Incidental Mutation 'R9199:Vmn2r104'
ID 698128
Institutional Source Beutler Lab
Gene Symbol Vmn2r104
Ensembl Gene ENSMUSG00000090315
Gene Name vomeronasal 2, receptor 104
Synonyms V2r7
MMRRC Submission
Accession Numbers
Essential gene? Probably non essential (E-score: 0.108) question?
Stock # R9199 (G1)
Quality Score 225.009
Status Validated
Chromosome 17
Chromosomal Location 20249687-20268467 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 20262097 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Asparagine to Lysine at position 344 (N344K)
Ref Sequence ENSEMBL: ENSMUSP00000129895 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000168050]
AlphaFold E9Q2J5
Predicted Effect probably damaging
Transcript: ENSMUST00000168050
AA Change: N344K

PolyPhen 2 Score 0.990 (Sensitivity: 0.72; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000129895
Gene: ENSMUSG00000090315
AA Change: N344K

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 85 457 4e-38 PFAM
Pfam:NCD3G 512 565 2.1e-20 PFAM
Pfam:7tm_3 598 833 1.7e-52 PFAM
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.8%
  • 20x: 99.3%
Validation Efficiency 100% (51/51)
Allele List at MGI
Other mutations in this stock
Total: 53 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1110057P08Rik A T 16: 88,971,654 (GRCm39) probably benign Het
Abca9 A T 11: 110,056,770 (GRCm39) C17S possibly damaging Het
Acan T G 7: 78,736,057 (GRCm39) F168V probably damaging Het
Acp7 A G 7: 28,316,591 (GRCm39) L128P probably benign Het
Agtpbp1 C A 13: 59,613,808 (GRCm39) M1044I probably benign Het
Arhgef3 A G 14: 27,122,244 (GRCm39) Q361R possibly damaging Het
Brdt A T 5: 107,498,029 (GRCm39) R235* probably null Het
Cacna1d A G 14: 29,764,893 (GRCm39) S2013P probably benign Het
Cacna2d4 T A 6: 119,244,787 (GRCm39) D274E probably benign Het
Ccdc24 T A 4: 117,728,313 (GRCm39) I144F probably null Het
Ceacam5 C G 7: 17,479,350 (GRCm39) L156V probably benign Het
Cenpn G A 8: 117,664,014 (GRCm39) probably null Het
Cfap69 A T 5: 5,668,952 (GRCm39) V385E possibly damaging Het
Cldnd1 A G 16: 58,553,070 (GRCm39) H177R probably damaging Het
Cr1l A T 1: 194,786,177 (GRCm39) V439D probably benign Het
Cul2 A G 18: 3,423,577 (GRCm39) N329S probably benign Het
Cyp2c66 A G 19: 39,130,800 (GRCm39) K138R probably benign Het
Ddx46 G A 13: 55,825,342 (GRCm39) E996K probably damaging Het
Dnah14 A G 1: 181,478,566 (GRCm39) K1444E possibly damaging Het
Evl G A 12: 108,647,814 (GRCm39) probably null Het
Flnc C T 6: 29,441,490 (GRCm39) T424I probably benign Het
Gadd45gip1 T A 8: 85,559,128 (GRCm39) V70E probably damaging Het
Garem2 A G 5: 30,319,471 (GRCm39) H311R probably damaging Het
Gm32742 G C 9: 51,060,607 (GRCm39) H899D possibly damaging Het
Gm5148 C T 3: 37,768,989 (GRCm39) C77Y probably benign Het
Gm5460 A G 14: 33,758,393 (GRCm39) D141G possibly damaging Het
Kcnj8 T C 6: 142,512,118 (GRCm39) N163S probably damaging Het
Klri1 A T 6: 129,674,264 (GRCm39) *249R probably null Het
Kmt5b A G 19: 3,865,525 (GRCm39) D863G probably damaging Het
Ltbp2 G T 12: 84,832,750 (GRCm39) T1538K probably benign Het
Or51ah3 G A 7: 103,210,143 (GRCm39) G153D probably damaging Het
Or5b120 A G 19: 13,480,436 (GRCm39) H243R probably damaging Het
Pheta2 A T 15: 82,227,877 (GRCm39) E132V probably damaging Het
Pramel16 A G 4: 143,675,656 (GRCm39) L390P probably damaging Het
