Mutagenetix > Incidental Mutation

Incidental Mutation 'R9209:Or52ae9'

698713

Institutional Source

Beutler Lab

Gene Symbol

Or52ae9

Ensembl Gene

ENSMUSG00000047545

Gene Name

olfactory receptor family 52 subfamily AE member 9

Synonyms

Olfr629, GA_x6K02T2PBJ9-6466772-6465828, MOR26-2

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.103) question?

Stock #

R9209 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

103389408-103390529 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 103390319 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Cysteine at position 43 (S43C)

Ref Sequence

ENSEMBL: ENSMUSP00000149272 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000051346] [ENSMUST00000213906] [ENSMUST00000216300]

AlphaFold

Q0VBH3

Predicted Effect

probably benign
Transcript: ENSMUST00000051346
AA Change: S43C

PolyPhen 2 Score 0.122 (Sensitivity: 0.93; Specificity: 0.86)

SMART Domains

Protein: ENSMUSP00000052662
Gene: ENSMUSG00000047545
AA Change: S43C

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	311	4.9e-103	PFAM
Pfam:7TM_GPCR_Srsx	35	307	1.6e-6	PFAM
Pfam:7tm_1	41	292	5.7e-15	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000213906
AA Change: S43C

PolyPhen 2 Score 0.122 (Sensitivity: 0.93; Specificity: 0.86)

Predicted Effect

probably benign
Transcript: ENSMUST00000216300
AA Change: S43C

PolyPhen 2 Score 0.122 (Sensitivity: 0.93; Specificity: 0.86)

