Incidental Mutation 'R9282:Vmn2r104'
ID |
703713 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn2r104
|
Ensembl Gene |
ENSMUSG00000090315 |
Gene Name |
vomeronasal 2, receptor 104 |
Synonyms |
V2r7 |
MMRRC Submission |
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.108)
|
Stock # |
R9282 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
17 |
Chromosomal Location |
20249687-20268467 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 20261098 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Phenylalanine to Isoleucine
at position 442
(F442I)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000129895
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000168050]
|
AlphaFold |
E9Q2J5 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000168050
AA Change: F442I
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000129895 Gene: ENSMUSG00000090315 AA Change: F442I
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
Pfam:ANF_receptor
|
85 |
457 |
4e-38 |
PFAM |
Pfam:NCD3G
|
512 |
565 |
2.1e-20 |
PFAM |
Pfam:7tm_3
|
598 |
833 |
1.7e-52 |
PFAM |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.7%
- 20x: 98.9%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 54 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abi3bp |
G |
A |
16: 56,440,867 (GRCm39) |
V701M |
unknown |
Het |
Adam2 |
G |
A |
14: 66,267,238 (GRCm39) |
P674S |
probably benign |
Het |
Adam24 |
T |
A |
8: 41,133,674 (GRCm39) |
Y381N |
probably damaging |
Het |
Adgrv1 |
A |
G |
13: 81,251,491 (GRCm39) |
S6209P |
probably damaging |
Het |
Aox4 |
A |
T |
1: 58,285,028 (GRCm39) |
K593N |
possibly damaging |
Het |
Aqp3 |
A |
G |
4: 41,093,640 (GRCm39) |
V258A |
possibly damaging |
Het |
Atg16l1 |
T |
A |
1: 87,707,906 (GRCm39) |
F390I |
possibly damaging |
Het |
B4galt6 |
T |
A |
18: 20,825,509 (GRCm39) |
Y239F |
possibly damaging |
Het |
Cmtr2 |
T |
C |
8: 110,948,977 (GRCm39) |
M429T |
probably benign |
Het |
Col5a2 |
C |
G |
1: 45,478,029 (GRCm39) |
|
probably null |
Het |
Dcc |
T |
C |
18: 71,815,249 (GRCm39) |
D375G |
possibly damaging |
Het |
Dnah14 |
T |
C |
1: 181,642,077 (GRCm39) |
Y31H |
|
Het |
Fam131a |
G |
A |
16: 20,520,243 (GRCm39) |
R232H |
possibly damaging |
Het |
Fam186a |
A |
G |
15: 99,839,879 (GRCm39) |
Y2122H |
probably damaging |
Het |
Focad |
A |
T |
4: 88,115,059 (GRCm39) |
I421F |
unknown |
Het |
Fscb |
T |
G |
12: 64,520,097 (GRCm39) |
E456D |
possibly damaging |
Het |
Furin |
C |
A |
7: 80,040,846 (GRCm39) |
S664I |
probably benign |
Het |
Ganc |
A |
G |
2: 120,290,381 (GRCm39) |
E906G |
probably benign |
Het |
Gdf5 |
C |
G |
2: 155,783,915 (GRCm39) |
D346H |
probably damaging |
Het |
Golga4 |
T |
C |
9: 118,385,893 (GRCm39) |
L1005P |
probably damaging |
Het |
Ifit1bl1 |
T |
C |
19: 34,571,908 (GRCm39) |
N183S |
probably benign |
Het |
Itpr1 |
T |
A |
6: 108,370,984 (GRCm39) |
F1084I |
probably damaging |
Het |
Katnal1 |
A |
T |
5: 148,831,021 (GRCm39) |
Y184* |
probably null |
Het |
