Incidental Mutation 'R9088:Nek10'
| ID |
690779 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Nek10
|
| Ensembl Gene |
ENSMUSG00000042567 |
| Gene Name |
NIMA (never in mitosis gene a)- related kinase 10 |
| Synonyms |
LOC238944 |
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R9088 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Not validated
|
| Chromosome |
14 |
| Chromosomal Location |
7457704-7666183 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 14931314 bp (GRCm38)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Isoleucine to Threonine
at position 762
(I762T)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000108249
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000112630]
[ENSMUST00000112631]
[ENSMUST00000224491]
|
| AlphaFold |
Q3UGM2 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000112630
AA Change: I762T
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| SMART Domains |
Protein: ENSMUSP00000108249
Gene: ENSMUSG00000042567
AA Change: I762T
| Domain | Start | End | E-Value | Type |
|---|
|
ARM
|
197 |
238 |
8.23e1 |
SMART |
|
ARM
|
278 |
320 |
5.18e0 |
SMART |
|
low complexity region
|
387 |
400 |
N/A |
INTRINSIC |
|
ARM
|
401 |
448 |
7.09e1 |
SMART |
|
S_TKc
|
519 |
791 |
2.36e-75 |
SMART |
|
low complexity region
|
799 |
811 |
N/A |
INTRINSIC |
|
low complexity region
|
839 |
863 |
N/A |
INTRINSIC |
|
low complexity region
|
908 |
926 |
N/A |
INTRINSIC |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000112631
AA Change: I762T
PolyPhen 2
Score 0.956 (Sensitivity: 0.79; Specificity: 0.95)
|
| SMART Domains |
Protein: ENSMUSP00000108250
Gene: ENSMUSG00000042567
AA Change: I762T
| Domain | Start | End | E-Value | Type |
|---|
|
ARM
|
197 |
238 |
8.23e1 |
SMART |
|
ARM
|
278 |
320 |
5.18e0 |
SMART |
|
low complexity region
|
387 |
400 |
N/A |
INTRINSIC |
|
ARM
|
401 |
448 |
7.09e1 |
SMART |
|
S_TKc
|
519 |
791 |
2.36e-75 |
SMART |
|
low complexity region
|
799 |
811 |
N/A |
INTRINSIC |
|
low complexity region
|
839 |
863 |
N/A |
INTRINSIC |
|
low complexity region
|
908 |
926 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000136826
AA Change: I65T
PolyPhen 2
Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
|
| SMART Domains |
Protein: ENSMUSP00000123151
Gene: ENSMUSG00000042567
AA Change: I65T
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Pkinase
|
1 |
87 |
5.1e-13 |
PFAM |
|
Pfam:Pkinase_Tyr
|
1 |
87 |
4.2e-8 |
PFAM |
|
low complexity region
|
103 |
115 |
N/A |
INTRINSIC |
|
low complexity region
|
143 |
167 |
N/A |
INTRINSIC |
|
low complexity region
|
212 |
230 |
N/A |
INTRINSIC |
|
low complexity region
|
257 |
268 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000224491
AA Change: I762T
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.7%
- 20x: 98.9%
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 59 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Ak9 |
A |
G |
10: 41,282,870 (GRCm39) |
