Incidental Mutation 'R9258:Trpm1'
ID |
702018 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Trpm1
|
Ensembl Gene |
ENSMUSG00000030523 |
Gene Name |
transient receptor potential cation channel, subfamily M, member 1 |
Synonyms |
Mlsn1, melastatin, 4732499L03Rik, LTRPC1 |
MMRRC Submission |
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R9258 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
7 |
Chromosomal Location |
63803583-63919523 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 63884713 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Methionine to Threonine
at position 798
(M798T)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000082318
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000085222]
[ENSMUST00000206263]
[ENSMUST00000206277]
[ENSMUST00000206314]
|
AlphaFold |
Q2TV84 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000085222
AA Change: M798T
PolyPhen 2
Score 0.010 (Sensitivity: 0.96; Specificity: 0.77)
|
SMART Domains |
Protein: ENSMUSP00000082318 Gene: ENSMUSG00000030523 AA Change: M798T
Domain | Start | End | E-Value | Type |
low complexity region
|
8 |
28 |
N/A |
INTRINSIC |
low complexity region
|
183 |
195 |
N/A |
INTRINSIC |
low complexity region
|
289 |
307 |
N/A |
INTRINSIC |
low complexity region
|
456 |
491 |
N/A |
INTRINSIC |
Blast:ANK
|
505 |
533 |
1e-5 |
BLAST |
low complexity region
|
621 |
650 |
N/A |
INTRINSIC |
low complexity region
|
823 |
835 |
N/A |
INTRINSIC |
transmembrane domain
|
876 |
895 |
N/A |
INTRINSIC |
Pfam:Ion_trans
|
907 |
1120 |
6e-16 |
PFAM |
transmembrane domain
|
1150 |
1167 |
N/A |
INTRINSIC |
low complexity region
|
1216 |
1225 |
N/A |
INTRINSIC |
PDB:3E7K|H
|
1228 |
1279 |
1e-7 |
PDB |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000206263
AA Change: M682T
PolyPhen 2
Score 0.010 (Sensitivity: 0.96; Specificity: 0.77)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000206277
AA Change: M798T
PolyPhen 2
Score 0.027 (Sensitivity: 0.95; Specificity: 0.81)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000206314
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.8%
- 20x: 99.3%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the transient receptor potential melastatin subfamily of transient receptor potential ion channels. The encoded protein is a calcium permeable cation channel that is expressed in melanocytes and may play a role in melanin synthesis. Specific mutations in this gene are the cause autosomal recessive complete congenital stationary night blindness-1C. The expression of this protein is inversely correlated with melanoma aggressiveness and as such it is used as a prognostic marker for melanoma metastasis. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Oct 2011] PHENOTYPE: Homozygous mutants have defects in rod and cone electrophysiology affecting the photoresponses. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 97 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abcb10 |
