Incidental Mutation 'R9124:Abca8b'
ID 693126
Institutional Source Beutler Lab
Gene Symbol Abca8b
Ensembl Gene ENSMUSG00000020620
Gene Name ATP-binding cassette, sub-family A member 8b
Synonyms Abca8
MMRRC Submission
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R9124 (G1)
Quality Score 225.009
Status Validated
Chromosome 11
Chromosomal Location 109823016-109886671 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to A at 109828593 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Serine to Phenylalanine at position 1435 (S1435F)
Ref Sequence ENSEMBL: ENSMUSP00000020948 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000020948] [ENSMUST00000106669]
AlphaFold Q8K440
Predicted Effect probably damaging
Transcript: ENSMUST00000020948
AA Change: S1435F

PolyPhen 2 Score 0.967 (Sensitivity: 0.77; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000020948
Gene: ENSMUSG00000020620
AA Change: S1435F

DomainStartEndE-ValueType
Pfam:ABC2_membrane_3 28 417 3.9e-28 PFAM
AAA 507 691 6.36e-10 SMART
Pfam:ABC2_membrane_3 859 1215 1e-10 PFAM
low complexity region 1246 1255 N/A INTRINSIC
AAA 1313 1492 6.17e-8 SMART
low complexity region 1597 1607 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000106669
AA Change: S1373F

PolyPhen 2 Score 0.827 (Sensitivity: 0.84; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000102280
Gene: ENSMUSG00000020620
AA Change: S1373F

DomainStartEndE-ValueType
Pfam:ABC2_membrane_3 28 344 2.6e-16 PFAM
AAA 445 629 6.36e-10 SMART
transmembrane domain 798 815 N/A INTRINSIC
transmembrane domain 1001 1023 N/A INTRINSIC
transmembrane domain 1038 1060 N/A INTRINSIC
transmembrane domain 1072 1091 N/A INTRINSIC
transmembrane domain 1101 1123 N/A INTRINSIC
transmembrane domain 1136 1158 N/A INTRINSIC
low complexity region 1184 1193 N/A INTRINSIC
AAA 1251 1430 6.17e-8 SMART
low complexity region 1535 1545 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 99.0%
Validation Efficiency 100% (91/91)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The membrane-associated protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intracellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the ABC1 subfamily. Members of the ABC1 subfamily comprise the only major ABC subfamily found exclusively in multicellular eukaryotes. The encoded protein may regulate lipid metabolism and be involved in the formation and maintenance of myelin. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2014]
Allele List at MGI
Other mutations in this stock
Total: 95 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A1bg G T 15: 60,792,679 (GRCm39) N89K possibly damaging Het
Abca5 A T 11: 110,189,005 (GRCm39) D817E possibly damaging Het
Akap9 T C 5: 4,111,284 (GRCm39) L3115P probably damaging Het
Arhgap39 G A 15: 76,619,467 (GRCm39) R706W probably damaging Het
Atp5mk T C 19: 47,074,578 (GRCm39) M28V probably benign Het
BC061237 A T 14: 44,740,851 (GRCm39) I84F possibly damaging Het