Y1212C |
|
Het |
| Asah2 |
T |
C |
19: 32,030,360 (GRCm39) |
Q104R |
probably damaging |
Het |
| Bnipl |
T |
A |
3: 95,158,295 (GRCm39) |
R9* |
probably null |
Het |
| Bpifa3 |
A |
C |
2: 153,975,685 (GRCm39) |
N85T |
possibly damaging |
Het |
| C6 |
T |
C |
15: 4,792,956 (GRCm39) |
Y354H |
probably damaging |
Het |
| Caln1 |
A |
T |
5: 130,443,617 (GRCm39) |
|
probably benign |
Het |
| Capn3 |
T |
C |
2: 120,321,451 (GRCm39) |
F378L |
probably benign |
Het |
| Car6 |
T |
C |
4: 150,281,806 (GRCm39) |
H125R |
probably damaging |
Het |
| Ccdc110 |
G |
A |
8: 46,394,882 (GRCm39) |
E258K |
probably damaging |
Het |
| Cep295 |
C |
A |
9: 15,233,815 (GRCm39) |
R2327L |
probably benign |
Het |
| Col14a1 |
T |
A |
15: 55,226,923 (GRCm39) |
D224E |
unknown |
Het |
| Col16a1 |
T |
A |
4: 129,971,016 (GRCm39) |
S938T |
unknown |
Het |
| Col4a2 |
A |
G |
8: 11,493,227 (GRCm39) |
E1340G |
possibly damaging |
Het |
| Col6a6 |
C |
T |
9: 105,661,276 (GRCm39) |
V278M |
probably damaging |
Het |
| Crybg2 |
T |
A |
4: 133,799,890 (GRCm39) |
L41Q |
probably damaging |
Het |
| Ctss |
A |
T |
3: 95,436,867 (GRCm39) |
D50V |
possibly damaging |
Het |
| Ddx56 |
C |
T |
11: 6,209,612 (GRCm39) |
A500T |
probably benign |
Het |
| Dmbt1 |
T |
C |
7: 130,718,418 (GRCm39) |
V1713A |
unknown |
Het |
| Dnah1 |
T |
C |
14: 30,987,970 (GRCm39) |
I3483V |
probably benign |
Het |
| E130308A19Rik |
T |
A |
4: 59,737,594 (GRCm39) |
F402I |
probably benign |
Het |
| Eml6 |
A |
T |
11: 29,768,424 (GRCm39) |
H754Q |
probably damaging |
Het |
| Ern2 |
A |
G |
7: 121,772,890 (GRCm39) |
Y576H |
probably damaging |
Het |
| Fat4 |
T |
C |
3: 39,061,448 (GRCm39) |
S4344P |
probably benign |
Het |
| Fbxo40 |
A |
G |
16: 36,790,150 (GRCm39) |
I320T |
|
Het |
| Fbxw22 |
C |
T |
9: 109,207,952 (GRCm39) |
D440N |
probably damaging |
Het |
| Fgd2 |
A |
G |
17: 29,583,913 (GRCm39) |
E109G |
probably damaging |
Het |
| Gm19410 |
A |
T |
8: 36,240,766 (GRCm39) |
D214V |
probably damaging |
Het |
| Hivep2 |
T |
C |
10: 14,006,995 (GRCm39) |
Y1198H |
probably damaging |
Het |
| Itpr3 |
G |
A |
17: 27,337,651 (GRCm39) |
|
probably benign |
Het |
| Lrrc37 |
T |
C |
11: 103,511,762 (GRCm39) |
K69E |
unknown |
Het |
| Lrrc8e |
G |
A |
8: 4,284,410 (GRCm39) |
V212M |
probably damaging |
Het |
| Map2 |
A |
T |
1: 66,453,773 (GRCm39) |
S888C |
probably damaging |
Het |
| Met |
G |
T |
6: 17,548,715 (GRCm39) |
G920* |
probably null |
Het |
| Mlkl |
G |
T |
8: 112,049,365 (GRCm39) |
R253S |
|
Het |
| Mmachc |
T |
A |
4: 116,561,829 (GRCm39) |
I102F |
probably damaging |
Het |
| Mnt |
G |
T |
11: 74,733,880 (GRCm39) |
V504L |
unknown |
Het |
| Mup14 |
C |
T |
4: 61,258,496 (GRCm39) |
G96D |
probably damaging |
Het |
| Myh13 |
G |
A |
11: 67,242,885 (GRCm39) |
E933K |
probably damaging |
Het |
| Ncoa6 |
A |
G |
2: 155,249,726 (GRCm39) |
S1193P |
probably damaging |
Het |
| Nmur1 |
G |
T |
1: 86,315,252 (GRCm39) |
F204L |
probably benign |