T |
A |
8: 124,709,347 (GRCm39) |
Q69L |
probably benign |
Het |
Abtb2 |
A |
C |
2: 103,546,410 (GRCm39) |
Q930P |
probably null |
Het |
Adam18 |
G |
A |
8: 25,158,574 (GRCm39) |
T73I |
probably benign |
Het |
Ankrd54 |
A |
T |
15: 78,946,996 (GRCm39) |
M1K |
probably null |
Het |
Anks1 |
T |
C |
17: 28,277,400 (GRCm39) |
V1106A |
probably damaging |
Het |
Aox1 |
A |
T |
1: 58,351,515 (GRCm39) |
I701F |
probably damaging |
Het |
Arfgef3 |
C |
T |
10: 18,465,387 (GRCm39) |
R2152H |
probably damaging |
Het |
Arnt2 |
C |
T |
7: 84,010,798 (GRCm39) |
G37E |
probably damaging |
Het |
Arpp21 |
G |
A |
9: 111,953,956 (GRCm39) |
T581M |
probably benign |
Het |
Arvcf |
A |
G |
16: 18,216,957 (GRCm39) |
N428S |
probably damaging |
Het |
C2cd3 |
A |
G |
7: 100,098,026 (GRCm39) |
E1471G |
|
Het |
Cadm1 |
A |
G |
9: 47,710,730 (GRCm39) |
K211R |
probably benign |
Het |
Cdh6 |
A |
G |
15: 13,064,462 (GRCm39) |
S143P |
probably damaging |
Het |
Cep152 |
G |
A |
2: 125,421,356 (GRCm39) |
Q1125* |
probably null |
Het |
Cfap54 |
A |
C |
10: 92,770,960 (GRCm39) |
S2095A |
unknown |
Het |
Col12a1 |
T |
C |
9: 79,613,645 (GRCm39) |
T67A |
probably benign |
Het |
Col6a3 |
T |
C |
1: 90,700,703 (GRCm39) |
N3216S |
unknown |
Het |
Cpeb2 |
T |
A |
5: 43,391,455 (GRCm39) |
L217Q |
|
Het |
Ctbp2 |
A |
T |
7: 132,597,021 (GRCm39) |
N119K |
probably damaging |
Het |
Des |
G |
T |
1: 75,340,289 (GRCm39) |
V399L |
probably benign |
Het |
Dnah2 |
G |
T |
11: 69,368,079 (GRCm39) |
H1753Q |
probably damaging |
Het |
Dnajc6 |
T |
C |
4: 101,475,813 (GRCm39) |
V562A |
probably benign |
Het |
Dusp13b |
T |
C |
14: 21,791,155 (GRCm39) |
D99G |
probably benign |
Het |
Ehd3 |
A |
G |
17: 74,127,561 (GRCm39) |
I165V |
probably benign |
Het |
Eme2 |
C |
T |
17: 25,112,053 (GRCm39) |
V241M |
probably damaging |
Het |
Eml5 |
A |
G |
12: 98,810,376 (GRCm39) |
L860P |
possibly damaging |
Het |
Eogt |
T |
A |
6: 97,089,043 (GRCm39) |
K521M |
possibly damaging |
Het |
Epb41l5 |
T |
C |
1: 119,506,701 (GRCm39) |
T489A |
probably benign |
Het |
Fmo5 |
G |
T |
3: 97,558,802 (GRCm39) |
V421L |
probably benign |
Het |
Gabpa |
C |
T |
16: 84,653,403 (GRCm39) |
P268S |
probably benign |
Het |
Gas2l3 |
G |
T |
10: 89,262,315 (GRCm39) |
H136N |
probably benign |
Het |
Gm5592 |
C |
T |
7: 40,938,407 (GRCm39) |
A563V |
possibly damaging |
Het |
Gpn3 |
A |
T |
5: 122,519,508 (GRCm39) |
D205V |
probably benign |
Het |
H13 |
T |
C |
2: 152,522,999 (GRCm39) |
L104S |
probably damaging |
Het |
H2-Q4 |
T |
A |
17: 35,599,105 (GRCm39) |
V125E |
probably benign |
Het |
Ifih1 |
A |
G |
2: 62,442,242 (GRCm39) |
F374S |
probably damaging |
Het |
Ildr2 |
A |
G |
1: 166,131,158 (GRCm39) |
D338G |
probably damaging |
Het |
Kmt2b |
A |
T |
7: 30,281,893 (GRCm39) |
N1162K |
probably null |
Het |
Lmntd1 |
T |
C |
6: 145,359,256 (GRCm39) |
D298G |
probably damaging |
Het |
Lrrc32 |
T |
A |
7: 98,148,345 (GRCm39) |
V375E |
probably benign |
Het |
Lrrc37a |
A |
C |