Bhlhe22 T C 3: 18,109,342 (GRCm39) S131P probably damaging Het
Brinp1 C A 4: 68,747,582 (GRCm39) D174Y probably damaging Het
Bsdc1 A G 4: 129,359,068 (GRCm39) T40A probably benign Het
Ccdc65 A T 15: 98,618,863 (GRCm39) K281* probably null Het
Cd22 T C 7: 30,572,662 (GRCm39) I316V probably benign Het
Cdhr18 A G 14: 13,864,354 (GRCm38) F324S Het
Cfap100 A C 6: 90,386,330 (GRCm39) I275S Het
Chd3 T G 11: 69,260,162 (GRCm39) E19A unknown Het
Chrnb1 T C 11: 69,685,057 (GRCm39) D91G probably benign Het
Cr1l A G 1: 194,799,925 (GRCm39) S250P possibly damaging Het
Csmd1 A G 8: 16,034,806 (GRCm39) V2455A probably damaging Het
Dbp C T 7: 45,357,818 (GRCm39) R229C probably damaging Het
Dmxl1 C G 18: 50,072,639 (GRCm39) N2744K probably damaging Het
Dnah6 C A 6: 73,098,882 (GRCm39) V2058F possibly damaging Het
Dsp T A 13: 38,377,276 (GRCm39) V1687D probably benign Het
Dtd1 T A 2: 144,445,798 (GRCm39) M45K possibly damaging Het
Fat1 T A 8: 45,478,064 (GRCm39) V2370E possibly damaging Het
Fat1 T A 8: 45,403,363 (GRCm39) F38Y probably benign Het
Fgfr1 T A 8: 26,060,185 (GRCm39) D438E probably damaging Het
Fsip2 A T 2: 82,816,103 (GRCm39) K3945N probably benign Het
Galc C A 12: 98,220,423 (GRCm39) probably null Het
Git1 C A 11: 77,395,498 (GRCm39) D398E possibly damaging Het
Gm4924 A G 10: 82,214,875 (GRCm39) Q891R unknown Het
Gpc2 T C 5: 138,274,784 (GRCm39) probably benign Het
Havcr2 C T 11: 46,360,388 (GRCm39) T205I probably benign Het
Herc2 A G 7: 55,834,056 (GRCm39) N3087S probably damaging Het
Ifi204 C T 1: 173,579,193 (GRCm39) probably null Het
Imp4 C T 1: 34,479,128 (GRCm39) R4W unknown Het
Itfg2 A G 6: 128,401,770 (GRCm39) S3P probably damaging Het
Kcnn3 C T 3: 89,428,536 (GRCm39) T254I possibly damaging Het
Kics2 C T 10: 121,586,416 (GRCm39) Q244* probably null Het
Kpna1 A G 16: 35,853,644 (GRCm39) I425V probably benign Het
Krt23 A T 11: 99,383,755 (GRCm39) S46T probably damaging Het
Loxl4 C A 19: 42,596,099 (GRCm39) W118L probably damaging Het
Lrrc37 T C 11: 103,509,721 (GRCm39) Y749C unknown Het
Lysmd2 T A 9: 75,533,075 (GRCm39) L10Q probably damaging Het
Mcm5 T A 8: 75,851,418 (GRCm39) probably benign Het
Mctp2 T A 7: 71,909,178 (GRCm39) D45V probably damaging Het
Mdfic2 T A 6: 98,318,899 (GRCm39) N22I possibly damaging Het
Mfsd10 T C 5: 34,791,940 (GRCm39) T341A probably benign Het
Micu1 T A 10: 59,586,335 (GRCm39) L170Q probably damaging Het
Msantd5 T C 11: 51,125,481 (GRCm39) S135P probably benign Het
Muc5ac T C 7: 141,363,529 (GRCm39) I2280T unknown Het
Myo15a A T 11: 60,369,952 (GRCm39) Q904L probably benign Het
Myo6 G A 9: 80,195,353 (GRCm39) D908N unknown Het
Nlrp4e A T 7: 23,020,403 (GRCm39) M297L probably benign Het
Nptn A G 9: 58,558,498 (GRCm39) probably benign Het
Oas3 A C 5: 120,912,170 (GRCm39) D73E probably damaging Het
Or12j5 T A 7: 140,084,222 (GRCm39) H50L probably benign Het
Or52z14 A T 7: 103,252,863 (GRCm39) M1L probably benign Het