Ptchd3 A G 11: 121,721,741 (GRCm39) I205V probably benign Het
Rab8b G A 9: 66,758,641 (GRCm39) A152V probably damaging Het
Rasef T C 4: 73,658,625 (GRCm39) D343G possibly damaging Het
Rcan2 G A 17: 44,264,423 (GRCm39) V28I probably benign Het
Sec1 G A 7: 45,328,009 (GRCm39) T346M probably benign Het
Sgk1 T A 10: 21,758,558 (GRCm39) N7K probably damaging Het
Slc39a12 A T 2: 14,394,321 (GRCm39) I64F possibly damaging Het
Spock3 A G 8: 63,798,764 (GRCm39) T259A probably damaging Het
Sypl1 A T 12: 33,016,463 (GRCm39) probably benign Het
Teddm2 G T 1: 153,726,767 (GRCm39) Q36K probably damaging Het
Tlr1 A G 5: 65,083,534 (GRCm39) S348P possibly damaging Het
Ttll12 A G 15: 83,466,559 (GRCm39) F336S probably damaging Het
Ttll8 G A 15: 88,798,818 (GRCm39) P639L probably benign Het
Usp24 T C 4: 106,244,681 (GRCm39) V1212A probably damaging Het
Vcan C A 13: 89,838,615 (GRCm39) G2310* probably null Het
Zfp281 A G 1: 136,553,643 (GRCm39) N207S probably benign Het
Zfp534 T A 4: 147,760,439 (GRCm39) M77L probably benign Het
Zfp819 G A 7: 43,267,203 (GRCm39) S562N probably benign Het
Zmym1 C T 4: 126,944,623 (GRCm39) C188Y possibly damaging Het
Other mutations in Vmn2r104
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00427:Vmn2r104 APN 17 20,258,501 (GRCm39) missense probably damaging 0.98
IGL01098:Vmn2r104 APN 17 20,268,358 (GRCm39) missense probably benign 0.27
IGL01333:Vmn2r104 APN 17 20,263,055 (GRCm39) missense probably benign 0.17
IGL01527:Vmn2r104 APN 17 20,263,158 (GRCm39) missense possibly damaging 0.82
IGL01773:Vmn2r104 APN 17 20,260,930 (GRCm39) missense probably benign 0.10
IGL01939:Vmn2r104 APN 17 20,250,187 (GRCm39) missense probably damaging 0.99
IGL02121:Vmn2r104 APN 17 20,262,056 (GRCm39) nonsense probably null
IGL02305:Vmn2r104 APN 17 20,263,118 (GRCm39) missense probably benign 0.09
IGL02374:Vmn2r104 APN 17 20,263,048 (GRCm39) missense probably benign 0.34
IGL03260:Vmn2r104 APN 17 20,263,083 (GRCm39) missense probably benign 0.05
IGL03366:Vmn2r104 APN 17 20,249,866 (GRCm39) missense probably damaging 1.00
R0091:Vmn2r104 UTSW 17 20,262,075 (GRCm39) missense possibly damaging 0.79
R0125:Vmn2r104 UTSW 17 20,250,069 (GRCm39) missense probably damaging 0.98
R0257:Vmn2r104 UTSW 17 20,249,889 (GRCm39) missense probably damaging 1.00
R0381:Vmn2r104 UTSW 17 20,268,264 (GRCm39) nonsense probably null
R0709:Vmn2r104 UTSW 17 20,263,166 (GRCm39) missense probably damaging 1.00
R0786:Vmn2r104 UTSW 17 20,262,987 (GRCm39) missense probably benign
R1575:Vmn2r104 UTSW 17 20,262,477 (GRCm39) missense probably damaging 1.00
R1827:Vmn2r104 UTSW 17 20,262,497 (GRCm39) missense probably damaging 0.97
R1932:Vmn2r104 UTSW 17 20,261,031 (GRCm39) missense probably damaging 1.00
R1956:Vmn2r104 UTSW 17 20,262,313 (GRCm39) missense probably damaging 0.98
R2203:Vmn2r104 UTSW 17 20,250,083 (GRCm39) missense probably benign 0.05
R2205:Vmn2r104 UTSW 17 20,250,083 (GRCm39) missense probably benign 0.05
R2859:Vmn2r104 UTSW 17 20,268,455 (GRCm39) missense possibly damaging 0.82
R3701:Vmn2r104 UTSW 17 20,249,818 (GRCm39) missense probably damaging 1.00
R3834:Vmn2r104 UTSW 17 20,250,183 (GRCm39) missense probably benign 0.02
R4151:Vmn2r104 UTSW 17 20,250,147 (GRCm39) missense probably damaging 1.00
R4470:Vmn2r104 UTSW 17 20,262,503 (GRCm39) missense probably damaging 1.00
R4625:Vmn2r104 UTSW 17 20,268,443 (GRCm39) missense probably benign 0.00
