Mutagenetix > Incidental Mutation

Incidental Mutation 'R9255:Styk1'

701801

Institutional Source

Beutler Lab

Gene Symbol

Styk1

Ensembl Gene

ENSMUSG00000032899

Gene Name

serine/threonine/tyrosine kinase 1

Synonyms

MMRRC Submission

068961-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.311) question?

Stock #

R9255 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

131276096-131330532 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 131286946 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 183 (V183A)

Ref Sequence

ENSEMBL: ENSMUSP00000044098 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000049150] [ENSMUST00000121078]

AlphaFold

Q6J9G1

Predicted Effect

probably damaging
Transcript: ENSMUST00000049150
AA Change: V183A

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000044098
Gene: ENSMUSG00000032899
AA Change: V183A

Domain	Start	End	E-Value	Type
transmembrane domain	31	53	N/A	INTRINSIC
Pfam:Pkinase	119	387	3.2e-31	PFAM
Pfam:Pkinase_Tyr	119	387	1.8e-59	PFAM
low complexity region	399	410	N/A	INTRINSIC

Predicted Effect

possibly damaging
Transcript: ENSMUST00000121078
AA Change: V94A

PolyPhen 2 Score 0.455 (Sensitivity: 0.89; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000112900
Gene: ENSMUSG00000032899
AA Change: V94A

Domain	Start	End	E-Value	Type
transmembrane domain	31	53	N/A	INTRINSIC
Pfam:Pkinase_Tyr	67	298	2.5e-53	PFAM
Pfam:Pkinase	68	298	5.7e-29	PFAM
low complexity region	310	321	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.2%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Receptor protein tyrosine kinases, like STYK1, play important roles in diverse cellular and developmental processes, such as cell proliferation, differentiation, and survival (Liu et al., 2004 [PubMed 15150103]).[supplied by OMIM, Mar 2008]