Lrrc37a |
A |
G |
11: 103,391,633 (GRCm39) |
I1264T |
probably benign |
Het |
Map3k2 |
T |
A |
18: 32,342,805 (GRCm39) |
M234K |
probably damaging |
Het |
Mcm3ap |
T |
A |
10: 76,342,352 (GRCm39) |
V1615E |
probably damaging |
Het |
Mkrn2 |
A |
G |
6: 115,591,534 (GRCm39) |
|
probably null |
Het |
Nicn1 |
C |
T |
9: 108,171,708 (GRCm39) |
R163C |
possibly damaging |
Het |
Nradd |
T |
A |
9: 110,450,751 (GRCm39) |
Q142L |
possibly damaging |
Het |
Ophn1 |
G |
A |
X: 97,622,145 (GRCm39) |
T668M |
probably benign |
Het |
Or56b35 |
T |
C |
7: 104,963,781 (GRCm39) |
I190T |
probably benign |
Het |
Pdzd7 |
A |
G |
19: 45,028,622 (GRCm39) |
F174L |
probably damaging |
Het |
Pi4k2b |
C |
T |
5: 52,900,879 (GRCm39) |
T99I |
probably benign |
Het |
Pigv |
A |
T |
4: 133,391,973 (GRCm39) |
V399D |
probably damaging |
Het |
Pla2g4a |
C |
A |
1: 149,747,207 (GRCm39) |
L326F |
probably damaging |
Het |
Psmg1 |
T |
C |
16: 95,790,717 (GRCm39) |
I73M |
probably damaging |
Het |
Rcl1 |
T |
C |
19: 29,093,170 (GRCm39) |
S62P |
probably damaging |
Het |
Slc23a4 |
T |
A |
6: 34,955,861 (GRCm39) |
I58F |
probably damaging |
Het |
Slc36a2 |
G |
T |
11: 55,060,837 (GRCm39) |
T191K |
probably benign |
Het |
Sorbs2 |
T |
G |
8: 46,248,774 (GRCm39) |
V675G |
probably benign |
Het |
Tbc1d30 |
T |
C |
10: 121,142,128 (GRCm39) |
|
probably null |
Het |
Tbc1d4 |
A |
G |
14: 101,845,616 (GRCm39) |
V94A |
possibly damaging |
Het |
Tdrd5 |
T |
C |
1: 156,105,030 (GRCm39) |
Y532C |
probably benign |
Het |
Tll2 |
T |
A |
19: 41,074,772 (GRCm39) |
I931L |
probably benign |
Het |
Tlr3 |
T |
C |
8: 45,851,643 (GRCm39) |
N418S |
probably benign |
Het |
Tmco1 |
C |
T |
1: 167,136,132 (GRCm39) |
|
probably benign |
Het |
Tshr |
T |
A |
12: 91,474,518 (GRCm39) |
M164K |
possibly damaging |
Het |
Ttc21b |
A |
G |
2: 66,056,349 (GRCm39) |
V679A |
possibly damaging |
Het |
Ttn |
A |
G |
2: 76,730,861 (GRCm39) |
Y4951H |
unknown |
Het |
Usf1 |
T |
A |
1: 171,243,373 (GRCm39) |
V50D |
possibly damaging |
Het |
Utp6 |
A |
T |
11: 79,826,851 (GRCm39) |
M575K |
probably benign |
Het |
Vmn1r197 |
A |
T |
13: 22,512,608 (GRCm39) |
R176S |
possibly damaging |
Het |
Vmn2r94 |
A |
G |
17: 18,497,751 (GRCm39) |
F7S |
possibly damaging |
Het |
Vps41 |
G |
T |
13: 19,013,401 (GRCm39) |
E340* |
probably null |
Het |
|
Other mutations in Vmn2r104 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00427:Vmn2r104
|
APN |
17 |
20,258,501 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL01098:Vmn2r104
|
APN |
17 |
20,268,358 (GRCm39) |
missense |
probably benign |
0.27 |
IGL01333:Vmn2r104
|
APN |
17 |
20,263,055 (GRCm39) |
missense |
probably benign |
0.17 |
IGL01527:Vmn2r104
|
APN |
17 |
20,263,158 (GRCm39) |
missense |
possibly damaging |
0.82 |
IGL01773:Vmn2r104
|
APN |
17 |
20,260,930 (GRCm39) |
missense |
probably benign |
0.10 |
IGL01939:Vmn2r104
|
APN |
17 |
20,250,187 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02121:Vmn2r104
|
APN |
17 |
20,262,056 (GRCm39) |