Or6d13 A T 6: 116,517,416 (GRCm39) M1L probably null Het
Or6n1 T C 1: 173,917,341 (GRCm39) L245P probably damaging Het
Pck1 C G 2: 172,997,018 (GRCm39) A220G probably benign Het
Pigq G A 17: 26,156,233 (GRCm39) T65I probably damaging Het
Pld2 T C 11: 70,431,696 (GRCm39) F9L probably damaging Het
Plk3 ACACTCAC ACAC 4: 116,989,090 (GRCm39) probably benign Het
Pnkd A G 1: 74,386,602 (GRCm39) R138G possibly damaging Het
Ralgapa1 A T 12: 55,781,881 (GRCm39) I781N probably damaging Het
Ranbp2 A G 10: 58,328,719 (GRCm39) I2873V probably benign Het
Rpn2 C A 2: 157,139,458 (GRCm39) Q283K probably benign Het
Shmt2 A G 10: 127,355,561 (GRCm39) S178P possibly damaging Het
Shroom3 A G 5: 93,112,401 (GRCm39) K1921E probably benign Het
Slc20a1 A G 2: 129,051,142 (GRCm39) S600G probably damaging Het
Slco1a7 A G 6: 141,668,830 (GRCm39) V534A possibly damaging Het
Slit1 C T 19: 41,594,951 (GRCm39) V1140I probably benign Het
Sncg T C 14: 34,095,640 (GRCm39) S51G possibly damaging Het
Spon2 C A 5: 33,372,935 (GRCm39) D256Y possibly damaging Het
Srcap G T 7: 127,159,874 (GRCm39) R3250L unknown Het
Sun1 T G 5: 139,231,121 (GRCm39) Y763* probably null Het
Synj1 A T 16: 90,735,513 (GRCm39) F1480Y probably benign Het
Tbc1d30 T A 10: 121,132,716 (GRCm39) N216I probably damaging Het
Tent2 A T 13: 93,284,160 (GRCm39) L465* probably null Het
Tgfb1 A T 7: 25,388,580 (GRCm39) K39* probably null Het
Tmem87a A G 2: 120,224,841 (GRCm39) probably null Het
Tmem8b C A 4: 43,681,982 (GRCm39) R452S probably benign Het
Tnfsf13b A G 8: 10,056,966 (GRCm39) I42V probably benign Het
Trpc2 A G 7: 101,745,090 (GRCm39) T769A possibly damaging Het
Ttc3 A G 16: 94,236,389 (GRCm39) T1033A probably benign Het
Ttll13 C T 7: 79,906,751 (GRCm39) A473V probably damaging Het
U2surp G A 9: 95,346,468 (GRCm39) R908* probably null Het
Ube2s A G 7: 4,814,510 (GRCm39) Y17H probably damaging Het
Vmn1r94 A T 7: 19,901,509 (GRCm39) M265K probably benign Het
Vmn2r23 T C 6: 123,719,038 (GRCm39) I797T possibly damaging Het
Yipf3 A T 17: 46,559,895 (GRCm39) E70D probably benign Het
Zcchc14 G A 8: 122,331,969 (GRCm39) P465S unknown Het
Zfp169 T C 13: 48,644,557 (GRCm39) E190G unknown Het
Zfp707 T C 15: 75,845,468 (GRCm39) S111P Het
Zfp738 T C 13: 67,819,457 (GRCm39) E178G possibly damaging Het
Zfr A T 15: 12,136,757 (GRCm39) N138I unknown Het
Other mutations in Abca8b
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00862:Abca8b APN 11 109,844,374 (GRCm39) missense possibly damaging 0.66
IGL00952:Abca8b APN 11 109,859,886 (GRCm39) critical splice donor site probably null
IGL01141:Abca8b APN 11 109,828,556 (GRCm39) missense probably damaging 1.00
IGL01523:Abca8b APN 11 109,867,320 (GRCm39) missense probably damaging 1.00
IGL01633:Abca8b APN 11 109,827,580 (GRCm39) missense probably damaging 0.99
IGL01862:Abca8b APN 11 109,837,997 (GRCm39) nonsense probably null
IGL01963:Abca8b APN 11 109,862,589 (GRCm39) missense probably damaging 0.99
