Mutagenetix > Incidental Mutation

Incidental Mutation 'R9139:Trim31'

694243

Institutional Source

Beutler Lab

Gene Symbol

Trim31

Ensembl Gene

ENSMUSG00000058063

Gene Name

tripartite motif-containing 31

Synonyms

HCG1

MMRRC Submission

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R9139 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

37209022-37221109 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to T at 37209382 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Methionine at position 46 (T46M)

Ref Sequence

ENSEMBL: ENSMUSP00000077535 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000078438]

AlphaFold

Q8R0K2

Predicted Effect

possibly damaging
Transcript: ENSMUST00000078438
AA Change: T46M

PolyPhen 2 Score 0.726 (Sensitivity: 0.86; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000077535
Gene: ENSMUSG00000058063
AA Change: T46M

Domain	Start	End	E-Value	Type
RING	16	55	6.63e-10	SMART
BBOX	89	130	1.29e-12	SMART
low complexity region	149	164	N/A	INTRINSIC
coiled coil region	269	299	N/A	INTRINSIC
PRY	332	387	4.4e-2	SMART
Pfam:SPRY	390	506	1.6e-9	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.3%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein that functions as an E3 ubiquitin-protein ligase. This gene shows altered expression in certain tumors and may be a negative regulator of cell growth. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2016]

Allele List at MGI

Other mutations in this stock

Total: 64 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aamp	A	G	1: 74,320,705 (GRCm39)	V288A	possibly damaging	Het
Ankhd1	T	A	18: 36,711,810 (GRCm39)	S135R		Het
Axl	G	A	7: 25,460,846 (GRCm39)	T721I	probably damaging	Het
Blnk	G	A	19: 40,922,962 (GRCm39)	A388V	probably benign	Het
C8b	T	C	4: 104,641,631 (GRCm39)	V189A	probably damaging	Het
Ccdc33	G	C	9: 57,983,842 (GRCm39)	I452M	probably benign	Het
Cfap57	T	C	4: 118,412,048 (GRCm39)	T1199A	probably benign	Het
Chga	G	A	12: 102,528,144 (GRCm39)	V212M	probably benign	Het
Cspp1	T	A	1: 10,186,875 (GRCm39)	M887K	probably damaging	Het
Cyp3a16	G	C	5: 145,406,434 (GRCm39)	A6G	unknown	Het
Cyp4f17	G	T	17: 32,743,868 (GRCm39)	E349*	probably null	Het
Dnajc13	A	T	9: 104,085,039 (GRCm39)	D791E	probably benign	Het
Dpysl5	T	C	5: 30,935,397 (GRCm39)	Y167H	probably benign	Het
Dqx1	G	T	6: 83,036,759 (GRCm39)	Q254H	possibly damaging	Het
Eef1g	A	G	19: 8,955,383 (GRCm39)	T411A	probably benign	Het
Fancl	C	A	11: 26,337,231 (GRCm39)	A6E	probably benign	Het
Gabrr3	A	G	16: 59,227,830 (GRCm39)	Q29R	probably benign	Het
Gtf2h2	A	C	13: 100,617,778 (GRCm39)	L168R	probably damaging	Het
Hacl1	T	A	14: 31,338,338 (GRCm39)	Q413L	probably benign	Het
Hdc	A	T	2: 126,439,837 (GRCm39)	V372E	probably damaging	Het
Hr	A	T	14: 70,795,079 (GRCm39)	H208L	possibly damaging	Het
Htr6	T	C	4: 138,789,501 (GRCm39)	R255G	possibly damaging	Het
Jup	C	T	11: 100,270,391 (GRCm39)	C372Y	probably damaging	Het
Kank2	A	G	9: 21,681,370 (GRCm39)	V747A	probably damaging	Het
Kif5c	A	G	2: 49,620,291 (GRCm39)	T508A	probably benign	Het
Klhdc8b	A	G	9: 108,326,927 (GRCm39)	V145A	probably damaging	Het
Klk1b21	T	A	7: 43,754,924 (GRCm39)	V73D	probably damaging	Het
Ksr1	T	A	11: 78,911,572 (GRCm39)	M737L	probably benign	Het
Macf1	T	C	4: 123,328,564 (GRCm39)	Y4723C	probably damaging	Het
Mcm7	T	C	5: 138,167,397 (GRCm39)	Y182C	probably damaging	Het
Mtf2	T	C	5: 108,252,398 (GRCm39)		probably null	Het
Nrxn2	A	T	19: 6,498,299 (GRCm39)	T255S	probably benign	Het
Or10v9	A	G	19: 11,832,666 (GRCm39)	L217P	probably damaging	Het
Or10x4	A	T	1: 174,218,649 (GRCm39)	T5S	probably damaging	Het
Or11g25	T	C	14: 50,723,707 (GRCm39)	L264P	probably damaging	Het
Or2z2	T	A	11: 58,345,999 (GRCm39)	T259S	possibly damaging	Het
Or52k2	T	A	7: 102,254,185 (GRCm39)	I208N	probably damaging	Het
Or9m1	A	T	2: 87,733,108 (GRCm39)	M304K	probably benign	Het
Pamr1	T	A	2: 102,464,766 (GRCm39)	V305E	probably benign	Het
Peg10	GAT	GATCAT	6: 4,756,449 (GRCm39)		probably benign	Het
Peg10	C	T	6: 4,757,128 (GRCm39)	T568M	unknown	Het
Polr3a	A	G	14: 24,519,416 (GRCm39)	F664S	probably damaging	Het
Prb1a	T	A	6: 132,185,306 (GRCm39)	N109I	unknown	Het
Prdm2	T	C	4: 142,858,752 (GRCm39)	I1513V	probably benign	Het
Prkd3	A	C	17: 79,269,969 (GRCm39)	V564G	possibly damaging	Het
Prss16	A	G	13: 22,192,513 (GRCm39)	S151P	probably damaging	Het
Rnf150	C	T	8: 83,590,588 (GRCm39)		probably benign	Het
Rttn	A	G	18: 89,038,261 (GRCm39)	T786A	probably benign	Het
Scin	A	G	12: 40,113,236 (GRCm39)	V645A	possibly damaging	Het
Slc25a20	T	A	9: 108,557,398 (GRCm39)	M177K	probably benign	Het
Slc2a6	G	A	2: 26,914,334 (GRCm39)	S261L	possibly damaging	Het
Slc4a7	A	T	14: 14,796,115 (GRCm38)	D1118V	probably damaging	Het
Slc7a2	T	C	8: 41,358,709 (GRCm39)	W351R	probably damaging	Het
Sp8	G	A	12: 118,812,174 (GRCm39)	G10S	probably damaging	Het
St8sia2	A	G	7: 73,616,513 (GRCm39)	I175T	probably damaging	Het
Tas2r122	T	A	6: 132,688,779 (GRCm39)	N38I	probably benign	Het
Trio	G	A	15: 27,749,922 (GRCm39)	Q2260*	probably null	Het
Trpm1	T	C	7: 63,848,943 (GRCm39)	I63T	probably benign	Het
Ugt2b37	T	C	5: 87,399,636 (GRCm39)	K291E	probably benign	Het
Usp54	T	C	14: 20,627,162 (GRCm39)	T499A	probably benign	Het
Vmn1r35	T	C	6: 66,655,933 (GRCm39)	I246V	probably benign	Het
Vmn2r6	A	G	3: 64,464,277 (GRCm39)	S186P	probably benign	Het
Vmn2r76	T	A	7: 85,879,170 (GRCm39)	M377L	probably benign	Het
Zeb2	A	C	2: 44,878,637 (GRCm39)	M1243R	possibly damaging	Het