11: 103,393,022 (GRCm39) |
I801R |
probably benign |
Het |
Matcap1 |
A |
G |
8: 106,008,775 (GRCm39) |
V414A |
probably damaging |
Het |
Mgam |
A |
G |
6: 40,657,121 (GRCm39) |
E935G |
probably benign |
Het |
Mms22l |
A |
T |
4: 24,588,238 (GRCm39) |
T917S |
probably damaging |
Het |
Myo3a |
A |
T |
2: 22,467,545 (GRCm39) |
E1204D |
possibly damaging |
Het |
Nav3 |
T |
A |
10: 109,550,243 (GRCm39) |
E1829V |
probably damaging |
Het |
Nccrp1 |
C |
T |
7: 28,245,632 (GRCm39) |
G150D |
probably damaging |
Het |
Nlrp4b |
G |
T |
7: 10,444,087 (GRCm39) |
W12L |
probably damaging |
Het |
Nmb |
T |
C |
7: 80,554,001 (GRCm39) |
T71A |
possibly damaging |
Het |
Ogfod2 |
T |
A |
5: 124,250,505 (GRCm39) |
H35Q |
probably benign |
Het |
Ola1 |
A |
T |
2: 72,929,732 (GRCm39) |
S290R |
probably damaging |
Het |
Or1e30 |
T |
G |
11: 73,678,281 (GRCm39) |
N172K |
probably benign |
Het |
Or4k47 |
A |
T |
2: 111,452,329 (GRCm39) |
I30N |
possibly damaging |
Het |
Or51v15-ps1 |
T |
G |
7: 103,278,543 (GRCm39) |
Y208S |
unknown |
Het |
Or52e2 |
C |
A |
7: 102,804,409 (GRCm39) |
E182* |
probably null |
Het |
Or5p68 |
T |
G |
7: 107,945,886 (GRCm39) |
T101P |
probably benign |
Het |
Or9i14 |
A |
T |
19: 13,792,099 (GRCm39) |
L285* |
probably null |
Het |
Pcsk9 |
T |
C |
4: 106,316,047 (GRCm39) |
D132G |
possibly damaging |
Het |
Pkhd1 |
A |
T |
1: 20,444,174 (GRCm39) |
V2296E |
probably damaging |
Het |
Prl2c5 |
A |
T |
13: 13,365,297 (GRCm39) |
I151L |
probably damaging |
Het |
Prl3d3 |
A |
T |
13: 27,344,931 (GRCm39) |
D101V |
possibly damaging |
Het |
Prrt1 |
A |
G |
17: 34,850,120 (GRCm39) |
Y178C |
probably damaging |
Het |
Rasal1 |
A |
T |
5: 120,793,155 (GRCm39) |
I87F |
possibly damaging |
Het |
Rpgrip1l |
A |
T |
8: 91,987,614 (GRCm39) |
Y814* |
probably null |
Het |
Rpl3l |
T |
G |
17: 24,951,447 (GRCm39) |
|
probably null |
Het |
Rrbp1 |
C |
A |
2: 143,853,161 (GRCm39) |
|
probably benign |
Het |
Ryr3 |
A |
G |
2: 112,483,364 (GRCm39) |
S4158P |
probably damaging |
Het |
Scube2 |
G |
T |
7: 109,398,515 (GRCm39) |
S951Y |
probably damaging |
Het |
Sec14l1 |
T |
C |
11: 117,041,002 (GRCm39) |
V396A |
probably benign |
Het |
Sh3gl1 |
T |
A |
17: 56,325,911 (GRCm39) |
K173* |
probably null |
Het |
Shank3 |
A |
T |
15: 89,388,521 (GRCm39) |
E371V |
probably damaging |
Het |
Slc25a24 |
A |
G |
3: 109,066,751 (GRCm39) |
T302A |
probably damaging |
Het |
Slc25a41 |
A |
T |
17: 57,348,580 (GRCm39) |
H4Q |
probably benign |
Het |
Slc45a1 |
A |
T |
4: 150,723,071 (GRCm39) |
V271D |
possibly damaging |
Het |
Smad6 |
A |
T |
9: 63,927,573 (GRCm39) |
L245Q |
probably damaging |
Het |
Smad7 |
C |
A |
18: 75,527,317 (GRCm39) |
Q388K |
probably damaging |
Het |
Snx29 |
G |
T |
16: 11,532,799 (GRCm39) |
D348Y |
possibly damaging |
Het |
Son |
A |
T |
16: 91,474,570 (GRCm39) |
H2418L |
unknown |
Het |
Sppl3 |
G |
A |
5: 115,233,922 (GRCm39) |
V331M |
probably damaging |
Het |
St13 |
T |
G |
15: 81,272,569 (GRCm39) |
T92P |
