Incidental Mutation 'R9087:Cftr'
ID 690671
Institutional Source Beutler Lab
Gene Symbol Cftr
Ensembl Gene ENSMUSG00000041301
Gene Name cystic fibrosis transmembrane conductance regulator
Synonyms Abcc7
MMRRC Submission 068906-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.220) question?
Stock # R9087 (G1)
Quality Score 225.009
Status Not validated
Chromosome 6
Chromosomal Location 18170686-18322767 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to C at 18214180 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Leucine at position 119 (I119L)
Ref Sequence ENSEMBL: ENSMUSP00000049228 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000045706] [ENSMUST00000115405] [ENSMUST00000115406] [ENSMUST00000129452] [ENSMUST00000140407]
AlphaFold P26361
PDB Structure mouse CFTR NBD1 with AMP.PNP [X-RAY DIFFRACTION]
Cystic fibrosis transmembrane conductance regulator (CFTR) nucleotide-binding domain one (NBD1) apo [X-RAY DIFFRACTION]
Cystic fibrosis transmembrane conductance regulator (CFTR) nucleotide-binding domain one (NBD1) with ATP [X-RAY DIFFRACTION]
Cystic fibrosis transmembrane conductance regulator (CFTR) nucleotide-binding domain one (NBD1) with ADP [X-RAY DIFFRACTION]
Phosphorylated Cystic fibrosis transmembrane conductance regulator (CFTR) nucleotide-binding domain one (NBD1) with ATP [X-RAY DIFFRACTION]
Cystic fibrosis transmembrane conductance regulator (CFTR) nucleotide-binding domain one (NBD1) with ATP, I4122 space group [X-RAY DIFFRACTION]
Structure of NBD1 from murine CFTR- F508S mutant [X-RAY DIFFRACTION]
Structure of NBD1 from murine CFTR- F508R mutant [X-RAY DIFFRACTION]
The crystal structure of the NBD1 domain of the mouse CFTR protein, deltaF508 mutant [X-RAY DIFFRACTION]
Predicted Effect possibly damaging
Transcript: ENSMUST00000045706
AA Change: I119L

PolyPhen 2 Score 0.910 (Sensitivity: 0.81; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000049228
Gene: ENSMUSG00000041301
AA Change: I119L

DomainStartEndE-ValueType
Pfam:ABC_membrane 81 350 3.7e-40 PFAM
AAA 450 623 2.16e-12 SMART
Pfam:CFTR_R 639 844 2e-93 PFAM
Pfam:ABC_membrane 857 1142 2.7e-53 PFAM
AAA 1232 1414 9.94e-12 SMART
low complexity region 1465 1474 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000115405
AA Change: I119L

PolyPhen 2 Score 0.890 (Sensitivity: 0.82; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000111064
Gene: ENSMUSG00000041301
AA Change: I119L

DomainStartEndE-ValueType
Pfam:ABC_membrane 81 350 1.4e-48 PFAM
Pfam:ABC_tran 441 570 2.3e-19 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000115406
AA Change: I119L

PolyPhen 2 Score 0.910 (Sensitivity: 0.81; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000111065
Gene: ENSMUSG00000041301
AA Change: I119L

DomainStartEndE-ValueType
Pfam:ABC_membrane 81 167 4e-14 PFAM
Pfam:ABC_membrane 162 320 2.5e-20 PFAM
AAA 420 593 2.16e-12 SMART
Pfam:CFTR_R 609 815 1.3e-97 PFAM
Pfam:ABC_membrane 827 1112 1e-50 PFAM
AAA 1202 1384 9.94e-12 SMART
low complexity region 1435 1444 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000129452
AA Change: I119L

PolyPhen 2 Score 0.910 (Sensitivity: 0.81; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000115334
Gene: ENSMUSG00000041301
AA Change: I119L

DomainStartEndE-ValueType
Pfam:ABC_membrane 81 350 3.9e-39 PFAM
Pfam:ABC_tran 441 528 5.6e-11 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000140407
AA Change: I119L

PolyPhen 2 Score 0.890 (Sensitivity: 0.82; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000116957
Gene: ENSMUSG00000041301
AA Change: I119L

