Mutagenetix > Incidental Mutation

Incidental Mutation 'R9137:Msln'

694112

Institutional Source

Beutler Lab

Gene Symbol

Msln

Ensembl Gene

ENSMUSG00000063011

Gene Name

mesothelin

Synonyms

megakaryocyte potentiating factor, MPF

MMRRC Submission

068932-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.071) question?

Stock #

R9137 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

25967587-25973352 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to T at 25969084 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Alanine to Threonine at position 434 (A434T)

Ref Sequence

ENSEMBL: ENSMUSP00000075279 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000047098] [ENSMUST00000075884]

AlphaFold

Q61468

Predicted Effect

probably benign
Transcript: ENSMUST00000047098

SMART Domains

Protein: ENSMUSP00000049020
Gene: ENSMUSG00000041062

Domain	Start	End	E-Value	Type
signal peptide	1	23	N/A	INTRINSIC
Pfam:Mesothelin	29	589	2.8e-70	PFAM
low complexity region	633	653	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000075884
AA Change: A434T

PolyPhen 2 Score 0.243 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000075279
Gene: ENSMUSG00000063011
AA Change: A434T

Domain	Start	End	E-Value	Type
Pfam:Mesothelin	1	624	N/A	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.0%

Validation Efficiency

100% (55/55)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a preproprotein that is proteolytically processed to generate two protein products, megakaryocyte potentiating factor and mesothelin. Megakaryocyte potentiating factor functions as a cytokine that can stimulate colony formation of bone marrow megakaryocytes. Mesothelin is a glycosylphosphatidylinositol-anchored cell-surface protein that may function as a cell adhesion protein. This protein is overexpressed in epithelial mesotheliomas, ovarian cancers and in specific squamous cell carcinomas. Alternative splicing results in multiple transcript variants, at least one of which encodes an isoform that is proteolytically processed. [provided by RefSeq, Feb 2016]
PHENOTYPE: Mice homozygous for disruptions in this allele display a normal phenotype. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 54 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930562C15Rik	A	G	16: 4,685,312 (GRCm39)	K299R	probably benign	Het
Abca12	T	G	1: 71,298,525 (GRCm39)	I2366L	possibly damaging	Het
Adgrv1	A	G	13: 81,688,133 (GRCm39)	V1749A	probably damaging	Het
Ano9	C	T	7: 140,684,028 (GRCm39)	V546M	probably damaging	Het
Atad5	A	T	11: 79,986,481 (GRCm39)	S523C	probably damaging	Het
Cacna1s	A	T	1: 135,996,744 (GRCm39)	D115V	possibly damaging	Het
Ccdc18	T	G	5: 108,296,856 (GRCm39)	C220G	probably damaging	Het
Cfap61	A	C	2: 146,042,685 (GRCm39)	K1153Q	probably benign	Het
Cmklr1	G	C	5: 113,752,043 (GRCm39)	H319Q	probably benign	Het
Cntnap5c	T	A	17: 58,601,203 (GRCm39)		probably benign	Het
Col11a1	A	G	3: 113,855,172 (GRCm39)	K144R	unknown	Het
Cr2	A	G	1: 194,850,640 (GRCm39)		probably null	Het
Cyp3a16	A	C	5: 145,406,413 (GRCm39)	V13G	unknown	Het
E330034G19Rik	A	G	14: 24,346,109 (GRCm39)	N72D	unknown	Het
Enah	A	G	1: 181,739,160 (GRCm39)		probably null	Het
Fezf1	T	A	6: 23,246,511 (GRCm39)		probably benign	Het
Gabrr2	T	A	4: 33,095,571 (GRCm39)	S487T	probably benign	Het
Gas2l2	G	A	11: 83,315,894 (GRCm39)	T275M	probably damaging	Het
Hectd4	A	G	5: 121,496,238 (GRCm39)	K3877E	possibly damaging	Het
Hhla1	G	T	15: 65,795,761 (GRCm39)	Q482K	probably damaging	Het
Hivep2	A	G	10: 14,004,712 (GRCm39)	T437A	probably benign	Het
Iars1	C	T	13: 49,855,350 (GRCm39)	T259M	probably benign	Het
Il18rap	C	T	1: 40,582,177 (GRCm39)	T366M	probably benign	Het
Itpk1	T	C	12: 102,540,291 (GRCm39)	E264G	probably benign	Het
Katnb1	G	A	8: 95,824,320 (GRCm39)	M501I	possibly damaging	Het
Kcna10	G	A	3: 107,102,497 (GRCm39)	G376E	probably damaging	Het
Kif23	A	T	9: 61,834,713 (GRCm39)	F397I	probably damaging	Het
Klf14	A	T	6: 30,934,855 (GRCm39)	C260S	probably damaging	Het
Lgi2	T	A	5: 52,695,361 (GRCm39)	S533C	probably damaging	Het
Marveld1	A	G	19: 42,136,440 (GRCm39)	D118G	probably benign	Het
Neb	T	C	2: 52,150,502 (GRCm39)		probably benign	Het
Nes	G	T	3: 87,878,651 (GRCm39)	G48W	probably damaging	Het
Or5k3	T	A	16: 58,969,635 (GRCm39)	C141S	probably benign	Het
Osmr	T	A	15: 6,856,709 (GRCm39)	E479D	probably benign	Het
Otop3	A	G	11: 115,235,868 (GRCm39)	H500R	possibly damaging	Het
Peg10	CCACATCAGGATCCACATCAGGATGCACATCAGCATCAGGATCCCCATCAGGATGCACATCAGGATCCACATCAGGATGCACATCAG	CCACATCAGGATCCACATCAGGATGCACATCAG	6: 4,756,398 (GRCm39)		probably benign	Het
Phldb3	C	T	7: 24,310,723 (GRCm39)		probably benign	Het
Ppp4r3a	T	A	12: 101,021,794 (GRCm39)	I369F	possibly damaging	Het
Rarres1	T	A	3: 67,422,801 (GRCm39)		probably benign	Het
Scn4a	A	G	11: 106,214,736 (GRCm39)	V1287A	probably damaging	Het
Sertad2	A	T	11: 20,598,425 (GRCm39)	E207V	probably benign	Het
Sh3bp4	T	A	1: 89,072,647 (GRCm39)	C498*	probably null	Het
Smtn	T	G	11: 3,472,838 (GRCm39)	K278T	possibly damaging	Het
Sp140	T	C	1: 85,570,297 (GRCm39)	S405P	probably damaging	Het
Spata31e2	A	T	1: 26,724,715 (GRCm39)	I155N	probably benign	Het
Spem1	A	G	11: 69,712,433 (GRCm39)	V77A	probably benign	Het
St8sia2	T	G	7: 73,610,654 (GRCm39)	I210L	probably benign	Het
Stkld1	T	C	2: 26,840,572 (GRCm39)	I418T	probably benign	Het
Tpcn1	A	G	5: 120,695,990 (GRCm39)	F88L	probably damaging	Het
Trim66	C	T	7: 109,074,330 (GRCm39)	V644M	probably damaging	Het
Ttc41	T	C	10: 86,612,486 (GRCm39)	I1253T	probably benign	Het
Vmn2r86	T	C	10: 130,282,409 (GRCm39)	N736D	probably damaging	Het
Zfat	T	A	15: 68,051,794 (GRCm39)	T667S	probably benign	Het
Zfp874a	T	C	13: 67,590,841 (GRCm39)	E281G	probably damaging	Het

