Mutagenetix > Incidental Mutation

Incidental Mutation 'R9222:Dpep2'

699544

Institutional Source

Beutler Lab

Gene Symbol

Dpep2

Ensembl Gene

ENSMUSG00000115067

Gene Name

dipeptidase 2

Synonyms

F630103D06Rik, MBD-2

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.144) question?

Stock #

R9222 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

106711577-106732658 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 106723016 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Leucine at position 13 (H13L)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000034373] [ENSMUST00000117555] [ENSMUST00000142898] [ENSMUST00000227363] [ENSMUST00000227778]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000034373

SMART Domains

Protein: ENSMUSP00000034373
Gene: ENSMUSG00000053687

Domain	Start	End	E-Value	Type
signal peptide	1	31	N/A	INTRINSIC
Pfam:Peptidase_M19	80	401	3.4e-112	PFAM

Predicted Effect

SMART Domains

Protein: ENSMUSP00000080659
Gene: ENSMUSG00000115067
AA Change: H13L

Domain	Start	End	E-Value	Type
low complexity region	97	113	N/A	INTRINSIC
Pfam:Peptidase_M19	166	501	1.2e-104	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000117555

SMART Domains

Protein: ENSMUSP00000113877
Gene: ENSMUSG00000053687

Domain	Start	End	E-Value	Type
Pfam:Peptidase_M19	1	308	5.7e-107	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000142898

Predicted Effect

possibly damaging
Transcript: ENSMUST00000227363
AA Change: H4L

PolyPhen 2 Score 0.548 (Sensitivity: 0.88; Specificity: 0.91)

Predicted Effect

possibly damaging
Transcript: ENSMUST00000227778
AA Change: H51L

PolyPhen 2 Score 0.663 (Sensitivity: 0.86; Specificity: 0.91)

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.6%

Validation Efficiency

100% (62/62)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] DPEP2 belongs to the membrane-bound dipeptidase (EC 3.4.13.19) family. These enzymes hydrolyze a variety of dipeptides, including leukotriene D4, the beta-lactam ring of some antibiotics, and cystinyl-bis-glycine (cys-bis-gly) formed during glutathione degradation (Habib et al., 2003 [PubMed 12738806]).[supplied by OMIM, Mar 2008]