DomainStartEndE-ValueType
Pfam:ABC_membrane 81 350 1.2e-48 PFAM
Pfam:ABC_tran 441 568 6.3e-20 PFAM
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.6%
Validation Efficiency
MGI Phenotype FUNCTION: The membrane-associated protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the MRP subfamily which is involved in multi-drug resistance. This gene encodes the cystic fibrosis transmembrane regulator and a chloride channel that controls the regulation of other transport pathways. Mutations in this gene have been associated with autosomal recessive disorders such as cystic fibrosis and congenital bilateral aplasia of the vas deferens. Alternative splicing of exons 4, 5, and 11 have been observed, but full-length transcripts have not yet been fully described. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygotes for targeted null mutations exhibit high mortality associated with intestinal obstruction, and altered mucous and serous glands. Mutants, like humans with cystic fibrosis, also exhibit defective epithelial chloride transport. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 86 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aars1 A G 8: 111,768,169 (GRCm39) D180G probably damaging Het
Abcb6 A T 1: 75,150,211 (GRCm39) I649K probably damaging Het
Ace T C 11: 105,872,745 (GRCm39) F969S probably damaging Het
Ankrd26 A G 6: 118,536,230 (GRCm39) probably null Het
Apobec1 A T 6: 122,558,700 (GRCm39) L9* probably null Het
Atp13a1 A G 8: 70,256,457 (GRCm39) D865G probably damaging Het
Barhl1 T C 2: 28,805,231 (GRCm39) Y154C probably damaging Het
Bbx T C 16: 50,094,998 (GRCm39) D106G probably damaging Het
Cacna1a G A 8: 85,365,432 (GRCm39) A2192T probably benign Het
Cacnb1 T C 11: 97,893,833 (GRCm39) N563S possibly damaging Het
Capn5 A T 7: 97,775,531 (GRCm39) I470N probably damaging Het
Cd300c T C 11: 114,850,591 (GRCm39) T71A probably damaging Het
Celf4 T A 18: 25,637,327 (GRCm39) S223C probably damaging Het
Cmya5 T C 13: 93,233,711 (GRCm39) E459G possibly damaging Het
Cntn2 A G 1: 132,453,108 (GRCm39) Y395H probably damaging Het
Cntnap3 T C 13: 64,899,532 (GRCm39) D987G probably damaging Het
Col5a2 T A 1: 45,481,818 (GRCm39) D102V unknown Het
Cpeb2 T C 5: 43,438,461 (GRCm39) F812L Het
Cpsf3 T A 12: 21,358,995 (GRCm39) L565Q probably damaging Het
Ctnnd1 A C 2: 84,439,922 (GRCm39) L796R probably damaging Het
Dach1 A G 14: 98,406,267 (GRCm39) L160P probably benign Het
Dennd1a A C 2: 37,911,366 (GRCm39) probably null Het
Dnah12 T C 14: 26,546,503 (GRCm39) I2431T probably damaging Het
Ep400 A T 5: 110,815,430 (GRCm39) Y2887* probably null Het
Erich1 T C 8: 14,083,623 (GRCm39) D149G probably damaging Het
Fut2 T C 7: 45,300,493 (GRCm39) N93S probably damaging Het
Gba2 C T 4: 43,568,304 (GRCm39) A688T probably benign Het
Gcm2 C G 13: 41,263,406 (GRCm39) E9Q Het
Gfod1 T C 13: 43,353,838 (GRCm39) E379G probably damaging Het
Gfod2 A G 8: 106,454,851 (GRCm39) F10L probably damaging Het
Gm4871 T G 5: 144,969,088 (GRCm39) H75P possibly damaging Het
