Incidental Mutation 'R9218:Tecpr1'
| ID |
699308 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Tecpr1
|
| Ensembl Gene |
ENSMUSG00000066621 |
| Gene Name |
tectonin beta-propeller repeat containing 1 |
| Synonyms |
2210010N04Rik |
| MMRRC Submission |
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R9218 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
5 |
| Chromosomal Location |
144131260-144160433 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 144154049 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Lysine to Glutamic Acid
at position 135
(K135E)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000082844
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000085701]
|
| AlphaFold |
Q80VP0 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000085701
AA Change: K135E
PolyPhen 2
Score 0.696 (Sensitivity: 0.86; Specificity: 0.92)
|
| SMART Domains |
Protein: ENSMUSP00000082844
Gene: ENSMUSG00000066621
AA Change: K135E
| Domain | Start | End | E-Value | Type |
|---|
|
TECPR
|
23 |
59 |
8.98e1 |
SMART |
|
DysFN
|
64 |
125 |
6.72e-24 |
SMART |
|
DysFC
|
137 |
170 |
1.89e-9 |
SMART |
|
TECPR
|
192 |
225 |
1.79e-1 |
SMART |
|
TECPR
|
234 |
270 |
2.5e-9 |
SMART |
|
TECPR
|
279 |
317 |
4.99e-9 |
SMART |
|
TECPR
|
326 |
361 |
2.42e-7 |
SMART |
|
low complexity region
|
381 |
394 |
N/A |
INTRINSIC |
|
PH
|
614 |
724 |
1.69e-2 |
SMART |
|
TECPR
|
711 |
750 |
1.88e-4 |
SMART |
|
TECPR
|
766 |
800 |
3.27e-4 |
SMART |
|
DysFN
|
821 |
882 |
2.95e-20 |
SMART |
|
DysFC
|
893 |
926 |
1.66e-14 |
SMART |
|
TECPR
|
940 |
974 |
1.69e1 |
SMART |
|
TECPR
|
983 |
1019 |
1.45e-5 |
SMART |
|
TECPR
|
1028 |
1065 |
1.51e-8 |
SMART |
|
TECPR
|
1074 |
1109 |
1.59e-2 |
SMART |
|
low complexity region
|
1125 |
1137 |
N/A |
INTRINSIC |
|
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.7%
- 20x: 99.1%
|
| Validation Efficiency |
93% (57/61) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a tethering factor involved in autophagy. The encoded protein is found at autolysosomes, and is involved in targeting protein aggregates, damaged mitochondria, and bacterial pathogens for autophagy [provided by RefSeq, Nov 2012]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit impaired selective autophagy and abnormal response to bacterial infection in MEFs. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 60 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 4833420G17Rik |
A |
G |
13: 119,610,460 (GRCm39) |
T378A |
probably damaging |
Het |
| Abcb4 |
A |
G |
5: 8,977,960 (GRCm39) |
M513V |
probably benign |
Het |
| Abhd18 |
T |
C |
3: 40,871,201 (GRCm39) |
|
probably null |
Het |
| Adamtsl4 |
A |
T |
3: 95,588,404 (GRCm39) |
Y561* |
probably null |
Het |
| Alx4 |
T |
A |
2: 93,473,172 (GRCm39) |
F57I |
possibly damaging |
Het |
| Ap3b1 |
A |
G |
13: 94,584,959 (GRCm39) |
|
probably null |
Het |
| Arsj |
A |
C |
3: 126,232,114 (GRCm39) |
N287H |
probably benign |
Het |
| Bltp3a |
T |
A |
17: 28,114,529 (GRCm39) |
C1387S |
probably benign |
Het |
| Cabp4 |
T |
A |
19: 4,188,693 (GRCm39) |
|
probably null |
Het |
| Cdcp3 |
C |
T |
7: 130,863,728 (GRCm39) |
H1244Y |
unknown |
Het |
| Cdh6 |
T |
C |
15: 13,057,556 (GRCm39) |
N255S |
probably null |
Het |
| Ctrb1 |
C |
T |
8: 112,416,140 (GRCm39) |
V49M |
probably damaging |
Het |
| Cts3 |
A |
G |
13: 61,716,583 (GRCm39) |
S18P |
possibly damaging |
Het |
| Dcst1 |
A |
T |
3: 89,272,412 (GRCm39) |
I17N |
probably benign |
Het |