Other mutations in Trim31

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00486:Trim31	APN	17	37,220,133 (GRCm39)	missense	probably benign	0.02
IGL01336:Trim31	APN	17	37,220,269 (GRCm39)	missense	probably damaging	0.97
IGL01420:Trim31	APN	17	37,209,303 (GRCm39)	missense	probably benign	0.01
R1485:Trim31	UTSW	17	37,209,568 (GRCm39)	missense	probably damaging	1.00
R1901:Trim31	UTSW	17	37,212,692 (GRCm39)	missense	probably benign	0.06
R2962:Trim31	UTSW	17	37,210,796 (GRCm39)	missense	probably damaging	1.00
R4569:Trim31	UTSW	17	37,209,633 (GRCm39)	missense	probably benign	0.37
R5352:Trim31	UTSW	17	37,210,810 (GRCm39)	missense	possibly damaging	0.83
R5439:Trim31	UTSW	17	37,216,797 (GRCm39)	critical splice acceptor site	probably null
R6128:Trim31	UTSW	17	37,220,491 (GRCm39)	missense	probably benign	0.00
R6179:Trim31	UTSW	17	37,220,501 (GRCm39)	missense	probably damaging	1.00
R6441:Trim31	UTSW	17	37,218,683 (GRCm39)	missense	possibly damaging	0.57
R7068:Trim31	UTSW	17	37,209,408 (GRCm39)	missense	probably damaging	1.00
R7310:Trim31	UTSW	17	37,218,194 (GRCm39)	missense	probably benign	0.00
R7459:Trim31	UTSW	17	37,220,554 (GRCm39)	missense	probably damaging	0.98
R8506:Trim31	UTSW	17	37,218,150 (GRCm39)	critical splice acceptor site	probably null
R8811:Trim31	UTSW	17	37,210,875 (GRCm39)	missense	probably benign	0.28
R9139:Trim31	UTSW	17	37,220,145 (GRCm39)	missense	probably benign	0.36
R9612:Trim31	UTSW	17	37,212,551 (GRCm39)	missense	probably benign	0.05

Predicted Primers

PCR Primer
(F):5'- TTACAAGCACCAGGCCTTG -3'
(R):5'- TCCTTGGAGTCACGACACAC -3'

Sequencing Primer
(F):5'- AGGCCTTGGATTTCTGTACTTTCAC -3'
(R):5'- TCCTGCTCGCAGAAGTAATG -3'

Posted On

2022-01-20