Allele List at MGI

Other mutations in this stock

Total: 71 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
A2m	A	G	6: 121,626,795 (GRCm39)	Y549C	probably damaging	Het
Abca13	A	C	11: 9,278,213 (GRCm39)	N3131T	probably damaging	Het
Acap3	T	C	4: 155,990,145 (GRCm39)	V775A	probably benign	Het
Actn3	T	A	19: 4,921,820 (GRCm39)	I149F	probably damaging	Het
Adcy2	A	T	13: 69,036,199 (GRCm39)	M154K	possibly damaging	Het
Agbl1	A	T	7: 76,416,150 (GRCm39)	M976L	unknown	Het
Agbl3	T	A	6: 34,789,840 (GRCm39)	M531K	probably damaging	Het
Armc8	A	C	9: 99,379,441 (GRCm39)	M495R	possibly damaging	Het
Astn2	T	A	4: 65,563,085 (GRCm39)	K899*	probably null	Het
Atp10b	T	A	11: 43,107,148 (GRCm39)	H727Q	probably damaging	Het
Bach1	A	G	16: 87,519,401 (GRCm39)	I564V	possibly damaging	Het
Bean1	CT	C	8: 104,908,664 (GRCm39)		probably null	Het
Ccdc136	T	A	6: 29,409,237 (GRCm39)	H183Q	probably benign	Het
Celf3	T	C	3: 94,392,594 (GRCm39)	F98L	probably benign	Het
Chrd	G	A	16: 20,558,801 (GRCm39)	C845Y	probably damaging	Het
Clec1a	T	G	6: 129,409,208 (GRCm39)	K139N	probably benign	Het
Cntln	T	G	4: 85,019,103 (GRCm39)	N130K	possibly damaging	Het
Cog1	A	T	11: 113,547,019 (GRCm39)	T538S	probably benign	Het
Cog8	A	G	8: 107,779,383 (GRCm39)	I298T	probably damaging	Het
Dio1	A	T	4: 107,164,102 (GRCm39)	W72R	probably damaging	Het
Elapor1	T	C	3: 108,376,864 (GRCm39)	R453G	probably damaging	Het
Exph5	T	A	9: 53,284,609 (GRCm39)	N563K	possibly damaging	Het
Foxn1	C	A	11: 78,252,399 (GRCm39)	E330*	probably null	Het
Fzd7	G	T	1: 59,522,495 (GRCm39)	R126L	possibly damaging	Het
Gmnn	A	G	13: 24,937,351 (GRCm39)	Y147H	probably benign	Het
Gpa33	A	G	1: 165,980,186 (GRCm39)	N83S	probably benign	Het
Hdac4	A	G	1: 91,889,173 (GRCm39)		probably null	Het
Hydin	A	G	8: 111,261,972 (GRCm39)	D2691G	probably benign	Het
Ifi203	A	T	1: 173,756,787 (GRCm39)	I332N	unknown	Het
Inpp1	A	G	1: 52,829,306 (GRCm39)	S238P	probably benign	Het
Jmy	A	G	13: 93,589,894 (GRCm39)		probably null	Het
Kcnab3	C	T	11: 69,222,337 (GRCm39)	Q327*	probably null	Het
Kctd1	A	G	18: 15,194,853 (GRCm39)	V590A	probably benign	Het
Lrrc8e	A	T	8: 4,284,504 (GRCm39)	H243L	probably damaging	Het
Lsr	A	G	7: 30,657,670 (GRCm39)	L498S	probably benign	Het
Mapkbp1	A	G	2: 119,843,556 (GRCm39)	D268G	probably damaging	Het
Mfn1	T	C	3: 32,598,287 (GRCm39)	V203A	possibly damaging	Het
Micu1	T	A	10: 59,604,051 (GRCm39)	I212N	probably damaging	Het
Nicn1	C	T	9: 108,171,708 (GRCm39)	R163C	possibly damaging	Het
Nos1	G	C	5: 118,017,402 (GRCm39)	R255P	probably benign	Het
Or11i1	A	G	3: 106,729,737 (GRCm39)	I46T	probably benign	Het
Or12j4	T	C	7: 140,046,423 (GRCm39)	F103S	probably damaging	Het
Or8g30	T	C	9: 39,230,487 (GRCm39)	Y141C	probably benign	Het
Pabpc6	T	C	17: 9,886,769 (GRCm39)	E594G	probably damaging	Het
Pald1	A	T	10: 61,176,989 (GRCm39)		probably null	Het
Pdpk1	A	G	17: 24,325,938 (GRCm39)	I113T	possibly damaging	Het
Perm1	TGCCTCTGAGCCTGACACGGCTTTGTCTACACCCGCCTCTGAGCCTGACACGGCTTTGTCTACACCCGCCTCTGAGCCTGACACGGCTTTGTCTACACCCGCCTCT	TGCCTCTGAGCCTGACACGGCTTTGTCTACACCCGCCTCTGAGCCTGACACGGCTTTGTCTACACCCGCCTCT	4: 156,302,525 (GRCm39)		probably benign	Het
Pi4kb	T	C	3: 94,906,219 (GRCm39)	S589P	probably damaging	Het
Pik3ca	G	A	3: 32,496,981 (GRCm39)		probably null	Het
Plekhg4	A	T	8: 106,103,271 (GRCm39)	M315L	probably benign	Het
Proz	G	A	8: 13,123,472 (GRCm39)	V248M	possibly damaging	Het
Prss1	T	C	6: 41,438,183 (GRCm39)	Y37H	probably damaging	Het
R3hdml	T	A	2: 163,337,612 (GRCm39)	W89R	probably damaging	Het
Ranbp3l	A	G	15: 9,057,293 (GRCm39)	T319A	probably benign	Het
Scn4a	C	T	11: 106,215,054 (GRCm39)	A1246T	probably damaging	Het
Sdr42e1	T	A	8: 118,389,999 (GRCm39)	Y214F	probably benign	Het
Slc10a2	C	T	8: 5,148,565 (GRCm39)	V127I	probably benign	Het
Slc16a1	T	A	3: 104,560,148 (GRCm39)	M151K	possibly damaging	Het
Slc25a25	C	T	2: 32,310,391 (GRCm39)	E123K	probably damaging	Het
Ssbp2	T	A	13: 91,818,525 (GRCm39)	M171K	possibly damaging	Het
Tmco1	C	T	1: 167,136,132 (GRCm39)		probably benign	Het
Tspan18	T	G	2: 93,040,200 (GRCm39)	D185A	probably benign	Het
Tti2	T	A	8: 31,645,570 (GRCm39)	F320Y	probably damaging	Het
Ttn	T	C	2: 76,608,621 (GRCm39)	I17798M	probably damaging	Het
Ube2j1	C	A	4: 33,036,759 (GRCm39)	H28N	probably benign	Het
Vmn1r195	A	C	13: 22,463,342 (GRCm39)	I271L	possibly damaging	Het
Vmn2r81	A	C	10: 79,103,166 (GRCm39)	T120P	possibly damaging	Het
Vmn2r-ps158	A	T	7: 42,673,965 (GRCm39)	Y348F	possibly damaging	Het
Wtip	A	G	7: 33,824,908 (GRCm39)		probably null	Het
Zc3h12d	C	T	10: 7,729,022 (GRCm39)	H129Y	probably damaging	Het
Zfp600	T	G	4: 146,131,673 (GRCm39)	S114A	possibly damaging	Het