probably benign |
Het |
St3gal4 |
A |
G |
9: 34,963,643 (GRCm39) |
W222R |
probably damaging |
Het |
Stk32a |
T |
A |
18: 43,444,999 (GRCm39) |
N264K |
probably benign |
Het |
Stoml3 |
T |
A |
3: 53,405,397 (GRCm39) |
I26N |
possibly damaging |
Het |
Taf7 |
T |
C |
18: 37,776,021 (GRCm39) |
E182G |
probably damaging |
Het |
Tas2r138 |
A |
G |
6: 40,590,129 (GRCm39) |
V39A |
probably damaging |
Het |
Tbc1d12 |
A |
G |
19: 38,889,823 (GRCm39) |
S418G |
possibly damaging |
Het |
Tbr1 |
T |
A |
2: 61,642,723 (GRCm39) |
C663S |
probably benign |
Het |
Tmc5 |
A |
T |
7: 118,222,501 (GRCm39) |
Y67F |
probably benign |
Het |
Tnfsf4 |
A |
C |
1: 161,244,814 (GRCm39) |
I168L |
probably benign |
Het |
Trav5-1 |
T |
G |
14: 52,860,347 (GRCm39) |
S51A |
probably benign |
Het |
Trmt10c |
A |
T |
16: 55,854,646 (GRCm39) |
C330S |
possibly damaging |
Het |
Unc13d |
AATGCCTCCCATGCC |
AATGCCTCCCATGCCTCCCATGCC |
11: 115,958,998 (GRCm39) |
|
probably benign |
Het |
Unc13d |
CATGCC |
CATGCCTCCGATGCC |
11: 115,959,007 (GRCm39) |
|
probably benign |
Het |
Vmn1r199 |
A |
G |
13: 22,566,822 (GRCm39) |
T39A |
possibly damaging |
Het |
Vmn1r74 |
T |
A |
7: 11,580,999 (GRCm39) |
C100S |
possibly damaging |
Het |
Vmn2r77 |
T |
A |
7: 86,452,302 (GRCm39) |
I494K |
possibly damaging |
Het |
Wdr17 |
G |
A |
8: 55,112,654 (GRCm39) |
Q816* |
probably null |
Het |
|
Other mutations in Trpm1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00093:Trpm1
|
APN |
7 |
63,893,198 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00465:Trpm1
|
APN |
7 |
63,897,215 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL01118:Trpm1
|
APN |
7 |
63,885,572 (GRCm39) |
missense |
probably benign |
0.24 |
IGL01148:Trpm1
|
APN |
7 |
63,893,312 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01303:Trpm1
|
APN |
7 |
63,860,578 (GRCm39) |
critical splice acceptor site |
probably benign |
0.00 |
IGL01432:Trpm1
|
APN |
7 |
63,884,767 (GRCm39) |
missense |
probably benign |
0.18 |
IGL01433:Trpm1
|
APN |
7 |
63,854,276 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01506:Trpm1
|
APN |
7 |
63,893,329 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01626:Trpm1
|
APN |
7 |
63,918,637 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01640:Trpm1
|
APN |
7 |
63,876,645 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01899:Trpm1
|
APN |
7 |
63,884,742 (GRCm39) |
missense |
probably benign |
0.24 |
IGL01959:Trpm1
|
APN |
7 |
63,858,723 (GRCm39) |
missense |
possibly damaging |
0.81 |
IGL02210:Trpm1
|
APN |
7 |
63,860,613 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02268:Trpm1
|
APN |
7 |
63,867,362 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02331:Trpm1
|
APN |
7 |
63,884,800 (GRCm39) |
missense |
probably benign |
0.30 |
IGL02334:Trpm1
|
APN |
7 |
63,895,690 (GRCm39) |
critical splice acceptor site |
probably null |
|
IGL02407:Trpm1
|
APN |
7 |
63,868,869 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02425:Trpm1
|
