Incidental Mutation 'R9087:Zfp407'
ID 690728
Institutional Source Beutler Lab
Gene Symbol Zfp407
Ensembl Gene ENSMUSG00000048410
Gene Name zinc finger protein 407
Synonyms LOC381139, 6430585N13Rik, LOC240469
MMRRC Submission 068906-MU
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # R9087 (G1)
Quality Score 225.009
Status Not validated
Chromosome 18
Chromosomal Location 84225826-84612815 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 84227982 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 1876 (T1876A)
Ref Sequence ENSEMBL: ENSMUSP00000118361 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000125763]
AlphaFold G3UVV3
Predicted Effect probably benign
Transcript: ENSMUST00000125450
Predicted Effect probably damaging
Transcript: ENSMUST00000125763
AA Change: T1876A

PolyPhen 2 Score 0.962 (Sensitivity: 0.78; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000118361
Gene: ENSMUSG00000048410
AA Change: T1876A

DomainStartEndE-ValueType
low complexity region 20 37 N/A INTRINSIC
ZnF_C2H2 178 200 8.67e-1 SMART
ZnF_U1 233 267 6.79e-1 SMART
ZnF_C2H2 236 260 4.65e-1 SMART
ZnF_C2H2 522 545 7.05e-1 SMART
ZnF_U1 548 582 1.54e1 SMART
ZnF_C2H2 551 575 1.01e-1 SMART
ZnF_C2H2 582 605 1.41e0 SMART
ZnF_U1 606 639 2.22e0 SMART
ZnF_C2H2 609 632 1.01e2 SMART
ZnF_C2H2 695 718 6.23e-2 SMART
ZnF_U1 721 755 2.96e0 SMART
ZnF_C2H2 724 748 7.11e0 SMART
ZnF_C2H2 840 863 7.55e-1 SMART
ZnF_U1 866 900 3.81e-1 SMART
ZnF_C2H2 869 893 1.07e0 SMART
ZnF_C2H2 1009 1032 6.13e-1 SMART
ZnF_U1 1035 1069 2.22e0 SMART
ZnF_C2H2 1038 1062 5.62e0 SMART
low complexity region 1223 1234 N/A INTRINSIC
ZnF_C2H2 1405 1428 5.92e0 SMART
ZnF_U1 1432 1466 2.35e0 SMART
ZnF_C2H2 1435 1459 1.76e-1 SMART
ZnF_C2H2 1477 1500 5.42e-2 SMART
ZnF_C2H2 1528 1552 1.68e1 SMART
ZnF_C2H2 1558 1580 1.43e-1 SMART
ZnF_C2H2 1586 1609 9.58e-3 SMART
ZnF_C2H2 1619 1641 2.61e-4 SMART
ZnF_C2H2 1647 1671 1.04e-3 SMART
ZnF_C2H2 1677 1699 9.44e-2 SMART
ZnF_C2H2 1705 1727 1.82e-3 SMART
ZnF_C2H2 1733 1758 4.65e-1 SMART
ZnF_C2H2 1764 1787 1.26e-2 SMART
low complexity region 1876 1887 N/A INTRINSIC
low complexity region 2017 2032 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.6%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a zinc finger protein whose exact function is not known. It may be involved in transcriptional regulation. Several alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2009]
Allele List at MGI
Other mutations in this stock
Total: 86 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aars1 A G 8: 111,768,169 (GRCm39) D180G probably damaging Het
Abcb6 A T 1: 75,150,211 (GRCm39) I649K probably damaging Het
Ace T C 11: 105,872,745 (GRCm39) F969S probably damaging Het
Ankrd26 A G 6: 118,536,230 (GRCm39) probably null Het
Apobec1 A T 6: 122,558,700 (GRCm39) L9* probably null Het
Atp13a1 A G 8: 70,256,457 (GRCm39) D865G probably damaging Het
Barhl1 T C 2: 28,805,231 (GRCm39) Y154C probably damaging Het
Bbx T C 16: 50,094,998 (GRCm39) D106G probably damaging Het
