Mutagenetix > Incidental Mutation

Incidental Mutation 'R9183:Vmn2r89'

697203

Institutional Source

Beutler Lab

Gene Symbol

Vmn2r89

Ensembl Gene

ENSMUSG00000070448

Gene Name

vomeronasal 2, receptor 89

Synonyms

V2r10, V2r11

MMRRC Submission

068950-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.160) question?

Stock #

R9183 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

51689419-51698750 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 51692501 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Methionine at position 101 (I101M)

Ref Sequence

ENSEMBL: ENSMUSP00000124065 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000159611] [ENSMUST00000159734] [ENSMUST00000161670] [ENSMUST00000162998]

AlphaFold

O35199

Predicted Effect

probably benign
Transcript: ENSMUST00000159611
AA Change: I101M

PolyPhen 2 Score 0.014 (Sensitivity: 0.96; Specificity: 0.79)

SMART Domains

Protein: ENSMUSP00000124065
Gene: ENSMUSG00000070448
AA Change: I101M

Domain	Start	End	E-Value	Type
signal peptide	1	26	N/A	INTRINSIC
Pfam:ANF_receptor	76	449	4.8e-30	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000159734
AA Change: I101M

PolyPhen 2 Score 0.014 (Sensitivity: 0.96; Specificity: 0.79)

SMART Domains

Protein: ENSMUSP00000124256
Gene: ENSMUSG00000070448
AA Change: I101M

Domain	Start	End	E-Value	Type
signal peptide	1	26	N/A	INTRINSIC
Pfam:ANF_receptor	76	420	1.1e-29	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000161670

SMART Domains

Protein: ENSMUSP00000124261
Gene: ENSMUSG00000070448

Domain	Start	End	E-Value	Type
signal peptide	1	26	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000162998