| Dennd5a |
G |
A |
7: 109,507,592 (GRCm39) |
H823Y |
probably damaging |
Het |
| Dmrt2 |
T |
G |
19: 25,651,066 (GRCm39) |
L84R |
possibly damaging |
Het |
| Dock9 |
G |
T |
14: 121,905,871 (GRCm39) |
T93K |
probably damaging |
Het |
| Fsip2 |
C |
T |
2: 82,823,062 (GRCm39) |
P6265L |
probably damaging |
Het |
| Fxn |
T |
A |
19: 24,239,388 (GRCm39) |
K168M |
probably damaging |
Het |
| Hc |
A |
G |
2: 34,922,203 (GRCm39) |
L541P |
probably damaging |
Het |
| Hsd3b5 |
T |
C |
3: 98,526,354 (GRCm39) |
H364R |
probably benign |
Het |
| Il18rap |
C |
T |
1: 40,582,177 (GRCm39) |
T366M |
probably benign |
Het |
| Inf2 |
G |
A |
12: 112,567,858 (GRCm39) |
D163N |
possibly damaging |
Het |
| Iqcd |
C |
T |
5: 120,738,707 (GRCm39) |
P175L |
possibly damaging |
Het |
| Iqck |
C |
T |
7: 118,540,902 (GRCm39) |
A267V |
probably damaging |
Het |
| Kcnh1 |
A |
T |
1: 192,135,938 (GRCm39) |
N66I |
unknown |
Het |
| Kif16b |
T |
A |
2: 142,541,583 (GRCm39) |
E1239V |
possibly damaging |
Het |
| Mctp1 |
A |
G |
13: 76,871,816 (GRCm39) |
D362G |
possibly damaging |
Het |
| Muc5ac |
T |
A |
7: 141,361,098 (GRCm39) |
S1470T |
probably damaging |
Het |
| Neb |
A |
G |
2: 52,183,638 (GRCm39) |
|
probably null |
Het |
| Odc1 |
T |
A |
12: 17,598,312 (GRCm39) |
L151* |
probably null |
Het |
| Or4e1 |
A |
T |
14: 52,700,788 (GRCm39) |
V226E |
probably damaging |
Het |
| Or51f23c-ps1 |
T |
C |
7: 102,431,373 (GRCm39) |
I230T |
possibly damaging |
Het |
| Otof |
T |
A |
5: 30,542,469 (GRCm39) |
Q693L |
probably benign |
Het |
| Pitpnm2 |
G |
A |
5: 124,265,344 (GRCm39) |
S753F |
probably damaging |
Het |
| Pkd1l3 |
C |
A |
8: 110,382,128 (GRCm39) |
S1632* |
probably null |
Het |
| Pkhd1l1 |
A |
G |
15: 44,384,122 (GRCm39) |
T1171A |
possibly damaging |
Het |
| Plpp2 |
A |
G |
10: 79,366,501 (GRCm39) |
F104L |
probably damaging |
Het |
| Pmaip1 |
A |
G |
18: 66,596,370 (GRCm39) |
R80G |
probably damaging |
Het |
| Pms2 |
G |
A |
5: 143,867,945 (GRCm39) |
V850I |
probably benign |
Het |
| Psmd5 |
G |
T |
2: 34,747,794 (GRCm39) |
Q288K |
probably benign |
Het |
| Rab37 |
G |
A |
11: 115,051,475 (GRCm39) |
R194H |
probably damaging |
Het |
| Sds |
C |
T |
5: 120,621,677 (GRCm39) |
A273V |
probably damaging |
Het |
| Sema4f |
A |
G |
6: 82,890,480 (GRCm39) |
S776P |
probably benign |
Het |
| Sh3tc2 |
T |
C |
18: 62,101,101 (GRCm39) |
C65R |
probably benign |
Het |
| Siglece |
C |
T |
7: 43,307,162 (GRCm39) |
R275H |
possibly damaging |
Het |
| Slc6a12 |
G |
A |
6: 121,335,623 (GRCm39) |
A318T |
probably damaging |
Het |
| Smcr8 |
A |
T |
11: 60,670,705 (GRCm39) |
I618L |
probably benign |
Het |
| Stt3a |
A |
G |
9: 36,670,556 (GRCm39) |
F72L |
probably damaging |
Het |
| Tmem62 |
A |
G |
2: 120,835,224 (GRCm39) |
I516M |
probably benign |
Het |
| Tnpo2 |
C |
A |
8: 85,776,609 (GRCm39) |
H439N |
possibly damaging |
Het |
| Tut4 |
A |
T |
4: 108,370,083 (GRCm39) |
K661* |
probably null |
Het |
| Txlnb |
C |
T |
10: 17,718,570 (GRCm39) |
S467F |
probably damaging |
Het |
| Tyw5 |
G |
A |
1: 57,435,948 (GRCm39) |
P81S |
probably damaging |
Het |
| Vamp2 |
A |
G |
11: 68,980,585 (GRCm39) |
D51G |
possibly damaging |
Het |
| Vmn1r220 |
T |
A |
13: 23,368,609 (GRCm39) |
Y29F |
probably benign |
Het |
| Vmn2r80 |
A |
G |
10: 79,030,270 (GRCm39) |
T699A |
possibly damaging |
Het |
| Vps9d1 |
G |
A |
8: 123,977,674 (GRCm39) |
T87I |
probably benign |
Het |
| Zfhx3 |
T |
C |
8: 109,520,501 (GRCm39) |
V541A |
probably benign |