nonsense |
probably null |
|
IGL02305:Vmn2r104
|
APN |
17 |
20,263,118 (GRCm39) |
missense |
probably benign |
0.09 |
IGL02374:Vmn2r104
|
APN |
17 |
20,263,048 (GRCm39) |
missense |
probably benign |
0.34 |
IGL03260:Vmn2r104
|
APN |
17 |
20,263,083 (GRCm39) |
missense |
probably benign |
0.05 |
IGL03366:Vmn2r104
|
APN |
17 |
20,249,866 (GRCm39) |
missense |
probably damaging |
1.00 |
R0091:Vmn2r104
|
UTSW |
17 |
20,262,075 (GRCm39) |
missense |
possibly damaging |
0.79 |
R0125:Vmn2r104
|
UTSW |
17 |
20,250,069 (GRCm39) |
missense |
probably damaging |
0.98 |
R0257:Vmn2r104
|
UTSW |
17 |
20,249,889 (GRCm39) |
missense |
probably damaging |
1.00 |
R0381:Vmn2r104
|
UTSW |
17 |
20,268,264 (GRCm39) |
nonsense |
probably null |
|
R0709:Vmn2r104
|
UTSW |
17 |
20,263,166 (GRCm39) |
missense |
probably damaging |
1.00 |
R0786:Vmn2r104
|
UTSW |
17 |
20,262,987 (GRCm39) |
missense |
probably benign |
|
R1575:Vmn2r104
|
UTSW |
17 |
20,262,477 (GRCm39) |
missense |
probably damaging |
1.00 |
R1827:Vmn2r104
|
UTSW |
17 |
20,262,497 (GRCm39) |
missense |
probably damaging |
0.97 |
R1932:Vmn2r104
|
UTSW |
17 |
20,261,031 (GRCm39) |
missense |
probably damaging |
1.00 |
R1956:Vmn2r104
|
UTSW |
17 |
20,262,313 (GRCm39) |
missense |
probably damaging |
0.98 |
R2203:Vmn2r104
|
UTSW |
17 |
20,250,083 (GRCm39) |
missense |
probably benign |
0.05 |
R2205:Vmn2r104
|
UTSW |
17 |
20,250,083 (GRCm39) |
missense |
probably benign |
0.05 |
R2859:Vmn2r104
|
UTSW |
17 |
20,268,455 (GRCm39) |
missense |
possibly damaging |
0.82 |
R3701:Vmn2r104
|
UTSW |
17 |
20,249,818 (GRCm39) |
missense |
probably damaging |
1.00 |
R3834:Vmn2r104
|
UTSW |
17 |
20,250,183 (GRCm39) |
missense |
probably benign |
0.02 |
R4151:Vmn2r104
|
UTSW |
17 |
20,250,147 (GRCm39) |
missense |
probably damaging |
1.00 |
R4470:Vmn2r104
|
UTSW |
17 |
20,262,503 (GRCm39) |
missense |
probably damaging |
1.00 |
R4625:Vmn2r104
|
UTSW |
17 |
20,268,443 (GRCm39) |
missense |
probably benign |
0.00 |
R4754:Vmn2r104
|
UTSW |
17 |
20,261,030 (GRCm39) |
nonsense |
probably null |
|
R4911:Vmn2r104
|
UTSW |
17 |
20,250,288 (GRCm39) |
missense |
probably benign |
0.00 |
R5270:Vmn2r104
|
UTSW |
17 |
20,258,528 (GRCm39) |
missense |
probably damaging |
1.00 |
R5279:Vmn2r104
|
UTSW |
17 |
20,262,146 (GRCm39) |
missense |
probably benign |
0.07 |
R5311:Vmn2r104
|
UTSW |
17 |
20,250,163 (GRCm39) |
missense |
probably damaging |
1.00 |
R5370:Vmn2r104
|
UTSW |
17 |
20,250,450 (GRCm39) |
missense |
probably damaging |
0.97 |
R5461:Vmn2r104
|
UTSW |
17 |
20,250,343 (GRCm39) |
missense |
probably damaging |
1.00 |
R5683:Vmn2r104
|
UTSW |
17 |
20,260,981 (GRCm39) |
nonsense |
probably null |
|
R5795:Vmn2r104
|
UTSW |
17 |
20,250,544 (GRCm39) |
missense |
possibly damaging |
0.89 |
R5795:Vmn2r104
|
UTSW |
17 |
20,250,372 (GRCm39) |
missense |
probably benign |
0.02 |
R5970:Vmn2r104
|
UTSW |
17 |
20,249,733 (GRCm39) |
missense |
probably benign |
0.01 |
R5983:Vmn2r104
|
UTSW |
17 |