SMART Domains

Protein: ENSMUSP00000125409
Gene: ENSMUSG00000068399

Domain	Start	End	E-Value	Type
Pfam:Takusan	35	115	2.2e-25	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.3%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 64 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acox2	A	G	14: 8,251,559 (GRCm38)	C313R	probably damaging	Het
Adap2	A	G	11: 80,045,882 (GRCm39)	N54S	probably damaging	Het
Adcy8	T	C	15: 64,694,116 (GRCm39)	D387G	probably damaging	Het
Adgra1	G	A	7: 139,455,716 (GRCm39)	R448Q	probably benign	Het
Antxr1	A	T	6: 87,264,025 (GRCm39)	D148E	probably damaging	Het
Ap3d1	A	T	10: 80,545,627 (GRCm39)	V1034E	probably null	Het
Arpp21	C	T	9: 111,895,066 (GRCm39)	A731T	probably benign	Het
Asl	T	A	5: 130,042,312 (GRCm39)	R255W	probably damaging	Het
Asxl1	T	A	2: 153,239,840 (GRCm39)	S544T	probably damaging	Het
Atp8a1	A	C	5: 67,924,378 (GRCm39)	Y329D		Het
Calcr	A	T	6: 3,711,463 (GRCm39)	I186N	probably damaging	Het
Cdh18	T	C	15: 23,227,065 (GRCm39)		probably null	Het
Celsr3	T	C	9: 108,706,595 (GRCm39)	L1026P	probably damaging	Het
Ces2a	T	A	8: 105,460,774 (GRCm39)	V24E	possibly damaging	Het
Clybl	T	C	14: 122,639,387 (GRCm39)	I317T	probably damaging	Het
Col13a1	T	A	10: 61,699,758 (GRCm39)	T476S	unknown	Het
Cyp4f15	T	C	17: 32,919,205 (GRCm39)	S343P	probably damaging	Het
D630003M21Rik	T	C	2: 158,059,112 (GRCm39)	T263A	probably benign	Het
Fbxo28	A	G	1: 182,157,526 (GRCm39)	V97A	possibly damaging	Het
Frem2	C	T	3: 53,427,486 (GRCm39)	V2889I	probably damaging	Het
Garnl3	T	C	2: 32,895,080 (GRCm39)	E663G	probably damaging	Het
Gen1	T	A	12: 11,299,186 (GRCm39)	K338M	probably damaging	Het
Gfi1	A	G	5: 107,873,819 (GRCm39)		probably null	Het
Gfod2	A	G	8: 106,449,653 (GRCm39)	S95P	probably benign	Het
H2-T13	T	A	17: 36,392,382 (GRCm39)	H31L	unknown	Het
Heatr1	A	G	13: 12,436,266 (GRCm39)	Q1224R	probably damaging	Het
Hectd4	A	G	5: 121,437,551 (GRCm39)	K1059E	possibly damaging	Het
Hmgcs2	C	T	3: 98,198,232 (GRCm39)	A45V	possibly damaging	Het
Hnmt	C	A	2: 23,893,655 (GRCm39)	V280L	probably benign	Het
Ifi35	G	T	11: 101,348,091 (GRCm39)	V66L	probably benign	Het
Kcnn2	T	C	18: 45,694,379 (GRCm39)	I188T	probably damaging	Het
Klhl8	C	A	5: 104,012,111 (GRCm39)	A575S	probably benign	Het
Krt6a	T	C	15: 101,601,446 (GRCm39)	D225G	probably benign	Het
Lrtm2	T	C	6: 119,294,384 (GRCm39)	Y249C	probably damaging	Het
Med12l	C	T	3: 58,984,498 (GRCm39)	R479C	probably damaging	Het
Muc5ac	A	T	7: 141,352,637 (GRCm39)	Y709F	possibly damaging	Het
Nsd2	G	A	5: 34,028,796 (GRCm39)	A162T	probably damaging	Het
Or6c38	A	G	10: 128,929,201 (GRCm39)	M214T	probably benign	Het
Phaf1	C	A	8: 105,957,840 (GRCm39)	Q49K	probably benign	Het
Polr2h	T	C	16: 20,539,285 (GRCm39)	Y90H	possibly damaging	Het
Prkaa1	A	T	15: 5,205,969 (GRCm39)	E275V	probably damaging	Het
Prss22	C	T	17: 24,213,592 (GRCm39)	G233E	probably damaging	Het
Rhcg	A	T	7: 79,244,564 (GRCm39)	L496*	probably null	Het
Rnf213	A	G	11: 119,318,448 (GRCm39)	E1084G		Het
Safb2	ACTTCTTCT	ACTTCT	17: 56,878,292 (GRCm39)		probably benign	Het
Slc14a1	T	A	18: 78,154,598 (GRCm39)	I263F	probably benign	Het
Slc40a1	C	T	1: 45,948,671 (GRCm39)	M536I	possibly damaging	Het
Slco6c1	T	A	1: 96,996,775 (GRCm39)		probably null	Het
Stk32a	T	C	18: 43,394,405 (GRCm39)	F118S	probably damaging	Het
Sytl1	G	T	4: 132,980,934 (GRCm39)	R467S	possibly damaging	Het
Thbs2	T	C	17: 14,896,526 (GRCm39)	I788V	probably benign	Het
Tmed6	T	A	8: 107,788,390 (GRCm39)	R186*	probably null	Het
Trnau1ap	G	A	4: 132,052,565 (GRCm39)	R78C	probably damaging	Het
Trpv1	A	T	11: 73,135,039 (GRCm39)	D412V	possibly damaging	Het
Ttc16	C	T	2: 32,647,329 (GRCm39)	V688M	probably benign	Het
Ubr5	C	A	15: 37,997,420 (GRCm39)	L1738F		Het
Wdr27	C	T	17: 15,148,651 (GRCm39)	R114Q	possibly damaging	Het
Wdr48	A	G	9: 119,749,730 (GRCm39)	H563R	possibly damaging	Het
Wdr49	A	C	3: 75,205,419 (GRCm39)	S666A	probably benign	Het
Wwox	T	C	8: 115,433,110 (GRCm39)	S259P	probably damaging	Het
Zfp160	T	A	17: 21,240,354 (GRCm39)	D12E	possibly damaging	Het
Zfp800	A	G	6: 28,243,172 (GRCm39)	Y598H	probably benign	Het
Zfp970	T	C	2: 177,167,536 (GRCm39)	L370P	probably damaging	Het
Zmat5	A	T	11: 4,672,431 (GRCm39)	D16V	probably damaging	Het