Gtpbp3 T A 8: 71,944,999 (GRCm39) V418E probably benign Het
Hif1a T A 12: 73,989,099 (GRCm39) I688K probably benign Het
Ifi44 G T 3: 151,451,517 (GRCm39) S196R probably damaging Het
Igfn1 T C 1: 135,902,606 (GRCm39) probably null Het
Itpr3 G A 17: 27,337,651 (GRCm39) probably benign Het
Kl A G 5: 150,911,957 (GRCm39) K569E probably benign Het
Klkb1 G A 8: 45,728,515 (GRCm39) Q415* probably null Het
L1td1 A G 4: 98,624,699 (GRCm39) D298G possibly damaging Het
L2hgdh C T 12: 69,749,131 (GRCm39) R252Q probably benign Het
Lipc C G 9: 70,709,390 (GRCm39) K452N probably benign Het
Lrp10 C A 14: 54,705,621 (GRCm39) S270R probably damaging Het
Ly6e T G 15: 74,829,649 (GRCm39) L14R probably benign Het
Mast3 T C 8: 71,242,330 (GRCm39) D90G possibly damaging Het
Mmp27 T C 9: 7,579,858 (GRCm39) F444S probably damaging Het
Mrgpra2b A T 7: 47,114,518 (GRCm39) N71K probably benign Het
Nbea C A 3: 55,550,157 (GRCm39) probably null Het
Ndufb10 A G 17: 24,943,159 (GRCm39) probably null Het
Ndufb9 C T 15: 58,811,151 (GRCm39) P146S probably benign Het
Nhsl1 T C 10: 18,407,030 (GRCm39) V1388A probably damaging Het
Nomo1 C A 7: 45,732,748 (GRCm39) D1170E probably benign Het
Nop2 G T 6: 125,114,391 (GRCm39) R254L probably benign Het
Nup160 A T 2: 90,514,429 (GRCm39) T126S probably benign Het
Opa1 A G 16: 29,437,053 (GRCm39) D654G probably damaging Het
Or1j15 T C 2: 36,459,345 (GRCm39) L245P probably damaging Het
Or2j6 A T 7: 139,980,547 (GRCm39) C137* probably null Het
Or51h1 A G 7: 102,308,964 (GRCm39) K312R probably benign Het
Or52e8b C T 7: 104,673,910 (GRCm39) W92* probably null Het
Or5aq1b A G 2: 86,902,299 (GRCm39) Y60H probably damaging Het
Or5p68 A G 7: 107,945,958 (GRCm39) S77P probably damaging Het
Or8b52 A G 9: 38,576,711 (GRCm39) L143P probably damaging Het
Or8k18 A G 2: 86,085,380 (GRCm39) M219T probably benign Het
Osbp2 T A 11: 3,667,976 (GRCm39) D7V probably damaging Het
Osr2 A T 15: 35,301,010 (GRCm39) I189F probably damaging Het
Pdlim5 A G 3: 142,058,594 (GRCm39) V50A possibly damaging Het
Pik3r3 A G 4: 116,148,931 (GRCm39) N334S probably benign Het
Plk5 C G 10: 80,193,830 (GRCm39) R40G probably damaging Het
Ppfia4 A G 1: 134,240,326 (GRCm39) I889T probably damaging Het
Prpf38b T C 3: 108,811,657 (GRCm39) K403E unknown Het
Rgs20 T G 1: 4,994,190 (GRCm39) E31A possibly damaging Het
Rpl11 A T 4: 135,780,000 (GRCm39) M12K possibly damaging Het
Rreb1 C A 13: 38,115,644 (GRCm39) T1001K probably benign Het
Ruvbl1 A G 6: 88,474,355 (GRCm39) K453E probably benign Het
Sdc4 A T 2: 164,270,959 (GRCm39) V100D probably benign Het
Simc1 C A 13: 54,672,147 (GRCm39) T165K probably benign Het
Slc2a3 A G 6: 122,717,408 (GRCm39) V16A probably benign Het
Smbd1 A T 16: 32,627,130 (GRCm39) S53T possibly damaging Het
Smndc1 A T 19: 53,372,074 (GRCm39) N113K possibly damaging Het
Tas2r139 T G 6: 42,118,168 (GRCm39) F100C probably damaging Het
Tubgcp5 A G 7: 55,467,106 (GRCm39) Y692C probably damaging Het
Ube2d2a T C 18: 35,933,197 (GRCm39) I78T probably benign Het