Meta Mutation Damage Score

0.0846

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.7%

Validation Efficiency

96% (73/76)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 77 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2610021A01Rik	T	A	7: 41,275,837 (GRCm39)	N513K	possibly damaging	Het
Actl6a	T	A	3: 32,779,469 (GRCm39)	I399N	probably damaging	Het
Adamts5	A	G	16: 85,666,971 (GRCm39)	V507A	probably damaging	Het
Ap3d1	A	G	10: 80,554,918 (GRCm39)	V469A	probably benign	Het
Arhgef4	G	T	1: 34,764,241 (GRCm39)		probably null	Het
Arhgef4	A	T	1: 34,849,576 (GRCm39)	Q389L	probably benign	Het
Atad2	A	G	15: 57,980,194 (GRCm39)	V106A	possibly damaging	Het
Azin2	T	C	4: 128,841,341 (GRCm39)	E275G	probably damaging	Het
Bhlhe23	A	G	2: 180,418,143 (GRCm39)	S132P	probably damaging	Het
Capn12	A	G	7: 28,581,243 (GRCm39)	Y32C	probably damaging	Het
Celsr2	A	T	3: 108,321,349 (GRCm39)	S488T	probably benign	Het
Cenpx	A	G	11: 120,602,582 (GRCm39)	V27A	possibly damaging	Het
Clca3a2	G	A	3: 144,778,005 (GRCm39)	P760L	probably benign	Het
Clstn3	T	C	6: 124,408,571 (GRCm39)	S951G	probably benign	Het
Clybl	C	A	14: 122,621,670 (GRCm39)	P286Q	probably benign	Het
Cmya5	T	A	13: 93,226,866 (GRCm39)	M2741L	probably benign	Het
Cntnap2	G	A	6: 47,026,183 (GRCm39)	G944E	probably damaging	Het
Col8a1	A	C	16: 57,447,283 (GRCm39)	Y742*	probably null	Het
Crb1	T	C	1: 139,171,051 (GRCm39)	K780E	probably damaging	Het
Crygc	T	A	1: 65,112,376 (GRCm39)	Y66F	probably benign	Het
Cyp2b9	G	A	7: 25,873,004 (GRCm39)	G49E	possibly damaging	Het
D130043K22Rik	T	C	13: 25,041,090 (GRCm39)	S171P	possibly damaging	Het
Dhx36	T	C	3: 62,378,895 (GRCm39)	I890V	probably benign	Het
Dpp9	C	T	17: 56,512,765 (GRCm39)	G148S	probably damaging	Het
Eml6	G	T	11: 29,781,175 (GRCm39)	S619Y	probably damaging	Het
Enpp4	A	T	17: 44,412,252 (GRCm39)	L319*	probably null	Het
Esyt1	T	C	10: 128,361,356 (GRCm39)	S113G	probably benign	Het
Fat1	A	G	8: 45,404,791 (GRCm39)	D514G	possibly damaging	Het
Fbxo16	G	A	14: 65,524,594 (GRCm39)	R38Q	probably damaging	Het
Fchsd1	A	T	18: 38,092,706 (GRCm39)	M668K	unknown	Het
Gpr149	C	T	3: 62,511,093 (GRCm39)	S302N	probably benign	Het
Gsap	A	G	5: 21,433,064 (GRCm39)	K258E	probably benign	Het
Helq	C	A	5: 100,939,218 (GRCm39)	V443F	probably benign	Het
Helq	T	A	5: 100,939,219 (GRCm39)	K442N	probably damaging	Het
Ighv1-37	T	C	12: 114,860,123 (GRCm39)	E29G	possibly damaging	Het
Ighv1-9	C	A	12: 114,547,620 (GRCm39)	M1I	probably null	Het
Itga6	T	G	2: 71,671,477 (GRCm39)	F743V	probably benign	Het
Lpin1	C	A	12: 16,588,548 (GRCm39)	D881Y		Het
Lypd8	T	A	11: 58,273,640 (GRCm39)	C40S	possibly damaging	Het
Macf1	C	T	4: 123,326,227 (GRCm39)	R5092Q	probably damaging	Het
Mcm7	A	G	5: 138,166,593 (GRCm39)		probably null	Het
Micall2	G	A	5: 139,696,170 (GRCm39)	T831I	unknown	Het
Myo18b	A	T	5: 113,022,927 (GRCm39)	M155K	unknown	Het
Nckap5	T	A	1: 125,867,928 (GRCm39)	H201L	unknown	Het
Ndst2	A	T	14: 20,779,240 (GRCm39)	D333E	possibly damaging	Het
Nlgn1	A	G	3: 25,966,804 (GRCm39)		probably null	Het
Nup188	T	G	2: 30,232,397 (GRCm39)	Y1483D	probably benign	Het
Or4c109	A	C	2: 88,818,057 (GRCm39)	L163*	probably null	Het
Or52n4b	A	C	7: 108,144,664 (GRCm39)	I311L	probably benign	Het
Or5p66	T	A	7: 107,885,526 (GRCm39)	Y269F	probably benign	Het
Or8g33	T	A	9: 39,337,635 (GRCm39)	H244L	probably damaging	Het
Peg3	A	C	7: 6,711,226 (GRCm39)	I1332S	possibly damaging	Het
Piezo2	T	C	18: 63,154,372 (GRCm39)	K2469R	probably damaging	Het
Pik3cg	T	C	12: 32,247,312 (GRCm39)	M804V	probably damaging	Het
Polq	A	T	16: 36,869,011 (GRCm39)	I794F	possibly damaging	Het
Rasgef1b	A	G	5: 99,370,191 (GRCm39)	V437A	probably benign	Het
Rdm1	T	A	11: 101,518,857 (GRCm39)	D21E	probably benign	Het
Ripk4	G	T	16: 97,551,311 (GRCm39)	Q219K	possibly damaging	Het
Ropn1l	T	C	15: 31,441,471 (GRCm39)	I217V		Het
Sdf2	T	C	11: 78,136,858 (GRCm39)	S13P	unknown	Het
Selenbp1	A	G	3: 94,847,079 (GRCm39)	T202A	probably benign	Het
Slfn5	T	C	11: 82,850,933 (GRCm39)	F410S	possibly damaging	Het
Srrm2	A	G	17: 24,039,880 (GRCm39)	T2175A	probably benign	Het
St6galnac3	T	C	3: 153,117,360 (GRCm39)	Y121C	possibly damaging	Het
Stat1	A	G	1: 52,184,337 (GRCm39)	N417S	probably benign	Het
Tead1	T	C	7: 112,475,378 (GRCm39)	F276L	probably damaging	Het
Teddm3	A	T	16: 20,971,737 (GRCm39)	S277R	probably benign	Het
Tmc2	A	G	2: 130,103,317 (GRCm39)		probably null	Het
Tmem156	G	A	5: 65,231,127 (GRCm39)	L248F	probably damaging	Het
Tnn	T	C	1: 159,953,986 (GRCm39)	S590G	probably benign	Het
Trmt44	A	G	5: 35,731,422 (GRCm39)		probably null	Het
Upp2	T	A	2: 58,668,022 (GRCm39)	Y238*	probably null	Het
Usp32	T	C	11: 84,930,838 (GRCm39)	T531A	probably damaging	Het
Vmn2r78	A	T	7: 86,569,431 (GRCm39)	D108V	probably benign	Het
Wdfy3	G	T	5: 102,078,830 (GRCm39)	A824E	probably benign	Het
Xylt1	T	C	7: 117,255,870 (GRCm39)	V814A	probably benign	Het
Zfy1	C	T	Y: 732,990 (GRCm39)	R281H	unknown	Het