Het |
| Zmym4 |
A |
T |
4: 126,809,415 (GRCm39) |
L295Q |
probably damaging |
Het |
|
| Other mutations in Tecpr1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01399:Tecpr1
|
APN |
5 |
144,145,411 (GRCm39) |
critical splice donor site |
probably null |
|
|
IGL01774:Tecpr1
|
APN |
5 |
144,148,358 (GRCm39) |
missense |
probably damaging |
0.97 |
|
IGL01960:Tecpr1
|
APN |
5 |
144,153,737 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL01973:Tecpr1
|
APN |
5 |
144,134,806 (GRCm39) |
splice site |
probably benign |
|
|
IGL02244:Tecpr1
|
APN |
5 |
144,146,821 (GRCm39) |
missense |
probably benign |
|
|
IGL02247:Tecpr1
|
APN |
5 |
144,143,372 (GRCm39) |
missense |
possibly damaging |
0.64 |
|
IGL02423:Tecpr1
|
APN |
5 |
144,140,305 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
IGL02679:Tecpr1
|
APN |
5 |
144,143,364 (GRCm39) |
missense |
probably benign |
0.28 |
|
larghissimo
|
UTSW |
5 |
144,154,075 (GRCm39) |
missense |
probably damaging |
1.00 |
|
PIT4531001:Tecpr1
|
UTSW |
5 |
144,150,885 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R0121:Tecpr1
|
UTSW |
5 |
144,147,017 (GRCm39) |
missense |
probably benign |
0.02 |
|
R0125:Tecpr1
|
UTSW |
5 |
144,134,717 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0194:Tecpr1
|
UTSW |
5 |
144,155,335 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0376:Tecpr1
|
UTSW |
5 |
144,144,294 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R0441:Tecpr1
|
UTSW |
5 |
144,132,759 (GRCm39) |
missense |
probably benign |
|
|
R0504:Tecpr1
|
UTSW |
5 |
144,150,899 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0538:Tecpr1
|
UTSW |
5 |
144,143,092 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0586:Tecpr1
|
UTSW |
5 |
144,154,219 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0607:Tecpr1
|
UTSW |
5 |
144,149,408 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0608:Tecpr1
|
UTSW |
5 |
144,148,317 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0656:Tecpr1
|
UTSW |
5 |
144,150,871 (GRCm39) |
splice site |
probably null |
|
|
R0835:Tecpr1
|
UTSW |
5 |
144,149,410 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R1080:Tecpr1
|
UTSW |
5 |
144,153,747 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1394:Tecpr1
|
UTSW |
5 |
144,143,357 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
R1597:Tecpr1
|
UTSW |
5 |
144,151,128 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1663:Tecpr1
|
UTSW |
5 |
144,134,762 (GRCm39) |
missense |
probably benign |
0.17 |
|
R1785:Tecpr1
|
UTSW |
5 |
144,145,463 (GRCm39) |
missense |
probably benign |
0.01 |
|
R1786:Tecpr1
|
UTSW |
5 |
144,145,463 (GRCm39) |
missense |
probably benign |
0.01 |
|
R1833:Tecpr1
|
UTSW |
5 |
144,145,426 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1883:Tecpr1
|
UTSW |
5 |
144,143,347 (GRCm39) |
missense |
probably benign |
0.03 |
|
R1988:Tecpr1
|
UTSW |
5 |
144,141,515 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R2130:Tecpr1
|
UTSW |
5 |
144,145,463 (GRCm39) |
missense |
probably benign |
0.01 |
|
R2131:Tecpr1
|
UTSW |
5 |
144,145,463 (GRCm39) |
missense |
probably benign |
0.01 |
|
R2132:Tecpr1
|
UTSW |
5 |
144,145,463 (GRCm39) |
missense |
probably benign |
0.01 |
|
R2133:Tecpr1
|
UTSW |
5 |
144,145,463 (GRCm39) |
missense |
probably benign |
0.01 |
|
R2172:Tecpr1
|
UTSW |
5 |
144,148,274 (GRCm39) |
missense |
probably benign |
0.10 |
|
R2172:Tecpr1
|
UTSW |
5 |
144,133,235 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2290:Tecpr1