APN |
7 |
63,890,175 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02485:Trpm1
|
APN |
7 |
63,918,862 (GRCm39) |
missense |
possibly damaging |
0.52 |
IGL02635:Trpm1
|
APN |
7 |
63,848,972 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02640:Trpm1
|
APN |
7 |
63,868,881 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL02827:Trpm1
|
APN |
7 |
63,868,908 (GRCm39) |
missense |
probably null |
1.00 |
PIT4458001:Trpm1
|
UTSW |
7 |
63,918,309 (GRCm39) |
missense |
possibly damaging |
0.94 |
PIT4544001:Trpm1
|
UTSW |
7 |
63,848,998 (GRCm39) |
intron |
probably benign |
|
R0012:Trpm1
|
UTSW |
7 |
63,918,339 (GRCm39) |
missense |
possibly damaging |
0.88 |
R0014:Trpm1
|
UTSW |
7 |
63,897,970 (GRCm39) |
missense |
probably damaging |
1.00 |
R0056:Trpm1
|
UTSW |
7 |
63,893,334 (GRCm39) |
missense |
probably damaging |
1.00 |
R0445:Trpm1
|
UTSW |
7 |
63,894,590 (GRCm39) |
unclassified |
probably benign |
|
R0463:Trpm1
|
UTSW |
7 |
63,870,002 (GRCm39) |
missense |
probably benign |
0.05 |
R0469:Trpm1
|
UTSW |
7 |
63,873,506 (GRCm39) |
missense |
probably damaging |
1.00 |
R0510:Trpm1
|
UTSW |
7 |
63,873,506 (GRCm39) |
missense |
probably damaging |
1.00 |
R1301:Trpm1
|
UTSW |
7 |
63,852,801 (GRCm39) |
splice site |
probably null |
|
R1397:Trpm1
|
UTSW |
7 |
63,867,406 (GRCm39) |
missense |
probably damaging |
1.00 |
R1588:Trpm1
|
UTSW |
7 |
63,873,565 (GRCm39) |
missense |
possibly damaging |
0.93 |
R1618:Trpm1
|
UTSW |
7 |
63,890,283 (GRCm39) |
missense |
probably damaging |
1.00 |
R1724:Trpm1
|
UTSW |
7 |
63,885,569 (GRCm39) |
nonsense |
probably null |
|
R1827:Trpm1
|
UTSW |
7 |
63,884,755 (GRCm39) |
missense |
probably damaging |
1.00 |
R1829:Trpm1
|
UTSW |
7 |
63,876,530 (GRCm39) |
missense |
probably damaging |
1.00 |
R1835:Trpm1
|
UTSW |
7 |
63,880,016 (GRCm39) |
missense |
probably damaging |
1.00 |
R1864:Trpm1
|
UTSW |
7 |
63,917,764 (GRCm39) |
missense |
probably damaging |
1.00 |
R1895:Trpm1
|
UTSW |
7 |
63,873,556 (GRCm39) |
missense |
probably damaging |
1.00 |
R1946:Trpm1
|
UTSW |
7 |
63,873,556 (GRCm39) |
missense |
probably damaging |
1.00 |
R1959:Trpm1
|
UTSW |
7 |
63,879,978 (GRCm39) |
missense |
probably damaging |
1.00 |
R1960:Trpm1
|
UTSW |
7 |
63,879,978 (GRCm39) |
missense |
probably damaging |
1.00 |
R1980:Trpm1
|
UTSW |
7 |
63,858,182 (GRCm39) |
missense |
possibly damaging |
0.83 |
R1989:Trpm1
|
UTSW |
7 |
63,858,780 (GRCm39) |
intron |
probably null |
|
R2054:Trpm1
|
UTSW |
7 |
63,890,303 (GRCm39) |
missense |
possibly damaging |
0.69 |
R2156:Trpm1
|
UTSW |
7 |
63,884,736 (GRCm39) |
missense |
probably damaging |
1.00 |
R2251:Trpm1
|
UTSW |
7 |
63,859,724 (GRCm39) |
missense |
probably damaging |
1.00 |
R3051:Trpm1
|
UTSW |
7 |
63,918,849 (GRCm39) |
missense |
probably damaging |
1.00 |
R3148:Trpm1
|
UTSW |
7 |
63,884,760 (GRCm39) |
missense |
probably benign |
0.00 |
R3195:Trpm1
|
UTSW |
7 |
63,849,061 (GRCm39) |
nonsense |
probably null |
|
R3615:Trpm1
|
UTSW |
7 |