Cacna1a G A 8: 85,365,432 (GRCm39) A2192T probably benign Het
Cacnb1 T C 11: 97,893,833 (GRCm39) N563S possibly damaging Het
Capn5 A T 7: 97,775,531 (GRCm39) I470N probably damaging Het
Cd300c T C 11: 114,850,591 (GRCm39) T71A probably damaging Het
Celf4 T A 18: 25,637,327 (GRCm39) S223C probably damaging Het
Cftr A C 6: 18,214,180 (GRCm39) I119L possibly damaging Het
Cmya5 T C 13: 93,233,711 (GRCm39) E459G possibly damaging Het
Cntn2 A G 1: 132,453,108 (GRCm39) Y395H probably damaging Het
Cntnap3 T C 13: 64,899,532 (GRCm39) D987G probably damaging Het
Col5a2 T A 1: 45,481,818 (GRCm39) D102V unknown Het
Cpeb2 T C 5: 43,438,461 (GRCm39) F812L Het
Cpsf3 T A 12: 21,358,995 (GRCm39) L565Q probably damaging Het
Ctnnd1 A C 2: 84,439,922 (GRCm39) L796R probably damaging Het
Dach1 A G 14: 98,406,267 (GRCm39) L160P probably benign Het
Dennd1a A C 2: 37,911,366 (GRCm39) probably null Het
Dnah12 T C 14: 26,546,503 (GRCm39) I2431T probably damaging Het
Ep400 A T 5: 110,815,430 (GRCm39) Y2887* probably null Het
Erich1 T C 8: 14,083,623 (GRCm39) D149G probably damaging Het
Fut2 T C 7: 45,300,493 (GRCm39) N93S probably damaging Het
Gba2 C T 4: 43,568,304 (GRCm39) A688T probably benign Het
Gcm2 C G 13: 41,263,406 (GRCm39) E9Q Het
Gfod1 T C 13: 43,353,838 (GRCm39) E379G probably damaging Het
Gfod2 A G 8: 106,454,851 (GRCm39) F10L probably damaging Het
Gm4871 T G 5: 144,969,088 (GRCm39) H75P possibly damaging Het
Gtpbp3 T A 8: 71,944,999 (GRCm39) V418E probably benign Het
Hif1a T A 12: 73,989,099 (GRCm39) I688K probably benign Het
Ifi44 G T 3: 151,451,517 (GRCm39) S196R probably damaging Het
Igfn1 T C 1: 135,902,606 (GRCm39) probably null Het
Itpr3 G A 17: 27,337,651 (GRCm39) probably benign Het
Kl A G 5: 150,911,957 (GRCm39) K569E probably benign Het
Klkb1 G A 8: 45,728,515 (GRCm39) Q415* probably null Het
L1td1 A G 4: 98,624,699 (GRCm39) D298G possibly damaging Het
L2hgdh C T 12: 69,749,131 (GRCm39) R252Q probably benign Het
Lipc C G 9: 70,709,390 (GRCm39) K452N probably benign Het
Lrp10 C A 14: 54,705,621 (GRCm39) S270R probably damaging Het
Ly6e T G 15: 74,829,649 (GRCm39) L14R probably benign Het
Mast3 T C 8: 71,242,330 (GRCm39) D90G possibly damaging Het
Mmp27 T C 9: 7,579,858 (GRCm39) F444S probably damaging Het
Mrgpra2b A T 7: 47,114,518 (GRCm39) N71K probably benign Het
Nbea C A 3: 55,550,157 (GRCm39) probably null Het
Ndufb10 A G 17: 24,943,159 (GRCm39) probably null Het
Ndufb9 C T 15: 58,811,151 (GRCm39) P146S probably benign Het
Nhsl1 T C 10: 18,407,030 (GRCm39) V1388A probably damaging Het
Nomo1 C A 7: 45,732,748 (GRCm39) D1170E probably benign Het
Nop2 G T 6: 125,114,391 (GRCm39) R254L probably benign Het
Nup160 A T 2: 90,514,429 (GRCm39) T126S probably benign Het
Opa1 A G 16: 29,437,053 (GRCm39) D654G probably damaging Het
Or1j15 T C 2: 36,459,345 (GRCm39) L245P probably damaging Het
Or2j6 A T 7: 139,980,547 (GRCm39) C137* probably null Het
Or51h1 A G 7: 102,308,964 (GRCm39) K312R probably benign Het