IGL02169:Abca8b APN 11 109,843,408 (GRCm39) missense probably damaging 0.98
IGL02536:Abca8b APN 11 109,872,574 (GRCm39) missense probably benign 0.02
IGL02658:Abca8b APN 11 109,843,386 (GRCm39) missense probably benign
IGL02828:Abca8b APN 11 109,871,720 (GRCm39) missense probably damaging 0.99
IGL03118:Abca8b APN 11 109,838,007 (GRCm39) missense possibly damaging 0.66
IGL03302:Abca8b APN 11 109,858,576 (GRCm39) missense possibly damaging 0.80
IGL03325:Abca8b APN 11 109,844,422 (GRCm39) missense possibly damaging 0.94
R0057:Abca8b UTSW 11 109,832,385 (GRCm39) missense possibly damaging 0.91
R0131:Abca8b UTSW 11 109,833,115 (GRCm39) missense possibly damaging 0.46
R0226:Abca8b UTSW 11 109,847,844 (GRCm39) splice site probably null
R0426:Abca8b UTSW 11 109,845,853 (GRCm39) splice site probably benign
R0432:Abca8b UTSW 11 109,870,841 (GRCm39) missense possibly damaging 0.94
R0512:Abca8b UTSW 11 109,841,476 (GRCm39) missense probably benign 0.32
R0589:Abca8b UTSW 11 109,833,094 (GRCm39) missense probably damaging 0.96
R0690:Abca8b UTSW 11 109,860,634 (GRCm39) splice site probably benign
R1263:Abca8b UTSW 11 109,832,433 (GRCm39) missense possibly damaging 0.66
R1371:Abca8b UTSW 11 109,844,379 (GRCm39) missense probably damaging 0.99
R1497:Abca8b UTSW 11 109,864,647 (GRCm39) splice site probably benign
R1502:Abca8b UTSW 11 109,865,471 (GRCm39) missense probably damaging 1.00
R1517:Abca8b UTSW 11 109,862,640 (GRCm39) missense possibly damaging 0.66
R1543:Abca8b UTSW 11 109,865,500 (GRCm39) missense probably damaging 0.98
R1618:Abca8b UTSW 11 109,840,714 (GRCm39) splice site probably benign
R1625:Abca8b UTSW 11 109,857,947 (GRCm39) missense probably benign 0.11
R1753:Abca8b UTSW 11 109,864,542 (GRCm39) missense probably benign 0.00
R1819:Abca8b UTSW 11 109,871,882 (GRCm39) critical splice acceptor site probably null
R1822:Abca8b UTSW 11 109,847,901 (GRCm39) missense possibly damaging 0.92
R1829:Abca8b UTSW 11 109,833,167 (GRCm39) missense probably damaging 0.97
R1873:Abca8b UTSW 11 109,870,781 (GRCm39) missense probably benign 0.01
R1899:Abca8b UTSW 11 109,828,744 (GRCm39) missense possibly damaging 0.92
R1908:Abca8b UTSW 11 109,847,924 (GRCm39) missense possibly damaging 0.92
R1962:Abca8b UTSW 11 109,870,724 (GRCm39) missense probably benign 0.00
R1984:Abca8b UTSW 11 109,868,667 (GRCm39) missense probably damaging 1.00
R2035:Abca8b UTSW 11 109,847,932 (GRCm39) missense possibly damaging 0.94
R2092:Abca8b UTSW 11 109,857,534 (GRCm39) missense possibly damaging 0.63
R2100:Abca8b UTSW 11 109,828,608 (GRCm39) missense probably damaging 1.00
R2267:Abca8b UTSW 11 109,845,974 (GRCm39) missense probably benign 0.03
R2871:Abca8b UTSW 11 109,846,002 (GRCm39) missense possibly damaging 0.83
R2871:Abca8b UTSW 11 109,846,002 (GRCm39) missense possibly damaging 0.83
R2872:Abca8b UTSW 11 109,846,002 (GRCm39) missense possibly damaging 0.83
