Incidental Mutation 'R8939:Magi3'
ID 700875
Institutional Source Beutler Lab
Gene Symbol Magi3
Ensembl Gene ENSMUSG00000052539
Gene Name membrane associated guanylate kinase, WW and PDZ domain containing 3
Synonyms 4732496O19Rik, 6530407C02Rik
MMRRC Submission 068712-MU
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.435) question?
Stock # R8939 (G1)
Quality Score 225.009
Status Validated
Chromosome 3
Chromosomal Location 103920575-104127690 bp(-) (GRCm39)
Type of Mutation intron
DNA Base Change (assembly) T to C at 103996748 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000113713 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000064371] [ENSMUST00000121198] [ENSMUST00000122303]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000064371
SMART Domains Protein: ENSMUSP00000067932
Gene: ENSMUSG00000052539

DomainStartEndE-ValueType
low complexity region 2 14 N/A INTRINSIC
PDZ 27 108 1.94e-1 SMART
GuKc 114 281 8.56e-10 SMART
WW 297 329 9.14e-12 SMART
WW 343 375 2.47e-8 SMART
PDZ 421 497 1.48e-17 SMART
PDZ 589 659 3.07e-10 SMART
low complexity region 664 674 N/A INTRINSIC
low complexity region 683 698 N/A INTRINSIC
PDZ 737 813 1.34e-15 SMART
PDZ 861 939 7.65e-20 SMART
PDZ 1030 1104 1.55e-20 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000121198
SMART Domains Protein: ENSMUSP00000112934
Gene: ENSMUSG00000052539

DomainStartEndE-ValueType
low complexity region 2 14 N/A INTRINSIC
PDZ 27 108 1.94e-1 SMART
GuKc 114 281 8.56e-10 SMART
WW 297 329 9.14e-12 SMART
WW 343 375 2.47e-8 SMART
PDZ 421 497 1.48e-17 SMART
PDZ 589 659 3.07e-10 SMART
low complexity region 664 674 N/A INTRINSIC
low complexity region 683 698 N/A INTRINSIC
PDZ 737 813 1.34e-15 SMART
PDZ 861 939 7.65e-20 SMART
PDZ 1030 1104 1.55e-20 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000122303
SMART Domains Protein: ENSMUSP00000113713
Gene: ENSMUSG00000052539

DomainStartEndE-ValueType
low complexity region 2 14 N/A INTRINSIC
PDZ 27 108 1.94e-1 SMART
GuKc 114 281 8.56e-10 SMART
WW 297 329 9.14e-12 SMART
WW 343 375 2.47e-8 SMART
PDZ 421 497 1.48e-17 SMART
PDZ 589 659 3.07e-10 SMART
low complexity region 664 674 N/A INTRINSIC
low complexity region 683 698 N/A INTRINSIC
PDZ 737 813 1.34e-15 SMART
PDZ 861 939 7.65e-20 SMART
PDZ 1030 1104 1.55e-20 SMART
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 98.9%
Validation Efficiency 100% (71/71)
Allele List at MGI
Other mutations in this stock
Total: 72 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930578I06Rik A G 14: 64,225,162 (GRCm39) V12A probably benign Het
Abcc12 A G 8: 87,243,947 (GRCm39) Y1069H probably damaging Het
Abcc9 T C 6: 142,624,977 (GRCm39) T473A probably damaging Het
Acsm1 A T 7: 119,239,868 (GRCm39) T271S probably benign Het
Adh6b T C 3: 138,055,397 (GRCm39) I49T probably benign Het
Aff4 A T 11: 53,263,231 (GRCm39) T84S probably benign Het