Or52e8b C T 7: 104,673,910 (GRCm39) W92* probably null Het
Or5aq1b A G 2: 86,902,299 (GRCm39) Y60H probably damaging Het
Or5p68 A G 7: 107,945,958 (GRCm39) S77P probably damaging Het
Or8b52 A G 9: 38,576,711 (GRCm39) L143P probably damaging Het
Or8k18 A G 2: 86,085,380 (GRCm39) M219T probably benign Het
Osbp2 T A 11: 3,667,976 (GRCm39) D7V probably damaging Het
Osr2 A T 15: 35,301,010 (GRCm39) I189F probably damaging Het
Pdlim5 A G 3: 142,058,594 (GRCm39) V50A possibly damaging Het
Pik3r3 A G 4: 116,148,931 (GRCm39) N334S probably benign Het
Plk5 C G 10: 80,193,830 (GRCm39) R40G probably damaging Het
Ppfia4 A G 1: 134,240,326 (GRCm39) I889T probably damaging Het
Prpf38b T C 3: 108,811,657 (GRCm39) K403E unknown Het
Rgs20 T G 1: 4,994,190 (GRCm39) E31A possibly damaging Het
Rpl11 A T 4: 135,780,000 (GRCm39) M12K possibly damaging Het
Rreb1 C A 13: 38,115,644 (GRCm39) T1001K probably benign Het
Ruvbl1 A G 6: 88,474,355 (GRCm39) K453E probably benign Het
Sdc4 A T 2: 164,270,959 (GRCm39) V100D probably benign Het
Simc1 C A 13: 54,672,147 (GRCm39) T165K probably benign Het
Slc2a3 A G 6: 122,717,408 (GRCm39) V16A probably benign Het
Smbd1 A T 16: 32,627,130 (GRCm39) S53T possibly damaging Het
Smndc1 A T 19: 53,372,074 (GRCm39) N113K possibly damaging Het
Tas2r139 T G 6: 42,118,168 (GRCm39) F100C probably damaging Het
Tubgcp5 A G 7: 55,467,106 (GRCm39) Y692C probably damaging Het
Ube2d2a T C 18: 35,933,197 (GRCm39) I78T probably benign Het
Ugt2b37 C T 5: 87,401,996 (GRCm39) V212I probably benign Het
Wars2 A G 3: 99,124,063 (GRCm39) D308G possibly damaging Het
Yeats2 G A 16: 20,030,500 (GRCm39) probably null Het
Zfp385a G T 15: 103,224,318 (GRCm39) H219N possibly damaging Het
Other mutations in Zfp407
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00499:Zfp407 APN 18 84,579,877 (GRCm39) missense probably damaging 0.99
IGL02105:Zfp407 APN 18 84,580,845 (GRCm39) nonsense probably null
IGL02110:Zfp407 APN 18 84,577,165 (GRCm39) missense probably benign 0.00
IGL02343:Zfp407 APN 18 84,227,849 (GRCm39) missense possibly damaging 0.71
IGL02456:Zfp407 APN 18 84,576,766 (GRCm39) missense probably damaging 1.00
IGL02705:Zfp407 APN 18 84,577,156 (GRCm39) nonsense probably null
IGL02946:Zfp407 APN 18 84,578,834 (GRCm39) missense probably damaging 1.00
IGL03069:Zfp407 APN 18 84,369,100 (GRCm39) missense probably damaging 1.00
IGL03145:Zfp407 APN 18 84,227,846 (GRCm39) missense probably damaging 0.99
IGL03403:Zfp407 APN 18 84,578,922 (GRCm39) missense probably damaging 1.00
IGL03134:Zfp407 UTSW 18 84,228,080 (GRCm39) missense probably damaging 0.99
PIT4362001:Zfp407 UTSW 18 84,579,393 (GRCm39) missense possibly damaging 0.87
PIT4520001:Zfp407 UTSW 18 84,450,545 (GRCm39) missense probably damaging 0.99
R0087:Zfp407 UTSW 18 84,578,536 (GRCm39) missense probably damaging 1.00
R0243:Zfp407 UTSW 18 84,576,836 (GRCm39) missense probably damaging 1.00
R0594:Zfp407 UTSW 18 84,580,692 (GRCm39) missense possibly damaging 0.87