Ugt2b37 C T 5: 87,401,996 (GRCm39) V212I probably benign Het
Wars2 A G 3: 99,124,063 (GRCm39) D308G possibly damaging Het
Yeats2 G A 16: 20,030,500 (GRCm39) probably null Het
Zfp385a G T 15: 103,224,318 (GRCm39) H219N possibly damaging Het
Zfp407 T C 18: 84,227,982 (GRCm39) T1876A probably damaging Het
Other mutations in Cftr
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00901:Cftr APN 6 18,268,429 (GRCm39) critical splice donor site probably null
IGL01082:Cftr APN 6 18,226,102 (GRCm39) missense probably damaging 0.97
IGL01113:Cftr APN 6 18,270,252 (GRCm39) missense probably damaging 1.00
IGL01383:Cftr APN 6 18,226,040 (GRCm39) missense probably benign 0.00
IGL01595:Cftr APN 6 18,198,238 (GRCm39) splice site probably benign
IGL01820:Cftr APN 6 18,226,138 (GRCm39) missense probably damaging 1.00
IGL02223:Cftr APN 6 18,221,481 (GRCm39) missense probably damaging 1.00
IGL02249:Cftr APN 6 18,277,870 (GRCm39) missense possibly damaging 0.58
IGL02439:Cftr APN 6 18,258,237 (GRCm39) nonsense probably null
IGL02537:Cftr APN 6 18,274,596 (GRCm39) missense probably benign 0.31
IGL03234:Cftr APN 6 18,225,987 (GRCm39) missense probably damaging 0.96
BB004:Cftr UTSW 6 18,267,970 (GRCm39) missense possibly damaging 0.81
BB014:Cftr UTSW 6 18,267,970 (GRCm39) missense possibly damaging 0.81
PIT4453001:Cftr UTSW 6 18,214,105 (GRCm39) missense probably damaging 0.99
PIT4520001:Cftr UTSW 6 18,277,842 (GRCm39) missense probably benign 0.01
R0114:Cftr UTSW 6 18,282,447 (GRCm39) missense probably damaging 1.00
R0329:Cftr UTSW 6 18,226,096 (GRCm39) missense probably null 1.00
R0330:Cftr UTSW 6 18,226,096 (GRCm39) missense probably null 1.00
R0331:Cftr UTSW 6 18,235,225 (GRCm39) missense possibly damaging 0.72
R0480:Cftr UTSW 6 18,274,517 (GRCm39) splice site probably benign
R0612:Cftr UTSW 6 18,198,125 (GRCm39) missense probably benign 0.01
R0633:Cftr UTSW 6 18,305,979 (GRCm39) missense probably damaging 0.99
R0830:Cftr UTSW 6 18,270,224 (GRCm39) missense probably benign 0.02
R1559:Cftr UTSW 6 18,225,936 (GRCm39) missense probably benign 0.01
R1629:Cftr UTSW 6 18,226,105 (GRCm39) missense probably damaging 1.00
R1636:Cftr UTSW 6 18,226,156 (GRCm39) missense probably damaging 0.99
R1860:Cftr UTSW 6 18,268,288 (GRCm39) missense probably benign 0.00
R2043:Cftr UTSW 6 18,320,934 (GRCm39) missense probably benign
R2211:Cftr UTSW 6 18,214,279 (GRCm39) missense probably null 0.13
R4737:Cftr UTSW 6 18,299,882 (GRCm39) missense probably benign 0.19
R4793:Cftr UTSW 6 18,226,087 (GRCm39) missense probably damaging 1.00
R4857:Cftr UTSW 6 18,320,974 (GRCm39) missense possibly damaging 0.92
R4984:Cftr UTSW 6 18,235,198 (GRCm39) missense possibly damaging 0.89
R4999:Cftr UTSW 6 18,221,613 (GRCm39) missense probably benign 0.17
R5045:Cftr UTSW 6 18,230,080 (GRCm39) missense probably benign 0.20
R5183:Cftr UTSW 6 18,299,832 (GRCm39) missense probably damaging 0.99
R5197:Cftr UTSW 6 18,255,413 (GRCm39) missense probably benign 0.00
R5288:Cftr UTSW 6 18,226,128 (GRCm39) nonsense probably null