R2872:Abca8b UTSW 11 109,846,002 (GRCm39) missense possibly damaging 0.83
R2873:Abca8b UTSW 11 109,846,002 (GRCm39) missense possibly damaging 0.83
R3711:Abca8b UTSW 11 109,837,081 (GRCm39) missense possibly damaging 0.46
R3937:Abca8b UTSW 11 109,865,393 (GRCm39) missense probably benign 0.01
R4052:Abca8b UTSW 11 109,872,551 (GRCm39) nonsense probably null
R4060:Abca8b UTSW 11 109,848,027 (GRCm39) missense probably benign 0.04
R4207:Abca8b UTSW 11 109,872,551 (GRCm39) nonsense probably null
R4208:Abca8b UTSW 11 109,872,551 (GRCm39) nonsense probably null
R4354:Abca8b UTSW 11 109,862,518 (GRCm39) missense probably benign 0.27
R4399:Abca8b UTSW 11 109,827,211 (GRCm39) missense possibly damaging 0.66
R4456:Abca8b UTSW 11 109,833,071 (GRCm39) missense probably benign 0.27
R4509:Abca8b UTSW 11 109,857,581 (GRCm39) missense probably damaging 1.00
R4672:Abca8b UTSW 11 109,827,274 (GRCm39) missense possibly damaging 0.81
R4868:Abca8b UTSW 11 109,865,338 (GRCm39) missense probably benign 0.05
R5002:Abca8b UTSW 11 109,852,623 (GRCm39) missense probably damaging 0.96
R5007:Abca8b UTSW 11 109,827,590 (GRCm39) missense probably damaging 1.00
R5014:Abca8b UTSW 11 109,840,957 (GRCm39) missense probably damaging 0.98
R5023:Abca8b UTSW 11 109,865,814 (GRCm39) critical splice donor site probably null
R5091:Abca8b UTSW 11 109,827,210 (GRCm39) missense possibly damaging 0.92
R5098:Abca8b UTSW 11 109,847,944 (GRCm39) missense probably benign 0.05
R5117:Abca8b UTSW 11 109,857,629 (GRCm39) missense probably damaging 1.00
R5234:Abca8b UTSW 11 109,867,420 (GRCm39) missense possibly damaging 0.90
R5302:Abca8b UTSW 11 109,868,639 (GRCm39) missense probably damaging 1.00
R5307:Abca8b UTSW 11 109,868,639 (GRCm39) missense probably damaging 1.00
R5487:Abca8b UTSW 11 109,844,340 (GRCm39) missense probably damaging 0.99
R5512:Abca8b UTSW 11 109,868,639 (GRCm39) missense probably damaging 1.00
R5564:Abca8b UTSW 11 109,825,407 (GRCm39) missense probably benign 0.08
R5610:Abca8b UTSW 11 109,868,639 (GRCm39) missense probably damaging 1.00
R5677:Abca8b UTSW 11 109,831,687 (GRCm39) missense probably damaging 1.00
R5723:Abca8b UTSW 11 109,844,445 (GRCm39) missense possibly damaging 0.90
R5827:Abca8b UTSW 11 109,868,639 (GRCm39) missense probably damaging 1.00
R5829:Abca8b UTSW 11 109,868,639 (GRCm39) missense probably damaging 1.00
R5848:Abca8b UTSW 11 109,868,639 (GRCm39) missense probably damaging 1.00
R5849:Abca8b UTSW 11 109,868,639 (GRCm39) missense probably damaging 1.00
R5850:Abca8b UTSW 11 109,868,639 (GRCm39) missense probably damaging 1.00
R5854:Abca8b UTSW 11 109,868,639 (GRCm39) missense probably damaging 1.00
R5982:Abca8b UTSW 11 109,844,423 (GRCm39) missense possibly damaging 0.80
R5994:Abca8b UTSW 11 109,840,592 (GRCm39) splice site probably null
R6035:Abca8b UTSW 11 109,862,686 (GRCm39) splice site probably null
R6035:Abca8b UTSW 11 109,862,686 (GRCm39) splice site probably null