Other mutations in Or52ae9

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00965:Or52ae9	APN	7	103,390,172 (GRCm39)	missense	probably benign	0.03
IGL01531:Or52ae9	APN	7	103,390,321 (GRCm39)	missense	probably damaging	1.00
IGL02263:Or52ae9	APN	7	103,390,262 (GRCm39)	missense	probably damaging	1.00
IGL02543:Or52ae9	APN	7	103,389,710 (GRCm39)	missense	possibly damaging	0.50
BB005:Or52ae9	UTSW	7	103,390,397 (GRCm39)	missense	probably damaging	1.00
BB015:Or52ae9	UTSW	7	103,390,397 (GRCm39)	missense	probably damaging	1.00
R0744:Or52ae9	UTSW	7	103,390,132 (GRCm39)	missense	probably damaging	1.00
R0836:Or52ae9	UTSW	7	103,390,132 (GRCm39)	missense	probably damaging	1.00
R1509:Or52ae9	UTSW	7	103,390,243 (GRCm39)	missense	probably benign	0.12
R1671:Or52ae9	UTSW	7	103,389,617 (GRCm39)	missense	possibly damaging	0.73
R1781:Or52ae9	UTSW	7	103,390,028 (GRCm39)	missense	probably benign	0.00
R1848:Or52ae9	UTSW	7	103,390,381 (GRCm39)	missense	probably benign	0.08
R3930:Or52ae9	UTSW	7	103,389,794 (GRCm39)	missense	probably damaging	1.00
R4125:Or52ae9	UTSW	7	103,390,207 (GRCm39)	missense	probably benign	0.22
R5321:Or52ae9	UTSW	7	103,389,862 (GRCm39)	missense	probably damaging	0.97
R6141:Or52ae9	UTSW	7	103,389,994 (GRCm39)	missense	probably damaging	1.00
R6232:Or52ae9	UTSW	7	103,389,661 (GRCm39)	missense	probably damaging	1.00
R6489:Or52ae9	UTSW	7	103,389,875 (GRCm39)	missense	probably benign	0.09
R6755:Or52ae9	UTSW	7	103,389,707 (GRCm39)	missense	probably damaging	0.99
R7526:Or52ae9	UTSW	7	103,389,607 (GRCm39)	missense	probably damaging	1.00
R7928:Or52ae9	UTSW	7	103,390,397 (GRCm39)	missense	probably damaging	1.00
R8839:Or52ae9	UTSW	7	103,390,021 (GRCm39)	missense	probably benign	0.00
R8890:Or52ae9	UTSW	7	103,389,675 (GRCm39)	missense	probably damaging	1.00
Z1177:Or52ae9	UTSW	7	103,390,275 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TGTGTTAGACAGGCATCAAAGTTG -3'
(R):5'- CACTCATATTTTCTGCCTGATGGG -3'

Sequencing Primer
(F):5'- CAGGCATCAAAGTTGATCCAATG -3'
(R):5'- CTTCCTGGTTGGTATTCCTG -3'

Posted On

2022-02-07