Het |
| Or1ak2 |
A |
G |
2: 36,827,988 (GRCm39) |
N286D |
probably damaging |
Het |
| Or52e15 |
G |
T |
7: 104,645,301 (GRCm39) |
P270Q |
probably damaging |
Het |
| Or8a1 |
T |
A |
9: 37,641,806 (GRCm39) |
I158F |
probably damaging |
Het |
| Pappa2 |
T |
C |
1: 158,763,927 (GRCm39) |
Y528C |
probably damaging |
Het |
| Patl1 |
T |
C |
19: 11,920,289 (GRCm39) |
S748P |
possibly damaging |
Het |
| Peg10 |
C |
CTCA |
6: 4,756,453 (GRCm39) |
|
probably benign |
Het |
| Polr1a |
A |
G |
6: 71,908,767 (GRCm39) |
T531A |
probably benign |
Het |
| Slit3 |
C |
T |
11: 35,012,463 (GRCm39) |
S41F |
possibly damaging |
Het |
| Snap29 |
A |
G |
16: 17,246,058 (GRCm39) |
Q226R |
probably damaging |
Het |
| Spmip2 |
G |
A |
3: 79,337,429 (GRCm39) |
G185D |
probably damaging |
Het |
| Tmpo |
A |
G |
10: 90,989,138 (GRCm39) |
|
probably null |
Het |
| Tnfrsf21 |
G |
A |
17: 43,348,607 (GRCm39) |
G73E |
probably damaging |
Het |
| Tsc1 |
T |
A |
2: 28,552,617 (GRCm39) |
C119S |
possibly damaging |
Het |
| Uox |
A |
G |
3: 146,330,369 (GRCm39) |
Y199C |
probably damaging |
Het |
| Vav2 |
T |
C |
2: 27,187,708 (GRCm39) |
D231G |
possibly damaging |
Het |
| Vmn2r80 |
A |
T |
10: 79,005,378 (GRCm39) |
K338N |
probably benign |
Het |
| Xylt2 |
G |
A |
11: 94,561,229 (GRCm39) |
T178I |
probably benign |
Het |
| Zfp931 |
G |
T |
2: 177,709,594 (GRCm39) |
T264K |
probably damaging |
Het |
| Zgrf1 |
A |
G |
3: 127,377,326 (GRCm39) |
D857G |
probably benign |
Het |
|
| Other mutations in Nek10 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01361:Nek10
|
APN |
14 |
14,850,957 (GRCm38) |
missense |
probably damaging |
0.99 |
|
IGL02067:Nek10
|
APN |
14 |
14,861,639 (GRCm38) |
missense |
probably benign |
0.12 |
|
IGL02361:Nek10
|
APN |
14 |
14,843,856 (GRCm38) |
missense |
probably damaging |
1.00 |
|
IGL02687:Nek10
|
APN |
14 |
14,840,570 (GRCm38) |
missense |
probably damaging |
1.00 |
|
IGL02929:Nek10
|
APN |
14 |
14,821,119 (GRCm38) |
missense |
possibly damaging |
0.82 |
|
IGL03229:Nek10
|
APN |
14 |
14,986,686 (GRCm38) |
missense |
probably benign |
0.10 |
|
P0041:Nek10
|
UTSW |
14 |
14,861,603 (GRCm38) |
missense |
probably benign |
0.01 |
|
R0007:Nek10
|
UTSW |
14 |
14,840,574 (GRCm38) |
missense |
probably benign |
0.10 |
|
R0007:Nek10
|
UTSW |
14 |
14,840,574 (GRCm38) |
missense |
probably benign |
0.10 |
|
R0142:Nek10
|
UTSW |
14 |
14,861,560 (GRCm38) |
missense |
possibly damaging |
0.96 |
|
R0433:Nek10
|
UTSW |
14 |
14,860,927 (GRCm38) |
missense |
probably benign |
0.32 |
|
R0633:Nek10
|
UTSW |
14 |
14,857,782 (GRCm38) |
critical splice acceptor site |
probably null |
|
|
R1087:Nek10
|
UTSW |
14 |
14,827,059 (GRCm38) |
missense |
possibly damaging |
0.59 |
|
R1184:Nek10
|
UTSW |
14 |
14,931,325 (GRCm38) |
splice site |
probably benign |
|
|
R1250:Nek10
|
UTSW |
14 |
14,853,887 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R1371:Nek10
|
UTSW |
14 |
14,850,983 (GRCm38) |
missense |