20,261,970 (GRCm39) |
missense |
probably damaging |
1.00 |
R5992:Vmn2r104
|
UTSW |
17 |
20,249,747 (GRCm39) |
missense |
probably damaging |
1.00 |
R6066:Vmn2r104
|
UTSW |
17 |
20,258,573 (GRCm39) |
missense |
possibly damaging |
0.69 |
R6156:Vmn2r104
|
UTSW |
17 |
20,261,909 (GRCm39) |
missense |
probably damaging |
1.00 |
R6182:Vmn2r104
|
UTSW |
17 |
20,250,507 (GRCm39) |
missense |
probably benign |
0.16 |
R6245:Vmn2r104
|
UTSW |
17 |
20,261,829 (GRCm39) |
missense |
possibly damaging |
0.69 |
R6333:Vmn2r104
|
UTSW |
17 |
20,249,848 (GRCm39) |
missense |
probably benign |
0.30 |
R6573:Vmn2r104
|
UTSW |
17 |
20,262,487 (GRCm39) |
missense |
probably damaging |
1.00 |
R7101:Vmn2r104
|
UTSW |
17 |
20,250,358 (GRCm39) |
missense |
possibly damaging |
0.65 |
R7123:Vmn2r104
|
UTSW |
17 |
20,261,088 (GRCm39) |
missense |
probably benign |
0.12 |
R7485:Vmn2r104
|
UTSW |
17 |
20,249,737 (GRCm39) |
missense |
probably benign |
0.01 |
R7514:Vmn2r104
|
UTSW |
17 |
20,249,791 (GRCm39) |
missense |
probably damaging |
1.00 |
R7634:Vmn2r104
|
UTSW |
17 |
20,261,971 (GRCm39) |
missense |
possibly damaging |
0.48 |
R7958:Vmn2r104
|
UTSW |
17 |
20,262,988 (GRCm39) |
missense |
probably benign |
|
R8031:Vmn2r104
|
UTSW |
17 |
20,263,048 (GRCm39) |
missense |
probably benign |
0.34 |
R8094:Vmn2r104
|
UTSW |
17 |
20,250,483 (GRCm39) |
missense |
possibly damaging |
0.77 |
R8191:Vmn2r104
|
UTSW |
17 |
20,250,465 (GRCm39) |
missense |
possibly damaging |
0.89 |
R8308:Vmn2r104
|
UTSW |
17 |
20,261,040 (GRCm39) |
missense |
possibly damaging |
0.55 |
R8691:Vmn2r104
|
UTSW |
17 |
20,262,110 (GRCm39) |
missense |
probably damaging |
0.98 |
R8795:Vmn2r104
|
UTSW |
17 |
20,262,988 (GRCm39) |
missense |
probably benign |
|
R8900:Vmn2r104
|
UTSW |
17 |
20,261,924 (GRCm39) |
missense |
probably damaging |
0.99 |
R8913:Vmn2r104
|
UTSW |
17 |
20,249,968 (GRCm39) |
missense |
probably damaging |
1.00 |
R9180:Vmn2r104
|
UTSW |
17 |
20,263,087 (GRCm39) |
missense |
probably benign |
0.00 |
R9199:Vmn2r104
|
UTSW |
17 |
20,262,097 (GRCm39) |
missense |
probably damaging |
0.99 |
R9303:Vmn2r104
|
UTSW |
17 |
20,268,439 (GRCm39) |
missense |
possibly damaging |
0.90 |
R9305:Vmn2r104
|
UTSW |
17 |
20,268,439 (GRCm39) |
missense |
possibly damaging |
0.90 |
R9322:Vmn2r104
|
UTSW |
17 |
20,263,087 (GRCm39) |
missense |
probably benign |
0.00 |
R9325:Vmn2r104
|
UTSW |
17 |
20,268,433 (GRCm39) |
missense |
possibly damaging |
0.95 |
R9414:Vmn2r104
|
UTSW |
17 |
20,250,250 (GRCm39) |
missense |
probably damaging |
0.99 |
R9785:Vmn2r104
|
UTSW |
17 |
20,268,409 (GRCm39) |
missense |
probably benign |
|
RF007:Vmn2r104
|
UTSW |
17 |
20,268,302 (GRCm39) |
missense |
probably benign |
0.36 |
Z1177:Vmn2r104
|
UTSW |
17 |
20,250,051 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- GTTCAGATAAAGACAACTGTTGACCC -3'
(R):5'- CAGTAGTGATTGATTGCTTACTTGAGC -3'
Sequencing Primer
(F):5'- ACAACTGTTGACCCTGAGGAGC -3'
(R):5'- TTCAGAAGCAGAATGGTAGTTTG -3'
|
Posted On |
2022-03-25 |