Other mutations in Styk1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00822:Styk1	APN	6	131,278,625 (GRCm39)	missense	possibly damaging	0.75
IGL01370:Styk1	APN	6	131,278,615 (GRCm39)	missense	probably damaging	1.00
IGL01833:Styk1	APN	6	131,279,329 (GRCm39)	splice site	probably benign
IGL02705:Styk1	APN	6	131,289,546 (GRCm39)	missense	probably benign	0.02
IGL03029:Styk1	APN	6	131,277,523 (GRCm39)	missense	probably benign	0.27
conviction	UTSW	6	131,289,539 (GRCm39)	missense	probably benign	0.01
will	UTSW	6	131,289,880 (GRCm39)	critical splice donor site	probably null
R0201:Styk1	UTSW	6	131,278,693 (GRCm39)	splice site	probably benign
R2267:Styk1	UTSW	6	131,289,539 (GRCm39)	missense	probably benign	0.01
R2268:Styk1	UTSW	6	131,289,539 (GRCm39)	missense	probably benign	0.01
R2269:Styk1	UTSW	6	131,289,539 (GRCm39)	missense	probably benign	0.01
R2919:Styk1	UTSW	6	131,289,967 (GRCm39)	start gained	probably benign
R3153:Styk1	UTSW	6	131,286,975 (GRCm39)	nonsense	probably null
R3154:Styk1	UTSW	6	131,286,975 (GRCm39)	nonsense	probably null
R4041:Styk1	UTSW	6	131,289,880 (GRCm39)	critical splice donor site	probably null
R4650:Styk1	UTSW	6	131,277,532 (GRCm39)	missense	probably damaging	1.00
R4739:Styk1	UTSW	6	131,277,429 (GRCm39)	missense	probably damaging	1.00
R5079:Styk1	UTSW	6	131,278,676 (GRCm39)	missense	probably damaging	1.00
R5497:Styk1	UTSW	6	131,281,670 (GRCm39)	missense	probably damaging	0.97
R5637:Styk1	UTSW	6	131,277,381 (GRCm39)	missense	possibly damaging	0.82
R6137:Styk1	UTSW	6	131,287,979 (GRCm39)	missense	probably damaging	1.00
R6429:Styk1	UTSW	6	131,287,027 (GRCm39)	missense	possibly damaging	0.93
R7522:Styk1	UTSW	6	131,289,803 (GRCm39)	splice site	probably null
R8188:Styk1	UTSW	6	131,281,848 (GRCm39)	missense	probably benign	0.43
R9704:Styk1	UTSW	6	131,278,612 (GRCm39)	small deletion	probably benign
R9705:Styk1	UTSW	6	131,278,612 (GRCm39)	small deletion	probably benign
R9712:Styk1	UTSW	6	131,278,612 (GRCm39)	small deletion	probably benign
R9714:Styk1	UTSW	6	131,278,612 (GRCm39)	small deletion	probably benign
R9715:Styk1	UTSW	6	131,278,612 (GRCm39)	small deletion	probably benign
R9725:Styk1	UTSW	6	131,278,612 (GRCm39)	small deletion	probably benign
R9725:Styk1	UTSW	6	131,278,610 (GRCm39)	small deletion	probably benign
R9750:Styk1	UTSW	6	131,278,612 (GRCm39)	small deletion	probably benign
R9751:Styk1	UTSW	6	131,278,612 (GRCm39)	small deletion	probably benign
R9752:Styk1	UTSW	6	131,278,612 (GRCm39)	small deletion	probably benign
R9753:Styk1	UTSW	6	131,278,612 (GRCm39)	small deletion	probably benign
R9771:Styk1	UTSW	6	131,278,612 (GRCm39)	small deletion	probably benign
R9778:Styk1	UTSW	6	131,287,992 (GRCm39)	nonsense	probably null
X0021:Styk1	UTSW	6	131,284,032 (GRCm39)	critical splice donor site	probably null
X0026:Styk1	UTSW	6	131,287,902 (GRCm39)	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- GCCACAGTACCATTTAAAGGTG -3'
(R):5'- CCAACTGCATGTGCCTTTTG -3'

Sequencing Primer
(F):5'- AATGGAGGCATATTTTGACATGTG -3'
(R):5'- GCATGTGCCTTTTGCTCCTTG -3'

Posted On

2022-03-25