R0766:Zfp407 UTSW 18 84,577,898 (GRCm39) missense probably benign 0.14
R0787:Zfp407 UTSW 18 84,227,471 (GRCm39) missense probably benign 0.00
R0787:Zfp407 UTSW 18 84,227,147 (GRCm39) missense probably damaging 1.00
R1065:Zfp407 UTSW 18 84,577,898 (GRCm39) missense probably benign 0.14
R1086:Zfp407 UTSW 18 84,577,898 (GRCm39) missense probably benign 0.14
R1165:Zfp407 UTSW 18 84,577,898 (GRCm39) missense probably benign 0.14
R1186:Zfp407 UTSW 18 84,227,573 (GRCm39) missense probably benign 0.39
R1203:Zfp407 UTSW 18 84,577,898 (GRCm39) missense probably benign 0.14
R1312:Zfp407 UTSW 18 84,577,898 (GRCm39) missense probably benign 0.14
R1345:Zfp407 UTSW 18 84,577,898 (GRCm39) missense probably benign 0.14
R1385:Zfp407 UTSW 18 84,577,898 (GRCm39) missense probably benign 0.14
R1421:Zfp407 UTSW 18 84,577,898 (GRCm39) missense probably benign 0.14
R1430:Zfp407 UTSW 18 84,227,580 (GRCm39) missense probably benign 0.18
R1436:Zfp407 UTSW 18 84,361,196 (GRCm39) splice site probably benign
R1498:Zfp407 UTSW 18 84,577,898 (GRCm39) missense probably benign 0.14
R1526:Zfp407 UTSW 18 84,579,158 (GRCm39) missense possibly damaging 0.61
R1579:Zfp407 UTSW 18 84,227,763 (GRCm39) missense probably benign 0.00
R1594:Zfp407 UTSW 18 84,227,456 (GRCm39) missense probably benign 0.01
R1628:Zfp407 UTSW 18 84,372,658 (GRCm39) missense probably damaging 1.00
R1698:Zfp407 UTSW 18 84,580,282 (GRCm39) missense probably damaging 1.00
R1962:Zfp407 UTSW 18 84,577,461 (GRCm39) missense probably benign 0.01
R1984:Zfp407 UTSW 18 84,577,898 (GRCm39) missense probably benign 0.14
R1985:Zfp407 UTSW 18 84,577,898 (GRCm39) missense probably benign 0.14
R1986:Zfp407 UTSW 18 84,577,898 (GRCm39) missense probably benign 0.14
R2151:Zfp407 UTSW 18 84,227,774 (GRCm39) missense possibly damaging 0.55
R2152:Zfp407 UTSW 18 84,227,774 (GRCm39) missense possibly damaging 0.55
R2154:Zfp407 UTSW 18 84,227,774 (GRCm39) missense possibly damaging 0.55
R2259:Zfp407 UTSW 18 84,227,918 (GRCm39) missense probably damaging 1.00
R2353:Zfp407 UTSW 18 84,578,005 (GRCm39) missense probably damaging 1.00
R2845:Zfp407 UTSW 18 84,576,522 (GRCm39) nonsense probably null
R3407:Zfp407 UTSW 18 84,576,997 (GRCm39) missense probably benign 0.08
R3432:Zfp407 UTSW 18 84,226,871 (GRCm39) missense probably damaging 1.00
R3892:Zfp407 UTSW 18 84,578,477 (GRCm39) missense probably damaging 1.00
R4026:Zfp407 UTSW 18 84,577,721 (GRCm39) missense possibly damaging 0.82
R4107:Zfp407 UTSW 18 84,361,132 (GRCm39) missense possibly damaging 0.82
R4398:Zfp407 UTSW 18 84,580,856 (GRCm39) nonsense probably null
R4447:Zfp407 UTSW 18 84,580,819 (GRCm39) missense possibly damaging 0.95
R4752:Zfp407 UTSW 18 84,581,039 (GRCm39) missense probably benign 0.01
R4881:Zfp407 UTSW 18 84,577,828 (GRCm39) missense probably benign 0.27
R4936:Zfp407 UTSW 18 84,577,589 (GRCm39) missense probably benign 0.00
R5194:Zfp407 UTSW 18 84,579,434 (GRCm39) missense probably benign 0.05
R5243:Zfp407 UTSW 18 84,579,216 (GRCm39) missense probably damaging 1.00
