1681:Siglecg	UTSW	7	43408941	missense	probably benign	0.17
R2358:Siglecg	UTSW	7	43409422	missense	possibly damaging	0.91
R4428:Siglecg	UTSW	7	43417926	missense	possibly damaging	0.84
R4429:Siglecg	UTSW	7	43417926	missense	possibly damaging	0.84
R4736:Siglecg	UTSW	7	43417908	missense	probably benign	0.03
R4754:Siglecg	UTSW	7	43411871	intron	probably benign
R5017:Siglecg	UTSW	7	43411386	intron	probably benign
R5713:Siglecg	UTSW	7	43408802	missense	probably damaging	0.99
R5777:Siglecg	UTSW	7	43409413	missense	possibly damaging	0.80
R5892:Siglecg	UTSW	7	43412204	intron	probably benign
R6153:Siglecg	UTSW	7	43412017	missense	possibly damaging	0.82
R6154:Siglecg	UTSW	7	43412017	missense	possibly damaging	0.82
R6331:Siglecg	UTSW	7	43408754	missense	possibly damaging	0.83
R6562:Siglecg	UTSW	7	43409057	missense	possibly damaging	0.64
R6749:Siglecg	UTSW	7	43408979	missense	probably benign	0.00
R7066:Siglecg	UTSW	7	43411742	missense	probably benign	0.40
R7884:Siglecg	UTSW	7	43409279	missense	probably benign	0.02
R8275:Siglecg	UTSW	7	43412468	missense	probably benign
R8554:Siglecg	UTSW	7	43408896	missense	probably benign	0.01
R8846:Siglecg	UTSW	7	43412518	missense	probably benign	0.02
R8873:Siglecg	UTSW	7	43418024	missense	probably benign	0.00
R8887:Siglecg	UTSW	7	43408584	missense	probably benign	0.18
R9012:Siglecg	UTSW	7	43411099	missense	probably damaging	1.00
R9032:Siglecg	UTSW	7	43411625	missense	probably benign	0.24
R9048:Siglecg	UTSW	7	43408579	missense	probably benign	0.04
R9313:Siglecg	UTSW	7	43412432	missense	probably benign	0.03
R9320:Siglecg	UTSW	7	43409429	missense	probably benign	0.33
R9745:Siglecg	UTSW	7	43418052	missense	probably damaging	0.98
RF006:Siglecg	UTSW	7	43408864	nonsense	probably null
Z1177:Siglecg	UTSW	7	43412022	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GACCTGAGAGTGACTGTTTCCC -3'
(R):5'- ACTCACAGTGCACAGAGAGG -3'

Sequencing Primer
(F):5'- GTGACTGTTTCCCAAGCAAACAGG -3'
(R):5'- GCTCAGAGAGATGCGCTG -3'

Posted On

2021-12-30