Angptl7 G A 4: 148,580,956 (GRCm39) R280* probably null Het
Bhlhe23 T A 2: 180,418,099 (GRCm39) K146N probably damaging Het
Cacna1s T C 1: 136,014,544 (GRCm39) probably null Het
Cfap45 C G 1: 172,372,834 (GRCm39) R510G probably damaging Het
Chl1 A G 6: 103,642,868 (GRCm39) Y202C probably damaging Het
Chrna6 T A 8: 27,896,870 (GRCm39) T336S probably benign Het
Clpx A G 9: 65,231,519 (GRCm39) K535E probably benign Het
Crybg3 T C 16: 59,376,512 (GRCm39) M1581V probably benign Het
Ddx4 A T 13: 112,758,823 (GRCm39) I246K probably benign Het
F7 G T 8: 13,078,724 (GRCm39) G52C probably damaging Het
Fam186b T C 15: 99,177,223 (GRCm39) Q701R probably benign Het
Fign T A 2: 63,809,456 (GRCm39) M605L probably benign Het
Fpr2 T C 17: 18,113,883 (GRCm39) F293S probably damaging Het
Gm40460 GCAGCAGCTGGACTGGCAGCAGCAGGGCTTACAGCAGCTGGACTGGCAGCAGCAGGGCTTACAGCAGCTGGACTGGCAGCAGCAGGGCTTACAGCAGCTGGACTGGCAGCAG GCAGCAGCTGGACTGGCAGCAGCAGGGCTTACAGCAGCTGGACTGGCAGCAGCAGGGCTTACAGCAGCTGGACTGGCAGCAG 7: 141,794,171 (GRCm39) probably benign Het
Gria2 A T 3: 80,618,170 (GRCm39) probably benign Het
Grid1 G A 14: 35,043,664 (GRCm39) D340N probably damaging Het
Gsto2 T C 19: 47,873,203 (GRCm39) probably null Het
Hsd3b1 A G 3: 98,760,299 (GRCm39) W231R probably damaging Het
Igflr1 CAGAG CAG 7: 30,266,888 (GRCm39) probably null Het
Ighv1-80 C T 12: 115,876,113 (GRCm39) G68R probably damaging Het
Il10ra A G 9: 45,177,802 (GRCm39) V69A unknown Het
Klhdc1 C T 12: 69,300,537 (GRCm39) A159V probably damaging Het
Krtap4-6 A G 11: 99,556,229 (GRCm39) I166T unknown Het
Lce1h A T 3: 92,670,976 (GRCm39) C59S unknown Het
Map3k1 G T 13: 111,892,837 (GRCm39) S806* probably null Het
Map3k6 T A 4: 132,979,954 (GRCm39) probably benign Het
Mgam G A 6: 40,740,137 (GRCm39) probably null Het
Mtx1 A G 3: 89,120,033 (GRCm39) V207A probably damaging Het
Muc5ac A T 7: 141,347,091 (GRCm39) N356Y probably damaging Het
Myo16 T C 8: 10,524,679 (GRCm39) F810S probably damaging Het
Nlrx1 A G 9: 44,166,761 (GRCm39) L774P probably damaging Het
Nr1i2 C T 16: 38,086,382 (GRCm39) V28I probably benign Het
Or10h28 A G 17: 33,488,589 (GRCm39) K297R probably damaging Het
Or5b122 A C 19: 13,562,860 (GRCm39) N64T probably damaging Het
Pcmtd2 T C 2: 181,496,863 (GRCm39) probably benign Het
Pcnx3 A G 19: 5,730,347 (GRCm39) L102P probably damaging Het
Pnpla6 A G 8: 3,571,319 (GRCm39) E114G possibly damaging Het
Ppp4r1 T C 17: 66,110,926 (GRCm39) V70A probably damaging Het
Psd2 G A 18: 36,121,292 (GRCm39) V421M probably damaging Het
Qng1 C T 13: 58,532,875 (GRCm39) A32T probably damaging Het
Rbak C T 5: 143,160,025 (GRCm39) E343K possibly damaging Het
Rhbdf1 G A 11: 32,160,093 (GRCm39) A136V probably benign Het
Rusc1 T A 3: 88,995,337 (GRCm39) E231D probably benign Het
Rxfp1 T C 3: 79,552,231 (GRCm39) E690G probably damaging Het