Allele List at MGI

Other mutations in this stock

Total: 63 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700123K08Rik	C	A	5: 138,560,562 (GRCm39)	V278F	unknown	Het
Acte1	G	T	7: 143,434,902 (GRCm39)		probably null	Het
Actr5	T	A	2: 158,473,423 (GRCm39)	N272K	probably damaging	Het
Afg3l2	T	C	18: 67,567,257 (GRCm39)	T198A	probably benign	Het
Aloxe3	A	G	11: 69,023,903 (GRCm39)	Y278C	probably damaging	Het
Apobec3	A	G	15: 79,783,270 (GRCm39)	I226V		Het
Arap2	T	A	5: 62,828,421 (GRCm39)	T917S	possibly damaging	Het
Arhgap40	T	C	2: 158,388,692 (GRCm39)	L545P	probably damaging	Het
Atp13a5	A	T	16: 29,133,472 (GRCm39)	L438H	probably damaging	Het
Ccdc191	T	A	16: 43,725,831 (GRCm39)	Y105N	probably damaging	Het
Ccdc7a	A	T	8: 129,525,610 (GRCm39)	F1406L	unknown	Het
Celsr1	A	G	15: 85,815,471 (GRCm39)	V1848A	possibly damaging	Het
Chn1	T	A	2: 73,443,499 (GRCm39)	N417I	probably damaging	Het
Cmya5	T	C	13: 93,230,579 (GRCm39)	K1503R	probably benign	Het
Cryz	T	C	3: 154,317,203 (GRCm39)	F141L	probably benign	Het
Dmac2l	T	C	12: 69,788,554 (GRCm39)	V151A	probably damaging	Het
Eif2b5	C	T	16: 20,321,382 (GRCm39)	R312*	probably null	Het
Evc	A	T	5: 37,477,650 (GRCm39)	M343K	probably benign	Het
Fbxw17	T	A	13: 50,577,367 (GRCm39)	D86E	probably damaging	Het
Fbxw9	T	A	8: 85,788,856 (GRCm39)	L202Q	probably damaging	Het
Fkbp9	G	T	6: 56,852,677 (GRCm39)	V466F	probably damaging	Het
Fras1	G	A	5: 96,805,087 (GRCm39)	R1243Q	probably benign	Het
Fsip2	C	T	2: 82,815,958 (GRCm39)	T3897I	probably benign	Het
Fut7	T	C	2: 25,315,191 (GRCm39)	S150P	possibly damaging	Het
Gstm5	A	G	3: 107,804,634 (GRCm39)	I73V	probably benign	Het
Hspb9	A	G	11: 100,604,769 (GRCm39)	M32V	possibly damaging	Het
Ift80	A	G	3: 68,825,894 (GRCm39)	I482T	possibly damaging	Het
Khk	C	T	5: 31,079,141 (GRCm39)		probably benign	Het
Kmt2d	A	T	15: 98,747,324 (GRCm39)	H3333Q	unknown	Het
Lamc1	G	T	1: 153,119,087 (GRCm39)	T844K	probably damaging	Het
Luc7l2	A	T	6: 38,542,633 (GRCm39)	I10L	probably benign	Het
Mosmo	T	A	7: 120,277,055 (GRCm39)	I23N	probably benign	Het
Mtcl2	A	G	2: 156,881,919 (GRCm39)	V711A	probably benign	Het
Nbea	AC	A	3: 55,998,393 (GRCm39)		probably null	Het
Nfkbiz	A	T	16: 55,634,347 (GRCm39)	V700E	probably damaging	Het
Nsun7	T	C	5: 66,418,366 (GRCm39)	V32A	probably benign	Het
Oog1	A	G	12: 87,653,016 (GRCm39)	D104G	probably damaging	Het
Or4b13	C	T	2: 90,082,820 (GRCm39)	V171M	possibly damaging	Het
Pde3a	A	G	6: 141,437,904 (GRCm39)	D991G	probably damaging	Het
Pds5a	G	A	5: 65,805,281 (GRCm39)	H522Y	probably benign	Het
Pi4ka	A	G	16: 17,176,225 (GRCm39)	S405P		Het
Plk4	T	A	3: 40,760,990 (GRCm39)	V440E	possibly damaging	Het
Prkd2	A	G	7: 16,577,699 (GRCm39)	I51V	probably damaging	Het
Ptprt	T	C	2: 161,402,106 (GRCm39)	T1042A	probably damaging	Het
Rsph6a	C	A	7: 18,801,986 (GRCm39)	T600N	possibly damaging	Het
Scn11a	A	T	9: 119,611,013 (GRCm39)	V946E	probably damaging	Het
Sec11a	G	A	7: 80,565,634 (GRCm39)	L170F	probably damaging	Het
Slc15a5	A	G	6: 137,961,450 (GRCm39)	I215T		Het
Slc1a1	A	G	19: 28,882,794 (GRCm39)	I353V	probably benign	Het
Smox	A	G	2: 131,362,843 (GRCm39)	E374G	possibly damaging	Het
Sytl2	A	G	7: 90,050,633 (GRCm39)	T727A	possibly damaging	Het
Taar7d	A	C	10: 23,904,124 (GRCm39)	K335N	probably benign	Het
Tacc2	T	A	7: 130,227,985 (GRCm39)	S1557T	probably benign	Het
Tbx19	C	A	1: 164,966,609 (GRCm39)	V422L	probably benign	Het
Tdrd1	G	T	19: 56,831,679 (GRCm39)	V357F	probably benign	Het
Tdrd6	A	G	17: 43,939,231 (GRCm39)	C606R	probably damaging	Het
Tmcc1	C	G	6: 116,020,049 (GRCm39)	G468R		Het
Tmem209	G	A	6: 30,506,838 (GRCm39)	T93I	probably damaging	Het
Trpv1	T	C	11: 73,141,681 (GRCm39)	V568A	possibly damaging	Het
Tsbp1	A	T	17: 34,648,922 (GRCm39)	I43L		Het
Tubgcp2	T	C	7: 139,587,965 (GRCm39)	D220G	probably damaging	Het
Vmn1r11	A	G	6: 57,114,992 (GRCm39)	R219G	possibly damaging	Het
Zan	A	G	5: 137,465,463 (GRCm39)	S431P	possibly damaging	Het