63,893,318 (GRCm39) |
missense |
probably damaging |
1.00 |
R3616:Trpm1
|
UTSW |
7 |
63,893,318 (GRCm39) |
missense |
probably damaging |
1.00 |
R3623:Trpm1
|
UTSW |
7 |
63,894,601 (GRCm39) |
missense |
probably damaging |
1.00 |
R3624:Trpm1
|
UTSW |
7 |
63,894,601 (GRCm39) |
missense |
probably damaging |
1.00 |
R3721:Trpm1
|
UTSW |
7 |
63,867,475 (GRCm39) |
intron |
probably benign |
|
R3822:Trpm1
|
UTSW |
7 |
63,867,451 (GRCm39) |
intron |
probably benign |
|
R4441:Trpm1
|
UTSW |
7 |
63,851,666 (GRCm39) |
missense |
probably damaging |
1.00 |
R4490:Trpm1
|
UTSW |
7 |
63,858,660 (GRCm39) |
nonsense |
probably null |
|
R4666:Trpm1
|
UTSW |
7 |
63,852,782 (GRCm39) |
missense |
probably damaging |
1.00 |
R4701:Trpm1
|
UTSW |
7 |
63,893,248 (GRCm39) |
missense |
probably damaging |
1.00 |
R4781:Trpm1
|
UTSW |
7 |
63,884,800 (GRCm39) |
missense |
probably benign |
0.30 |
R4811:Trpm1
|
UTSW |
7 |
63,858,054 (GRCm39) |
missense |
probably damaging |
1.00 |
R5017:Trpm1
|
UTSW |
7 |
63,894,580 (GRCm39) |
unclassified |
probably benign |
|
R5030:Trpm1
|
UTSW |
7 |
63,885,579 (GRCm39) |
missense |
probably damaging |
1.00 |
R5195:Trpm1
|
UTSW |
7 |
63,887,441 (GRCm39) |
missense |
possibly damaging |
0.84 |
R5238:Trpm1
|
UTSW |
7 |
63,918,702 (GRCm39) |
missense |
probably damaging |
1.00 |
R5304:Trpm1
|
UTSW |
7 |
63,858,694 (GRCm39) |
missense |
probably benign |
0.00 |
R5575:Trpm1
|
UTSW |
7 |
63,870,018 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5613:Trpm1
|
UTSW |
7 |
63,858,159 (GRCm39) |
missense |
probably damaging |
1.00 |
R5855:Trpm1
|
UTSW |
7 |
63,918,710 (GRCm39) |
nonsense |
probably null |
|
R5947:Trpm1
|
UTSW |
7 |
63,873,547 (GRCm39) |
missense |
probably benign |
0.07 |
R5988:Trpm1
|
UTSW |
7 |
63,876,553 (GRCm39) |
missense |
probably benign |
0.16 |
R6054:Trpm1
|
UTSW |
7 |
63,918,450 (GRCm39) |
missense |
probably benign |
0.00 |
R6088:Trpm1
|
UTSW |
7 |
63,917,724 (GRCm39) |
missense |
probably damaging |
0.98 |
R6259:Trpm1
|
UTSW |
7 |
63,918,226 (GRCm39) |
missense |
possibly damaging |
0.47 |
R6379:Trpm1
|
UTSW |
7 |
63,848,942 (GRCm39) |
missense |
probably benign |
0.00 |
R6380:Trpm1
|
UTSW |
7 |
63,918,045 (GRCm39) |
missense |
probably benign |
0.24 |
R6429:Trpm1
|
UTSW |
7 |
63,918,252 (GRCm39) |
missense |
probably benign |
0.00 |
R6600:Trpm1
|
UTSW |
7 |
63,803,781 (GRCm39) |
start codon destroyed |
probably null |
0.56 |
R6622:Trpm1
|
UTSW |
7 |
63,890,343 (GRCm39) |
missense |
probably damaging |
0.96 |
R6939:Trpm1
|
UTSW |
7 |
63,918,045 (GRCm39) |
missense |
probably benign |
0.03 |
R6944:Trpm1
|
UTSW |
7 |
63,893,181 (GRCm39) |
missense |
probably damaging |
1.00 |
R7025:Trpm1
|
UTSW |
7 |
63,876,462 (GRCm39) |
critical splice acceptor site |
probably null |
|
R7112:Trpm1
|
UTSW |
7 |
63,885,593 (GRCm39) |
missense |
probably damaging |
0.97 |
R7168:Trpm1
|
UTSW |
7 |
63,918,445 (GRCm39) |
missense |
probably benign |
0.01 |
R7219:Trpm1
|
UTSW |
7 |
63,854,333 (GRCm39) |