R4754:Vmn2r104 UTSW 17 20,261,030 (GRCm39) nonsense probably null
R4911:Vmn2r104 UTSW 17 20,250,288 (GRCm39) missense probably benign 0.00
R5270:Vmn2r104 UTSW 17 20,258,528 (GRCm39) missense probably damaging 1.00
R5279:Vmn2r104 UTSW 17 20,262,146 (GRCm39) missense probably benign 0.07
R5311:Vmn2r104 UTSW 17 20,250,163 (GRCm39) missense probably damaging 1.00
R5370:Vmn2r104 UTSW 17 20,250,450 (GRCm39) missense probably damaging 0.97
R5461:Vmn2r104 UTSW 17 20,250,343 (GRCm39) missense probably damaging 1.00
R5683:Vmn2r104 UTSW 17 20,260,981 (GRCm39) nonsense probably null
R5795:Vmn2r104 UTSW 17 20,250,544 (GRCm39) missense possibly damaging 0.89
R5795:Vmn2r104 UTSW 17 20,250,372 (GRCm39) missense probably benign 0.02
R5970:Vmn2r104 UTSW 17 20,249,733 (GRCm39) missense probably benign 0.01
R5983:Vmn2r104 UTSW 17 20,261,970 (GRCm39) missense probably damaging 1.00
R5992:Vmn2r104 UTSW 17 20,249,747 (GRCm39) missense probably damaging 1.00
R6066:Vmn2r104 UTSW 17 20,258,573 (GRCm39) missense possibly damaging 0.69
R6156:Vmn2r104 UTSW 17 20,261,909 (GRCm39) missense probably damaging 1.00
R6182:Vmn2r104 UTSW 17 20,250,507 (GRCm39) missense probably benign 0.16
R6245:Vmn2r104 UTSW 17 20,261,829 (GRCm39) missense possibly damaging 0.69
R6333:Vmn2r104 UTSW 17 20,249,848 (GRCm39) missense probably benign 0.30
R6573:Vmn2r104 UTSW 17 20,262,487 (GRCm39) missense probably damaging 1.00
R7101:Vmn2r104 UTSW 17 20,250,358 (GRCm39) missense possibly damaging 0.65
R7123:Vmn2r104 UTSW 17 20,261,088 (GRCm39) missense probably benign 0.12
R7485:Vmn2r104 UTSW 17 20,249,737 (GRCm39) missense probably benign 0.01
R7514:Vmn2r104 UTSW 17 20,249,791 (GRCm39) missense probably damaging 1.00
R7634:Vmn2r104 UTSW 17 20,261,971 (GRCm39) missense possibly damaging 0.48
R7958:Vmn2r104 UTSW 17 20,262,988 (GRCm39) missense probably benign
R8031:Vmn2r104 UTSW 17 20,263,048 (GRCm39) missense probably benign 0.34
R8094:Vmn2r104 UTSW 17 20,250,483 (GRCm39) missense possibly damaging 0.77
R8191:Vmn2r104 UTSW 17 20,250,465 (GRCm39) missense possibly damaging 0.89
R8308:Vmn2r104 UTSW 17 20,261,040 (GRCm39) missense possibly damaging 0.55
R8691:Vmn2r104 UTSW 17 20,262,110 (GRCm39) missense probably damaging 0.98
R8795:Vmn2r104 UTSW 17 20,262,988 (GRCm39) missense probably benign
R8900:Vmn2r104 UTSW 17 20,261,924 (GRCm39) missense probably damaging 0.99
R8913:Vmn2r104 UTSW 17 20,249,968 (GRCm39) missense probably damaging 1.00
R9180:Vmn2r104 UTSW 17 20,263,087 (GRCm39) missense probably benign 0.00
R9282:Vmn2r104 UTSW 17 20,261,098 (GRCm39) missense probably damaging 1.00
R9303:Vmn2r104 UTSW 17 20,268,439 (GRCm39) missense possibly damaging 0.90
R9305:Vmn2r104 UTSW 17 20,268,439 (GRCm39) missense possibly damaging 0.90
R9322:Vmn2r104 UTSW 17 20,263,087 (GRCm39) missense probably benign 0.00
R9325:Vmn2r104 UTSW 17 20,268,433 (GRCm39) missense possibly damaging 0.95
R9414:Vmn2r104 UTSW 17 20,250,250 (GRCm39) missense probably damaging 0.99
R9785:Vmn2r104 UTSW 17 20,268,409 (GRCm39) missense probably benign
RF007:Vmn2r104 UTSW 17 20,268,302 (GRCm39) missense probably benign 0.36
Z1177:Vmn2r104 UTSW 17 20,250,051 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- GAGCCAGAGCATATACACCATTG -3'
(R):5'- ATGATCCCAGCCACATGGAC -3'

Sequencing Primer
(F):5'- CACCATTGTAAATGTTTGTGCTC -3'
(R):5'- GCCACATGGACCTCATATTTTACTAG -3'
Posted On 2022-02-07