Other mutations in Dpep2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00590:Dpep2	APN	8	106,715,453 (GRCm39)	missense	probably damaging	1.00
IGL01160:Dpep2	APN	8	106,713,076 (GRCm39)	missense	possibly damaging	0.95
IGL02071:Dpep2	APN	8	106,711,776 (GRCm39)	missense	probably benign	0.01
IGL02441:Dpep2	APN	8	106,711,723 (GRCm39)	missense	probably benign	0.00
IGL02517:Dpep2	APN	8	106,715,388 (GRCm39)	missense	probably damaging	1.00
IGL02836:Dpep2	APN	8	106,717,227 (GRCm39)	critical splice donor site	probably null
G1citation:Dpep2	UTSW	8	106,711,873 (GRCm39)	missense	probably benign	0.01
R0504:Dpep2	UTSW	8	106,716,620 (GRCm39)	missense	probably benign	0.29
R1866:Dpep2	UTSW	8	106,716,080 (GRCm39)	critical splice donor site	probably null
R1982:Dpep2	UTSW	8	106,716,087 (GRCm39)	nonsense	probably null
R2172:Dpep2	UTSW	8	106,715,630 (GRCm39)	missense	possibly damaging	0.88
R2399:Dpep2	UTSW	8	106,716,224 (GRCm39)	missense	probably damaging	1.00
R4369:Dpep2	UTSW	8	106,711,707 (GRCm39)	missense	probably benign	0.00
R4499:Dpep2	UTSW	8	106,712,114 (GRCm39)	missense	probably benign	0.32
R4500:Dpep2	UTSW	8	106,712,114 (GRCm39)	missense	probably benign	0.32
R4774:Dpep2	UTSW	8	106,717,388 (GRCm39)	missense	possibly damaging	0.48
R5114:Dpep2	UTSW	8	106,712,825 (GRCm39)	missense	probably damaging	1.00
R5727:Dpep2	UTSW	8	106,713,075 (GRCm39)	missense	probably benign	0.00
R6052:Dpep2	UTSW	8	106,717,270 (GRCm39)	missense	possibly damaging	0.91
R6177:Dpep2	UTSW	8	106,712,831 (GRCm39)	missense	probably damaging	1.00
R6658:Dpep2	UTSW	8	106,716,542 (GRCm39)	missense	probably benign	0.01
R6822:Dpep2	UTSW	8	106,711,873 (GRCm39)	missense	probably benign	0.01
R7854:Dpep2	UTSW	8	106,716,160 (GRCm39)	missense
R7866:Dpep2	UTSW	8	106,716,113 (GRCm39)	missense
R8169:Dpep2	UTSW	8	106,722,849 (GRCm39)	missense
R9047:Dpep2	UTSW	8	106,715,944 (GRCm39)	missense
R9203:Dpep2	UTSW	8	106,712,885 (GRCm39)	missense	probably damaging	1.00
V7732:Dpep2	UTSW	8	106,715,892 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GCAGCATCTAATGTGGGGCTAC -3'
(R):5'- TGGGCCCTAGTCAGAAACAG -3'

Sequencing Primer
(F):5'- TGCTTCAATTTCAGGCGAGGAAC -3'
(R):5'- CCCTAGTCAGAAACAGGAAGG -3'

Posted On

2022-02-07