probably damaging |
0.98 |
|
R1506:Nek10
|
UTSW |
14 |
14,999,078 (GRCm38) |
splice site |
probably benign |
|
|
R1829:Nek10
|
UTSW |
14 |
14,863,454 (GRCm38) |
critical splice acceptor site |
probably null |
|
|
R1831:Nek10
|
UTSW |
14 |
14,842,789 (GRCm38) |
missense |
probably benign |
|
|
R1833:Nek10
|
UTSW |
14 |
14,842,789 (GRCm38) |
missense |
probably benign |
|
|
R1990:Nek10
|
UTSW |
14 |
14,860,764 (GRCm38) |
missense |
probably benign |
|
|
R1997:Nek10
|
UTSW |
14 |
14,827,003 (GRCm38) |
missense |
probably benign |
0.09 |
|
R2011:Nek10
|
UTSW |
14 |
14,885,122 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R2158:Nek10
|
UTSW |
14 |
14,885,047 (GRCm38) |
splice site |
probably null |
|
|
R2288:Nek10
|
UTSW |
14 |
14,853,956 (GRCm38) |
nonsense |
probably null |
|
|
R2568:Nek10
|
UTSW |
14 |
14,999,112 (GRCm38) |
missense |
possibly damaging |
0.89 |
|
R2907:Nek10
|
UTSW |
14 |
14,980,613 (GRCm38) |
missense |
possibly damaging |
0.81 |
|
R2965:Nek10
|
UTSW |
14 |
14,836,202 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R3922:Nek10
|
UTSW |
14 |
14,861,585 (GRCm38) |
missense |
possibly damaging |
0.88 |
|
R4032:Nek10
|
UTSW |
14 |
14,853,877 (GRCm38) |
splice site |
probably null |
|
|
R4700:Nek10
|
UTSW |
14 |
14,842,841 (GRCm38) |
missense |
possibly damaging |
0.69 |
|
R4742:Nek10
|
UTSW |
14 |
14,861,624 (GRCm38) |
missense |
probably null |
0.03 |
|
R4785:Nek10
|
UTSW |
14 |
14,855,714 (GRCm38) |
missense |
probably benign |
|
|
R4890:Nek10
|
UTSW |
14 |
14,860,986 (GRCm38) |
missense |
possibly damaging |
0.47 |
|
R4891:Nek10
|
UTSW |
14 |
14,860,986 (GRCm38) |
missense |
possibly damaging |
0.47 |
|
R4920:Nek10
|
UTSW |
14 |
14,860,986 (GRCm38) |
missense |
possibly damaging |
0.47 |
|
R4924:Nek10
|
UTSW |
14 |
14,846,594 (GRCm38) |
splice site |
probably null |
|
|
R4928:Nek10
|
UTSW |
14 |
14,930,577 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R4948:Nek10
|
UTSW |
14 |
14,860,986 (GRCm38) |
missense |
possibly damaging |
0.47 |
|
R4952:Nek10
|
UTSW |
14 |
14,860,986 (GRCm38) |
missense |
possibly damaging |
0.47 |
|
R4953:Nek10
|
UTSW |
14 |
14,860,986 (GRCm38) |
missense |
possibly damaging |
0.47 |
|
R5092:Nek10
|
UTSW |
14 |
14,820,851 (GRCm38) |
missense |
possibly damaging |
0.81 |
|
R5097:Nek10
|
UTSW |
14 |
14,857,851 (GRCm38) |
missense |
probably benign |
0.00 |
|
R5593:Nek10
|
UTSW |
14 |
14,980,544 (GRCm38) |
nonsense |
probably null |
|
|
R5696:Nek10
|
UTSW |
14 |
14,860,736 (GRCm38) |
splice site |
probably null |
|
|
R5813:Nek10
|
UTSW |
14 |
14,986,704 (GRCm38) |
missense |
probably benign |
0.01 |
|
R5829:Nek10
|
UTSW |
14 |
14,865,404 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R5872:Nek10
|
UTSW |
14 |
14,850,896 (GRCm38) |
missense |
probably benign |
0.06 |
|
R5939:Nek10
|
UTSW |
14 |
14,931,290 (GRCm38) |
missense |
possibly damaging |
0.58 |
|
R6025:Nek10
|
UTSW |
14 |
14,865,633 (GRCm38) |
missense |