R6050:Abca8b UTSW 11 109,868,639 (GRCm39) missense probably damaging 1.00
R6145:Abca8b UTSW 11 109,864,634 (GRCm39) missense probably benign 0.03
R6223:Abca8b UTSW 11 109,868,672 (GRCm39) missense probably benign 0.00
R6349:Abca8b UTSW 11 109,825,544 (GRCm39) splice site probably null
R7002:Abca8b UTSW 11 109,832,390 (GRCm39) missense probably damaging 1.00
R7050:Abca8b UTSW 11 109,864,544 (GRCm39) missense possibly damaging 0.90
R7107:Abca8b UTSW 11 109,867,299 (GRCm39) missense probably damaging 0.98
R7158:Abca8b UTSW 11 109,825,415 (GRCm39) missense probably damaging 1.00
R7170:Abca8b UTSW 11 109,836,654 (GRCm39) missense probably benign 0.09
R7197:Abca8b UTSW 11 109,836,648 (GRCm39) nonsense probably null
R7220:Abca8b UTSW 11 109,872,543 (GRCm39) missense probably damaging 1.00
R7512:Abca8b UTSW 11 109,829,275 (GRCm39) missense probably benign 0.01
R7590:Abca8b UTSW 11 109,829,341 (GRCm39) missense probably damaging 0.97
R7658:Abca8b UTSW 11 109,826,543 (GRCm39) missense probably benign 0.00
R7739:Abca8b UTSW 11 109,865,417 (GRCm39) missense probably benign 0.05
R7797:Abca8b UTSW 11 109,862,509 (GRCm39) critical splice donor site probably null
R7934:Abca8b UTSW 11 109,865,865 (GRCm39) missense possibly damaging 0.75
R8074:Abca8b UTSW 11 109,829,320 (GRCm39) missense probably benign
R8302:Abca8b UTSW 11 109,853,406 (GRCm39) critical splice donor site probably null
R8341:Abca8b UTSW 11 109,845,876 (GRCm39) missense probably damaging 1.00
R8486:Abca8b UTSW 11 109,857,937 (GRCm39) missense possibly damaging 0.83
R8748:Abca8b UTSW 11 109,836,597 (GRCm39) missense probably damaging 1.00
R8924:Abca8b UTSW 11 109,838,003 (GRCm39) missense probably benign 0.00
R9002:Abca8b UTSW 11 109,843,456 (GRCm39) missense probably benign 0.02
R9032:Abca8b UTSW 11 109,848,073 (GRCm39) missense probably benign 0.04
R9099:Abca8b UTSW 11 109,871,708 (GRCm39) missense probably damaging 1.00
R9178:Abca8b UTSW 11 109,840,937 (GRCm39) missense probably benign 0.00
R9188:Abca8b UTSW 11 109,872,561 (GRCm39) nonsense probably null
R9277:Abca8b UTSW 11 109,867,347 (GRCm39) missense probably damaging 0.99
R9340:Abca8b UTSW 11 109,840,939 (GRCm39) missense probably benign 0.43
R9371:Abca8b UTSW 11 109,858,498 (GRCm39) missense probably damaging 1.00
R9382:Abca8b UTSW 11 109,870,711 (GRCm39) missense probably benign
R9450:Abca8b UTSW 11 109,859,930 (GRCm39) missense probably damaging 0.98
R9462:Abca8b UTSW 11 109,844,433 (GRCm39) missense
R9712:Abca8b UTSW 11 109,833,163 (GRCm39) missense probably benign 0.30
Z1088:Abca8b UTSW 11 109,867,308 (GRCm39) missense probably benign 0.09
Z1176:Abca8b UTSW 11 109,865,470 (GRCm39) missense possibly damaging 0.87
Z1176:Abca8b UTSW 11 109,852,734 (GRCm39) missense possibly damaging 0.52
Predicted Primers PCR Primer
(F):5'- CTTTATGTGCCTGTGTGCAC -3'
(R):5'- AAGTCTCCTGTGAAGACGCTG -3'

Sequencing Primer
(F):5'- GCCAAGACTTGTTATTCAGTGAGCTC -3'
(R):5'- TCCTGTGAAGACGCTGTCAGAG -3'
Posted On 2022-01-20