Sdr9c7 A G 10: 127,734,776 (GRCm39) E88G probably benign Het
Sec23b T C 2: 144,411,137 (GRCm39) probably null Het
Sgcb A T 5: 73,801,661 (GRCm39) I68N probably damaging Het
Sh3pxd2b T C 11: 32,364,433 (GRCm39) probably benign Het
Slc25a48 C T 13: 56,611,519 (GRCm39) P209S probably damaging Het
Slc9a3 C A 13: 74,311,895 (GRCm39) H614Q possibly damaging Het
Slurp1 G A 15: 74,598,763 (GRCm39) S76L probably damaging Het
Spen T C 4: 141,202,969 (GRCm39) E1886G possibly damaging Het
Sqor C T 2: 122,649,549 (GRCm39) P151S possibly damaging Het
Sstr4 C A 2: 148,238,228 (GRCm39) L280M probably damaging Het
Stard10 A G 7: 100,991,847 (GRCm39) Y117C probably damaging Het
Stard13 A T 5: 150,968,574 (GRCm39) probably null Het
Stim2 G T 5: 54,262,673 (GRCm39) R305L possibly damaging Het
Syt14 G A 1: 192,612,896 (GRCm39) R635C probably damaging Het
Tmcc3 A T 10: 94,381,483 (GRCm39) probably benign Het
Ttn T C 2: 76,575,695 (GRCm39) N23320S possibly damaging Het
Ubqln4 A G 3: 88,473,023 (GRCm39) T493A probably benign Het
Ugt2b34 A G 5: 87,039,158 (GRCm39) L501P probably damaging Het
Umod T C 7: 119,068,700 (GRCm39) I449V probably damaging Het
Vmn2r51 C A 7: 9,833,953 (GRCm39) D362Y possibly damaging Het
Xirp2 A C 2: 67,346,488 (GRCm39) T2910P probably benign Het
Zscan20 A G 4: 128,498,315 (GRCm39) S28P probably benign Het
Other mutations in Magi3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00429:Magi3 APN 3 103,922,294 (GRCm39) missense probably damaging 1.00
IGL00933:Magi3 APN 3 103,923,163 (GRCm39) missense probably benign
IGL01151:Magi3 APN 3 103,958,690 (GRCm39) missense probably damaging 1.00
IGL01674:Magi3 APN 3 104,013,037 (GRCm39) splice site probably benign
IGL01790:Magi3 APN 3 103,992,560 (GRCm39) missense probably damaging 1.00
IGL01903:Magi3 APN 3 103,958,526 (GRCm39) missense possibly damaging 0.87
IGL01939:Magi3 APN 3 103,961,778 (GRCm39) missense probably damaging 0.99
IGL02142:Magi3 APN 3 103,923,219 (GRCm39) missense probably benign 0.32
IGL02183:Magi3 APN 3 103,992,663 (GRCm39) missense probably benign 0.01
IGL02887:Magi3 APN 3 104,002,473 (GRCm39) missense probably damaging 1.00
IGL03071:Magi3 APN 3 103,923,202 (GRCm39) missense possibly damaging 0.51
IGL03085:Magi3 APN 3 103,922,655 (GRCm39) missense possibly damaging 0.88
IGL03192:Magi3 APN 3 103,950,562 (GRCm39) missense probably damaging 1.00
IGL03204:Magi3 APN 3 104,013,151 (GRCm39) missense probably damaging 1.00
IGL03227:Magi3 APN 3 103,958,435 (GRCm39) missense probably benign
IGL03388:Magi3 APN 3 103,923,157 (GRCm39) missense probably benign 0.30
PIT4280001:Magi3 UTSW 3 103,961,668 (GRCm39) missense probably damaging 1.00
PIT4504001:Magi3 UTSW 3 103,922,842 (GRCm39) missense probably benign 0.05
R0092:Magi3 UTSW 3 103,958,280 (GRCm39) nonsense probably null
R0514:Magi3 UTSW 3 103,922,338 (GRCm39) missense probably damaging 1.00