R5258:Zfp407 UTSW 18 84,334,051 (GRCm39) missense probably damaging 1.00
R5591:Zfp407 UTSW 18 84,579,262 (GRCm39) missense probably damaging 1.00
R5633:Zfp407 UTSW 18 84,579,169 (GRCm39) missense probably benign 0.35
R5739:Zfp407 UTSW 18 84,226,867 (GRCm39) makesense probably null
R5806:Zfp407 UTSW 18 84,576,739 (GRCm39) missense probably damaging 1.00
R5820:Zfp407 UTSW 18 84,578,649 (GRCm39) missense probably benign 0.01
R6187:Zfp407 UTSW 18 84,577,134 (GRCm39) missense possibly damaging 0.87
R6512:Zfp407 UTSW 18 84,578,474 (GRCm39) missense probably damaging 1.00
R6521:Zfp407 UTSW 18 84,450,536 (GRCm39) missense probably damaging 1.00
R6748:Zfp407 UTSW 18 84,226,955 (GRCm39) missense probably damaging 0.98
R6882:Zfp407 UTSW 18 84,361,194 (GRCm39) splice site probably null
R6899:Zfp407 UTSW 18 84,579,559 (GRCm39) missense possibly damaging 0.86
R7038:Zfp407 UTSW 18 84,579,982 (GRCm39) missense probably damaging 1.00
R7076:Zfp407 UTSW 18 84,576,601 (GRCm39) missense probably damaging 1.00
R7326:Zfp407 UTSW 18 84,577,167 (GRCm39) missense possibly damaging 0.77
R7397:Zfp407 UTSW 18 84,579,944 (GRCm39) missense possibly damaging 0.59
R7402:Zfp407 UTSW 18 84,579,661 (GRCm39) missense probably benign 0.02
R7783:Zfp407 UTSW 18 84,228,047 (GRCm39) missense possibly damaging 0.69
R7800:Zfp407 UTSW 18 84,578,800 (GRCm39) missense probably damaging 0.99
R7904:Zfp407 UTSW 18 84,579,381 (GRCm39) missense not run
R7942:Zfp407 UTSW 18 84,577,754 (GRCm39) missense probably benign 0.02
R7955:Zfp407 UTSW 18 84,577,416 (GRCm39) missense probably benign 0.02
R7988:Zfp407 UTSW 18 84,577,525 (GRCm39) missense possibly damaging 0.60
R8125:Zfp407 UTSW 18 84,579,310 (GRCm39) missense probably damaging 1.00
R8237:Zfp407 UTSW 18 84,578,269 (GRCm39) missense possibly damaging 0.87
R8364:Zfp407 UTSW 18 84,570,993 (GRCm39) critical splice donor site probably null
R8443:Zfp407 UTSW 18 84,227,987 (GRCm39) missense probably damaging 1.00
R8487:Zfp407 UTSW 18 84,580,895 (GRCm39) nonsense probably null
R8497:Zfp407 UTSW 18 84,578,021 (GRCm39) missense probably damaging 0.98
R8808:Zfp407 UTSW 18 84,361,185 (GRCm39) missense probably benign 0.17
R8848:Zfp407 UTSW 18 84,578,819 (GRCm39) missense probably damaging 1.00
R8913:Zfp407 UTSW 18 84,578,653 (GRCm39) missense probably damaging 0.99
R8962:Zfp407 UTSW 18 84,577,057 (GRCm39) missense probably damaging 1.00
R9452:Zfp407 UTSW 18 84,580,579 (GRCm39) missense probably benign 0.02
R9691:Zfp407 UTSW 18 84,578,312 (GRCm39) missense probably benign 0.03
R9766:Zfp407 UTSW 18 84,577,574 (GRCm39) missense probably benign 0.06
RF003:Zfp407 UTSW 18 84,227,688 (GRCm39) missense probably benign 0.17
Z1177:Zfp407 UTSW 18 84,228,079 (GRCm39) missense probably damaging 0.97
Predicted Primers PCR Primer
(F):5'- GTCCACACTGTGACTTTCCATGG -3'
(R):5'- AGGACAAGGAGCCACGTTTG -3'

Sequencing Primer
(F):5'- ACTGTGACTTTCCATGGAACCC -3'
(R):5'- TTTGTGGAGACAGACAGCCC -3'
Posted On 2021-12-30