Other mutations in Vmn2r89

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00433:Vmn2r89	APN	14	51,692,422 (GRCm39)	missense	probably damaging	1.00
IGL00990:Vmn2r89	APN	14	51,694,950 (GRCm39)	missense	probably benign
IGL00990:Vmn2r89	APN	14	51,693,428 (GRCm39)	missense	probably benign	0.14
IGL01991:Vmn2r89	APN	14	51,689,676 (GRCm39)	missense	probably benign	0.00
IGL03073:Vmn2r89	APN	14	51,693,528 (GRCm39)	missense	possibly damaging	0.95
IGL03085:Vmn2r89	APN	14	51,689,615 (GRCm39)	missense	probably damaging	0.99
IGL03278:Vmn2r89	APN	14	51,692,557 (GRCm39)	missense	probably damaging	0.99
R0115:Vmn2r89	UTSW	14	51,693,577 (GRCm39)	missense	probably damaging	1.00
R0127:Vmn2r89	UTSW	14	51,693,160 (GRCm39)	missense	probably damaging	0.98
R0391:Vmn2r89	UTSW	14	51,693,435 (GRCm39)	missense	probably damaging	0.99
R0481:Vmn2r89	UTSW	14	51,693,577 (GRCm39)	missense	probably damaging	1.00
R0538:Vmn2r89	UTSW	14	51,695,048 (GRCm39)	splice site	probably null
R1210:Vmn2r89	UTSW	14	51,692,427 (GRCm39)	missense	probably benign	0.01
R1332:Vmn2r89	UTSW	14	51,692,559 (GRCm39)	missense	probably benign	0.00
R1660:Vmn2r89	UTSW	14	51,693,693 (GRCm39)	missense	possibly damaging	0.48
R1959:Vmn2r89	UTSW	14	51,694,897 (GRCm39)	missense	probably benign	0.22
R2876:Vmn2r89	UTSW	14	51,692,541 (GRCm39)	missense	possibly damaging	0.47
R3410:Vmn2r89	UTSW	14	51,693,628 (GRCm39)	missense	probably damaging	0.98
R4026:Vmn2r89	UTSW	14	51,689,500 (GRCm39)	start codon destroyed	probably null	1.00
R4398:Vmn2r89	UTSW	14	51,689,551 (GRCm39)	missense	probably damaging	1.00
R4700:Vmn2r89	UTSW	14	51,694,942 (GRCm39)	missense	probably damaging	1.00
R4714:Vmn2r89	UTSW	14	51,689,688 (GRCm39)	missense	probably damaging	0.97
R5162:Vmn2r89	UTSW	14	51,693,620 (GRCm39)	missense	possibly damaging	0.88
R5294:Vmn2r89	UTSW	14	51,692,570 (GRCm39)	missense	probably benign	0.00
R5811:Vmn2r89	UTSW	14	51,693,565 (GRCm39)	missense	probably benign	0.12
R6087:Vmn2r89	UTSW	14	51,695,033 (GRCm39)	splice site	probably null
R6229:Vmn2r89	UTSW	14	51,693,178 (GRCm39)	missense	probably benign	0.05
R6246:Vmn2r89	UTSW	14	51,693,503 (GRCm39)	missense	probably damaging	1.00
R6572:Vmn2r89	UTSW	14	51,693,450 (GRCm39)	missense	probably damaging	1.00
R7351:Vmn2r89	UTSW	14	51,693,739 (GRCm39)	missense	probably benign	0.30
R7683:Vmn2r89	UTSW	14	51,692,651 (GRCm39)	missense	probably benign
R7974:Vmn2r89	UTSW	14	51,693,459 (GRCm39)	missense	probably damaging	1.00
R8047:Vmn2r89	UTSW	14	51,692,549 (GRCm39)	missense	probably benign	0.05
R8093:Vmn2r89	UTSW	14	51,693,699 (GRCm39)	missense	probably benign	0.00
R8348:Vmn2r89	UTSW	14	51,692,548 (GRCm39)	missense	possibly damaging	0.90
R8723:Vmn2r89	UTSW	14	51,693,910 (GRCm39)	missense	probably benign
R8737:Vmn2r89	UTSW	14	51,693,722 (GRCm39)	missense	probably damaging	1.00
R8859:Vmn2r89	UTSW	14	51,693,170 (GRCm39)	missense	probably benign
R9197:Vmn2r89	UTSW	14	51,693,596 (GRCm39)	missense	possibly damaging	0.70
R9377:Vmn2r89	UTSW	14	51,692,601 (GRCm39)	missense	probably benign	0.02
R9395:Vmn2r89	UTSW	14	51,693,783 (GRCm39)	missense	probably damaging	1.00
R9452:Vmn2r89	UTSW	14	51,693,288 (GRCm39)	missense	probably damaging	0.99
R9457:Vmn2r89	UTSW	14	51,693,469 (GRCm39)	missense	probably damaging	0.99
R9678:Vmn2r89	UTSW	14	51,693,511 (GRCm39)	missense	probably benign	0.09
X0019:Vmn2r89	UTSW	14	51,693,872 (GRCm39)	missense	possibly damaging	0.95

Predicted Primers

PCR Primer
(F):5'- TCTAGTTCAAGGATGGCATTGAG -3'
(R):5'- CCATTGGTATTGAAGAATCCATTGC -3'

Sequencing Primer
(F):5'- TTCAAGGATGGCATTGAGATAAAAC -3'
(R):5'- GAAGAATCCATTGCCAGTTTTAAGG -3'

Posted On

2022-02-07