Other mutations in Msln

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01739:Msln	APN	17	25,969,004 (GRCm39)	critical splice donor site	probably null
IGL02986:Msln	APN	17	25,971,907 (GRCm39)	splice site	probably benign
R0349:Msln	UTSW	17	25,969,250 (GRCm39)	missense	possibly damaging	0.69
R0562:Msln	UTSW	17	25,971,980 (GRCm39)	missense	probably benign	0.16
R0845:Msln	UTSW	17	25,969,770 (GRCm39)	missense	probably damaging	1.00
R1256:Msln	UTSW	17	25,973,157 (GRCm39)	missense	probably damaging	1.00
R1305:Msln	UTSW	17	25,972,001 (GRCm39)	missense	probably benign	0.00
R1651:Msln	UTSW	17	25,972,382 (GRCm39)	missense	probably benign	0.00
R1930:Msln	UTSW	17	25,970,896 (GRCm39)	missense	probably damaging	0.99
R1996:Msln	UTSW	17	25,973,193 (GRCm39)	start codon destroyed	possibly damaging	0.94
R4532:Msln	UTSW	17	25,969,698 (GRCm39)	missense	probably damaging	0.98
R5004:Msln	UTSW	17	25,973,193 (GRCm39)	start codon destroyed	possibly damaging	0.94
R5157:Msln	UTSW	17	25,971,957 (GRCm39)	missense	probably benign	0.01
R5159:Msln	UTSW	17	25,970,563 (GRCm39)	missense	probably benign	0.01
R5510:Msln	UTSW	17	25,968,847 (GRCm39)	missense	probably benign	0.15
R6385:Msln	UTSW	17	25,970,115 (GRCm39)	missense	probably benign	0.19
R6650:Msln	UTSW	17	25,969,144 (GRCm39)	missense	probably benign	0.00
R6682:Msln	UTSW	17	25,971,993 (GRCm39)	missense	probably damaging	0.99
R7091:Msln	UTSW	17	25,969,054 (GRCm39)	missense	probably damaging	1.00
R7472:Msln	UTSW	17	25,969,708 (GRCm39)	missense	possibly damaging	0.95
R8085:Msln	UTSW	17	25,971,942 (GRCm39)	nonsense	probably null
R8289:Msln	UTSW	17	25,967,880 (GRCm39)	missense	possibly damaging	0.50
R9217:Msln	UTSW	17	25,970,125 (GRCm39)	missense	probably benign	0.02
R9309:Msln	UTSW	17	25,970,148 (GRCm39)	missense	possibly damaging	0.68
R9311:Msln	UTSW	17	25,971,990 (GRCm39)	missense	probably benign	0.09
R9441:Msln	UTSW	17	25,969,731 (GRCm39)	missense	probably benign	0.02
R9652:Msln	UTSW	17	25,968,042 (GRCm39)	missense	probably damaging	1.00
R9723:Msln	UTSW	17	25,969,008 (GRCm39)	missense	possibly damaging	0.55
R9798:Msln	UTSW	17	25,972,771 (GRCm39)	missense	probably benign	0.01
X0002:Msln	UTSW	17	25,971,284 (GRCm39)	splice site	probably null
Z1176:Msln	UTSW	17	25,972,768 (GRCm39)	missense	possibly damaging	0.74

Predicted Primers

PCR Primer
(F):5'- TTCTGGTAGAGGAGACCCAG -3'
(R):5'- CTGCTCAAAGTCAGCAAAGGAC -3'

Sequencing Primer
(F):5'- TAGAGGAGACCCAGATGCCTC -3'
(R):5'- CAAAAGATGAATGCTCAGGTAACATC -3'

Posted On

2022-01-20