R5337:Cftr UTSW 6 18,319,058 (GRCm39) missense probably damaging 1.00
R5549:Cftr UTSW 6 18,227,953 (GRCm39) missense probably benign 0.00
R5596:Cftr UTSW 6 18,268,095 (GRCm39) missense probably benign 0.00
R5651:Cftr UTSW 6 18,255,364 (GRCm39) splice site probably null
R5660:Cftr UTSW 6 18,313,686 (GRCm39) missense probably benign 0.22
R5941:Cftr UTSW 6 18,313,645 (GRCm39) missense probably damaging 1.00
R6221:Cftr UTSW 6 18,282,500 (GRCm39) missense probably benign 0.00
R6222:Cftr UTSW 6 18,282,500 (GRCm39) missense probably benign 0.00
R6229:Cftr UTSW 6 18,220,683 (GRCm39) missense probably damaging 1.00
R6256:Cftr UTSW 6 18,274,660 (GRCm39) missense probably damaging 0.96
R6257:Cftr UTSW 6 18,282,500 (GRCm39) missense probably benign 0.00
R6412:Cftr UTSW 6 18,285,603 (GRCm39) missense probably damaging 0.97
R6459:Cftr UTSW 6 18,258,235 (GRCm39) missense probably damaging 1.00
R6558:Cftr UTSW 6 18,222,527 (GRCm39) missense probably damaging 1.00
R6724:Cftr UTSW 6 18,255,973 (GRCm39) nonsense probably null
R6787:Cftr UTSW 6 18,274,607 (GRCm39) nonsense probably null
R6861:Cftr UTSW 6 18,268,107 (GRCm39) missense probably benign 0.00
R6888:Cftr UTSW 6 18,313,729 (GRCm39) critical splice donor site probably null
R7084:Cftr UTSW 6 18,226,137 (GRCm39) missense probably benign 0.17
R7105:Cftr UTSW 6 18,318,971 (GRCm39) missense probably damaging 1.00
R7320:Cftr UTSW 6 18,319,012 (GRCm39) missense probably damaging 0.97
R7359:Cftr UTSW 6 18,221,623 (GRCm39) missense probably benign 0.00
R7466:Cftr UTSW 6 18,227,972 (GRCm39) missense probably benign
R7502:Cftr UTSW 6 18,214,295 (GRCm39) missense probably damaging 1.00
R7748:Cftr UTSW 6 18,277,888 (GRCm39) critical splice donor site probably null
R7808:Cftr UTSW 6 18,204,204 (GRCm39) missense probably benign
R7817:Cftr UTSW 6 18,267,967 (GRCm39) missense probably damaging 0.97
R7927:Cftr UTSW 6 18,267,970 (GRCm39) missense possibly damaging 0.81
R7968:Cftr UTSW 6 18,226,048 (GRCm39) missense probably benign 0.00
R7995:Cftr UTSW 6 18,214,155 (GRCm39) missense probably damaging 1.00
R8171:Cftr UTSW 6 18,258,287 (GRCm39) missense probably damaging 1.00
R8210:Cftr UTSW 6 18,220,696 (GRCm39) missense probably damaging 1.00
R8548:Cftr UTSW 6 18,273,698 (GRCm39) missense possibly damaging 0.87
R8712:Cftr UTSW 6 18,274,696 (GRCm39) missense probably damaging 0.99
R8737:Cftr UTSW 6 18,319,728 (GRCm39) missense probably damaging 1.00
R8926:Cftr UTSW 6 18,268,003 (GRCm39) missense possibly damaging 0.83
R8979:Cftr UTSW 6 18,227,947 (GRCm39) missense probably benign 0.10
R8996:Cftr UTSW 6 18,255,945 (GRCm39) nonsense probably null
R9115:Cftr UTSW 6 18,235,310 (GRCm39) missense probably damaging 1.00
R9406:Cftr UTSW 6 18,299,866 (GRCm39) missense probably benign 0.00
R9689:Cftr UTSW 6 18,313,649 (GRCm39) missense probably damaging 0.99
R9700:Cftr UTSW 6 18,268,359 (GRCm39) missense probably damaging 1.00
R9747:Cftr UTSW 6 18,285,636 (GRCm39) missense possibly damaging 0.52
Predicted Primers
Posted On 2021-12-30