R0569:Magi3 UTSW 3 103,923,358 (GRCm39) missense probably benign 0.43
R0608:Magi3 UTSW 3 103,924,873 (GRCm39) missense probably damaging 1.00
R0920:Magi3 UTSW 3 103,941,507 (GRCm39) splice site probably null
R1173:Magi3 UTSW 3 103,968,946 (GRCm39) critical splice donor site probably null
R1256:Magi3 UTSW 3 103,935,126 (GRCm39) missense probably benign 0.08
R1391:Magi3 UTSW 3 103,922,374 (GRCm39) nonsense probably null
R1559:Magi3 UTSW 3 103,954,169 (GRCm39) splice site probably benign
R1568:Magi3 UTSW 3 103,996,843 (GRCm39) missense probably benign 0.02
R1631:Magi3 UTSW 3 103,958,493 (GRCm39) missense probably benign 0.05
R1747:Magi3 UTSW 3 103,941,489 (GRCm39) missense possibly damaging 0.82
R1930:Magi3 UTSW 3 103,996,920 (GRCm39) missense probably damaging 1.00
R1964:Magi3 UTSW 3 103,927,718 (GRCm39) missense probably damaging 0.99
R2151:Magi3 UTSW 3 103,992,554 (GRCm39) missense probably damaging 1.00
R2151:Magi3 UTSW 3 103,954,198 (GRCm39) missense probably damaging 1.00
R2266:Magi3 UTSW 3 103,928,382 (GRCm39) intron probably benign
R2267:Magi3 UTSW 3 103,928,382 (GRCm39) intron probably benign
R2268:Magi3 UTSW 3 103,928,382 (GRCm39) intron probably benign
R2519:Magi3 UTSW 3 103,923,081 (GRCm39) missense probably benign 0.00
R3104:Magi3 UTSW 3 103,958,636 (GRCm39) missense probably damaging 0.99
R3105:Magi3 UTSW 3 103,958,636 (GRCm39) missense probably damaging 0.99
R3619:Magi3 UTSW 3 103,961,721 (GRCm39) missense probably damaging 1.00
R4158:Magi3 UTSW 3 103,958,277 (GRCm39) missense probably damaging 1.00
R4160:Magi3 UTSW 3 103,958,277 (GRCm39) missense probably damaging 1.00
R4284:Magi3 UTSW 3 103,923,184 (GRCm39) nonsense probably null
R4285:Magi3 UTSW 3 103,923,184 (GRCm39) nonsense probably null
R4397:Magi3 UTSW 3 104,127,030 (GRCm39) missense probably damaging 1.00
R4512:Magi3 UTSW 3 103,996,871 (GRCm39) missense probably damaging 0.99
R4676:Magi3 UTSW 3 103,923,141 (GRCm39) missense probably benign
R4758:Magi3 UTSW 3 103,922,637 (GRCm39) missense probably benign 0.01
R4940:Magi3 UTSW 3 103,958,708 (GRCm39) missense probably damaging 1.00
R5039:Magi3 UTSW 3 104,013,107 (GRCm39) missense probably damaging 1.00
R5160:Magi3 UTSW 3 103,935,224 (GRCm39) missense possibly damaging 0.46
R5422:Magi3 UTSW 3 103,958,684 (GRCm39) missense probably damaging 1.00
R5509:Magi3 UTSW 3 103,922,818 (GRCm39) missense probably benign 0.00
R5839:Magi3 UTSW 3 104,127,047 (GRCm39) missense probably damaging 1.00
R5924:Magi3 UTSW 3 103,961,854 (GRCm39) splice site probably null
R6018:Magi3 UTSW 3 104,013,128 (GRCm39) missense probably damaging 1.00
R6189:Magi3 UTSW 3 103,958,181 (GRCm39) missense probably damaging 1.00
R6235:Magi3 UTSW 3 103,923,384 (GRCm39) missense probably damaging 0.99
R6244:Magi3 UTSW 3 103,923,013 (GRCm39) missense probably benign 0.16