probably benign |
0.41 |
|
R6235:Nek10
|
UTSW |
14 |
14,821,113 (GRCm38) |
nonsense |
probably null |
|
|
R6539:Nek10
|
UTSW |
14 |
14,860,789 (GRCm38) |
missense |
possibly damaging |
0.94 |
|
R6542:Nek10
|
UTSW |
14 |
14,999,108 (GRCm38) |
missense |
probably benign |
0.44 |
|
R6561:Nek10
|
UTSW |
14 |
14,828,448 (GRCm38) |
missense |
possibly damaging |
0.48 |
|
R6659:Nek10
|
UTSW |
14 |
14,861,684 (GRCm38) |
missense |
probably benign |
0.29 |
|
R7039:Nek10
|
UTSW |
14 |
14,986,700 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R7039:Nek10
|
UTSW |
14 |
14,826,946 (GRCm38) |
missense |
possibly damaging |
0.63 |
|
R7102:Nek10
|
UTSW |
14 |
14,828,517 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R7185:Nek10
|
UTSW |
14 |
14,846,621 (GRCm38) |
missense |
probably benign |
0.03 |
|
R7198:Nek10
|
UTSW |
14 |
14,850,947 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R7202:Nek10
|
UTSW |
14 |
14,836,171 (GRCm38) |
missense |
probably benign |
0.01 |
|
R7251:Nek10
|
UTSW |
14 |
14,853,965 (GRCm38) |
missense |
probably benign |
|
|
R7345:Nek10
|
UTSW |
14 |
14,955,503 (GRCm38) |
missense |
probably benign |
|
|
R7590:Nek10
|
UTSW |
14 |
15,006,693 (GRCm38) |
makesense |
probably null |
|
|
R7593:Nek10
|
UTSW |
14 |
14,826,955 (GRCm38) |
missense |
probably benign |
0.04 |
|
R7616:Nek10
|
UTSW |
14 |
14,937,759 (GRCm38) |
missense |
probably benign |
0.27 |
|
R7635:Nek10
|
UTSW |
14 |
14,850,932 (GRCm38) |
missense |
probably benign |
0.01 |
|
R7817:Nek10
|
UTSW |
14 |
15,001,017 (GRCm38) |
missense |
probably benign |
0.00 |
|
R7826:Nek10
|
UTSW |
14 |
14,860,846 (GRCm38) |
splice site |
probably null |
|
|
R7986:Nek10
|
UTSW |
14 |
15,001,020 (GRCm38) |
missense |
probably benign |
0.17 |
|
R8765:Nek10
|
UTSW |
14 |
14,999,104 (GRCm38) |
missense |
probably damaging |
0.97 |
|
R8856:Nek10
|
UTSW |
14 |
14,937,610 (GRCm38) |
missense |
probably damaging |
0.96 |
|
R8973:Nek10
|
UTSW |
14 |
14,931,321 (GRCm38) |
critical splice donor site |
probably null |
|
|
R9002:Nek10
|
UTSW |
14 |
14,980,590 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R9195:Nek10
|
UTSW |
14 |
14,821,139 (GRCm38) |
missense |
probably benign |
0.03 |
|
R9464:Nek10
|
UTSW |
14 |
14,937,766 (GRCm38) |
missense |
probably benign |
|
|
R9511:Nek10
|
UTSW |
14 |
14,828,511 (GRCm38) |
missense |
probably benign |
0.05 |
|
R9529:Nek10
|
UTSW |
14 |
14,850,833 (GRCm38) |
missense |
probably benign |
|
|
R9590:Nek10
|
UTSW |
14 |
14,853,888 (GRCm38) |
missense |
probably damaging |
1.00 |
|
Z1177:Nek10
|
UTSW |
14 |
15,001,157 (GRCm38) |
nonsense |
probably null |
|
|
Z1177:Nek10
|
UTSW |
14 |
14,853,948 (GRCm38) |
missense |
probably benign |
0.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- AGAACTGGCTAACTTGCACTG -3'
(R):5'- CAGTGGTTTTCAAGGAGACAC -3'
Sequencing Primer
(F):5'- GAACTGGCTAACTTGCACTGATTTTC -3'
(R):5'- GTGGTTTTCAAGGAGACACTATTAC -3'
|
| Posted On |
2021-12-30 |
Incidental Mutation