missense |
possibly damaging |
0.68 |
R7224:Trpm1
|
UTSW |
7 |
63,868,854 (GRCm39) |
critical splice acceptor site |
probably null |
|
R7285:Trpm1
|
UTSW |
7 |
63,859,729 (GRCm39) |
nonsense |
probably null |
|
R7367:Trpm1
|
UTSW |
7 |
63,918,549 (GRCm39) |
missense |
probably benign |
0.06 |
R7449:Trpm1
|
UTSW |
7 |
63,858,723 (GRCm39) |
missense |
probably benign |
0.14 |
R7466:Trpm1
|
UTSW |
7 |
63,890,330 (GRCm39) |
missense |
probably damaging |
0.99 |
R7498:Trpm1
|
UTSW |
7 |
63,858,657 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7581:Trpm1
|
UTSW |
7 |
63,854,303 (GRCm39) |
missense |
probably benign |
0.00 |
R7776:Trpm1
|
UTSW |
7 |
63,897,939 (GRCm39) |
missense |
probably benign |
0.04 |
R8062:Trpm1
|
UTSW |
7 |
63,851,689 (GRCm39) |
missense |
probably benign |
0.18 |
R8069:Trpm1
|
UTSW |
7 |
63,858,718 (GRCm39) |
missense |
possibly damaging |
0.55 |
R8157:Trpm1
|
UTSW |
7 |
63,849,017 (GRCm39) |
missense |
probably damaging |
1.00 |
R8219:Trpm1
|
UTSW |
7 |
63,851,699 (GRCm39) |
missense |
probably benign |
0.35 |
R8258:Trpm1
|
UTSW |
7 |
63,918,777 (GRCm39) |
missense |
probably benign |
0.10 |
R8259:Trpm1
|
UTSW |
7 |
63,918,777 (GRCm39) |
missense |
probably benign |
0.10 |
R8320:Trpm1
|
UTSW |
7 |
63,918,541 (GRCm39) |
missense |
possibly damaging |
0.56 |
R8536:Trpm1
|
UTSW |
7 |
63,897,155 (GRCm39) |
missense |
probably damaging |
1.00 |
R8544:Trpm1
|
UTSW |
7 |
63,874,356 (GRCm39) |
splice site |
probably null |
|
R8813:Trpm1
|
UTSW |
7 |
63,851,756 (GRCm39) |
missense |
possibly damaging |
0.68 |
R8912:Trpm1
|
UTSW |
7 |
63,918,628 (GRCm39) |
missense |
probably benign |
0.06 |
R8954:Trpm1
|
UTSW |
7 |
63,858,089 (GRCm39) |
missense |
probably damaging |
0.98 |
R9139:Trpm1
|
UTSW |
7 |
63,848,943 (GRCm39) |
missense |
probably benign |
0.00 |
R9205:Trpm1
|
UTSW |
7 |
63,890,319 (GRCm39) |
missense |
possibly damaging |
0.66 |
R9283:Trpm1
|
UTSW |
7 |
63,873,623 (GRCm39) |
missense |
probably benign |
0.18 |
R9394:Trpm1
|
UTSW |
7 |
63,918,480 (GRCm39) |
missense |
probably benign |
0.00 |
R9430:Trpm1
|
UTSW |
7 |
63,873,446 (GRCm39) |
missense |
probably benign |
0.38 |
R9537:Trpm1
|
UTSW |
7 |
63,803,616 (GRCm39) |
unclassified |
probably benign |
|
R9616:Trpm1
|
UTSW |
7 |
63,858,132 (GRCm39) |
missense |
probably damaging |
0.99 |
R9774:Trpm1
|
UTSW |
7 |
63,898,041 (GRCm39) |
missense |
possibly damaging |
0.90 |
X0026:Trpm1
|
UTSW |
7 |
63,918,658 (GRCm39) |
missense |
probably benign |
0.05 |
Z1176:Trpm1
|
UTSW |
7 |
63,854,342 (GRCm39) |
critical splice donor site |
probably null |
|
Z1176:Trpm1
|
UTSW |
7 |
63,852,879 (GRCm39) |
critical splice donor site |
probably null |
|
Z1177:Trpm1
|
UTSW |
7 |
63,867,439 (GRCm39) |
missense |
unknown |
|
|
Predicted Primers |
PCR Primer
(F):5'- AGGATGTGAGCTGCTTTGCC -3'
(R):5'- CCCTGTTAGCAAGCTTTCTAAATG -3'
Sequencing Primer
(F):5'- GAGCTGCTTTGCCCTCCTC -3'
(R):5'- AGCAAGCTTTCTAAATGGTAAACC -3'
|
Posted On |
2022-03-25 |