|
UTSW |
5 |
144,150,881 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R3691:Tecpr1
|
UTSW |
5 |
144,146,797 (GRCm39) |
missense |
probably benign |
0.10 |
|
R4027:Tecpr1
|
UTSW |
5 |
144,143,077 (GRCm39) |
missense |
probably benign |
0.41 |
|
R4587:Tecpr1
|
UTSW |
5 |
144,149,408 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R4684:Tecpr1
|
UTSW |
5 |
144,144,255 (GRCm39) |
missense |
probably benign |
0.16 |
|
R4864:Tecpr1
|
UTSW |
5 |
144,150,935 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4932:Tecpr1
|
UTSW |
5 |
144,141,476 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R4955:Tecpr1
|
UTSW |
5 |
144,154,075 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5043:Tecpr1
|
UTSW |
5 |
144,134,672 (GRCm39) |
splice site |
probably null |
|
|
R5459:Tecpr1
|
UTSW |
5 |
144,144,234 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5579:Tecpr1
|
UTSW |
5 |
144,151,162 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
R5677:Tecpr1
|
UTSW |
5 |
144,155,451 (GRCm39) |
nonsense |
probably null |
|
|
R5679:Tecpr1
|
UTSW |
5 |
144,144,241 (GRCm39) |
missense |
possibly damaging |
0.69 |
|
R5802:Tecpr1
|
UTSW |
5 |
144,143,364 (GRCm39) |
missense |
probably benign |
0.28 |
|
R6000:Tecpr1
|
UTSW |
5 |
144,148,239 (GRCm39) |
missense |
probably benign |
0.02 |
|
R6022:Tecpr1
|
UTSW |
5 |
144,136,009 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R6114:Tecpr1
|
UTSW |
5 |
144,141,458 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R6251:Tecpr1
|
UTSW |
5 |
144,135,394 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R6372:Tecpr1
|
UTSW |
5 |
144,153,776 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6493:Tecpr1
|
UTSW |
5 |
144,146,792 (GRCm39) |
missense |
probably benign |
|
|
R7276:Tecpr1
|
UTSW |
5 |
144,153,838 (GRCm39) |
nonsense |
probably null |
|
|
R7314:Tecpr1
|
UTSW |
5 |
144,154,150 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7375:Tecpr1
|
UTSW |
5 |
144,145,417 (GRCm39) |
missense |
possibly damaging |
0.68 |
|
R7632:Tecpr1
|
UTSW |
5 |
144,155,544 (GRCm39) |
missense |
probably benign |
0.03 |
|
R7702:Tecpr1
|
UTSW |
5 |
144,140,236 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8135:Tecpr1
|
UTSW |
5 |
144,135,420 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8406:Tecpr1
|
UTSW |
5 |
144,137,658 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8844:Tecpr1
|
UTSW |
5 |
144,153,117 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R8856:Tecpr1
|
UTSW |
5 |
144,153,117 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R8857:Tecpr1
|
UTSW |
5 |
144,153,117 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R8866:Tecpr1
|
UTSW |
5 |
144,153,117 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R8903:Tecpr1
|
UTSW |
5 |
144,150,845 (GRCm39) |
intron |
probably benign |
|
|
R8926:Tecpr1
|
UTSW |
5 |
144,153,780 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9423:Tecpr1
|
UTSW |
5 |
144,155,396 (GRCm39) |
missense |
probably damaging |
0.98 |
|
RF001:Tecpr1
|
UTSW |
5 |
144,154,204 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Z1176:Tecpr1
|
UTSW |
5 |
144,155,409 (GRCm39) |
missense |
probably benign |
0.28 |
|
| Predicted Primers |
PCR Primer
(F):5'- AAGGTGGGAGCATCATTTGTC -3'
(R):5'- ATCTGGCTCACTCCTAACGC -3'
Sequencing Primer
(F):5'- AGCATCATTTGTCTTGGTGGAAAG -3'
(R):5'- TCAGCGTTGGAACCCCATG -3'
|
| Posted On |
2022-02-07 |
Incidental Mutation