R6258:Magi3 UTSW 3 103,996,912 (GRCm39) missense probably damaging 1.00
R6358:Magi3 UTSW 3 103,958,268 (GRCm39) missense probably damaging 1.00
R6534:Magi3 UTSW 3 103,992,536 (GRCm39) missense possibly damaging 0.75
R6806:Magi3 UTSW 3 103,954,285 (GRCm39) missense possibly damaging 0.94
R6816:Magi3 UTSW 3 103,997,227 (GRCm39) splice site probably null
R6897:Magi3 UTSW 3 103,996,873 (GRCm39) missense probably damaging 1.00
R7011:Magi3 UTSW 3 104,013,070 (GRCm39) missense probably damaging 1.00
R7039:Magi3 UTSW 3 103,958,699 (GRCm39) missense probably damaging 1.00
R7196:Magi3 UTSW 3 103,956,484 (GRCm39) missense probably benign 0.01
R7237:Magi3 UTSW 3 103,935,227 (GRCm39) missense probably damaging 1.00
R7285:Magi3 UTSW 3 103,941,430 (GRCm39) missense probably benign 0.00
R7709:Magi3 UTSW 3 103,941,354 (GRCm39) missense probably damaging 1.00
R7724:Magi3 UTSW 3 103,923,243 (GRCm39) missense probably benign 0.04
R7797:Magi3 UTSW 3 103,958,618 (GRCm39) missense probably damaging 1.00
R7950:Magi3 UTSW 3 103,924,005 (GRCm39) missense probably damaging 1.00
R8140:Magi3 UTSW 3 103,941,402 (GRCm39) missense probably damaging 1.00
R8204:Magi3 UTSW 3 103,958,502 (GRCm39) missense probably benign
R8229:Magi3 UTSW 3 103,923,018 (GRCm39) missense probably benign 0.00
R8229:Magi3 UTSW 3 103,923,017 (GRCm39) missense possibly damaging 0.79
R8260:Magi3 UTSW 3 103,922,625 (GRCm39) missense probably benign 0.01
R8348:Magi3 UTSW 3 103,958,531 (GRCm39) missense probably damaging 1.00
R8368:Magi3 UTSW 3 104,002,379 (GRCm39) critical splice donor site probably null
R8543:Magi3 UTSW 3 104,126,984 (GRCm39) missense probably damaging 0.98
R8762:Magi3 UTSW 3 103,958,169 (GRCm39) missense probably damaging 1.00
R8826:Magi3 UTSW 3 103,992,662 (GRCm39) missense probably benign 0.00
R8847:Magi3 UTSW 3 103,922,334 (GRCm39) missense probably benign 0.09
R8892:Magi3 UTSW 3 103,958,141 (GRCm39) missense probably damaging 1.00
R9090:Magi3 UTSW 3 103,923,264 (GRCm39) missense possibly damaging 0.68
R9187:Magi3 UTSW 3 103,923,073 (GRCm39) missense possibly damaging 0.76
R9271:Magi3 UTSW 3 103,923,264 (GRCm39) missense possibly damaging 0.68
R9433:Magi3 UTSW 3 103,922,473 (GRCm39) missense probably benign 0.01
R9439:Magi3 UTSW 3 103,922,473 (GRCm39) missense probably benign 0.01
R9557:Magi3 UTSW 3 103,924,933 (GRCm39) missense probably damaging 1.00
R9557:Magi3 UTSW 3 103,922,473 (GRCm39) missense probably benign 0.01
R9697:Magi3 UTSW 3 103,956,458 (GRCm39) critical splice donor site probably null
R9796:Magi3 UTSW 3 103,928,291 (GRCm39) missense probably benign
X0026:Magi3 UTSW 3 103,927,736 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- GCCAGAAAGATTCCCGTATCC -3'
(R):5'- CAGGTCCTCTTTGACAATGAGTTTG -3'

Sequencing Primer
(F):5'- TCAGATAAGGTGATGCCACATC -3'
(R):5'- CCTCTTTGACAATGAGTTTGACACAG -3'
Posted On 2022-02-21