Mutagenetix > Incidental Mutation

Incidental Mutation 'R9310:Slco3a1'

705468

Institutional Source

Beutler Lab

Gene Symbol

Slco3a1

Ensembl Gene

ENSMUSG00000025790

Gene Name

solute carrier organic anion transporter family, member 3a1

Synonyms

OATP-D, Slc21a11, 5830414C08Rik, Anr1, MJAM

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.112) question?

Stock #

R9310 (G1)

Quality Score

104.008

Status

Not validated

Chromosome

Chromosomal Location

73925167-74204528 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 74204236 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Cysteine to Serine at position 35 (C35S)

Ref Sequence

ENSEMBL: ENSMUSP00000026897 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000026897] [ENSMUST00000098371] [ENSMUST00000107453] [ENSMUST00000138099]

AlphaFold

Q8R3L5

Predicted Effect

probably damaging
Transcript: ENSMUST00000026897
AA Change: C35S

PolyPhen 2 Score 0.986 (Sensitivity: 0.74; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000026897
Gene: ENSMUSG00000025790
AA Change: C35S

Domain	Start	End	E-Value	Type
low complexity region	7	16	N/A	INTRINSIC
Pfam:MFS_1	44	455	1.2e-27	PFAM
KAZAL	474	509	2.77e-1	SMART
low complexity region	574	594	N/A	INTRINSIC
transmembrane domain	626	648	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000098371
AA Change: C35S

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000095973
Gene: ENSMUSG00000025790
AA Change: C35S

Domain	Start	End	E-Value	Type
low complexity region	7	16	N/A	INTRINSIC
Pfam:MFS_1	44	456	1.2e-27	PFAM
KAZAL	474	509	2.77e-1	SMART
low complexity region	574	594	N/A	INTRINSIC
transmembrane domain	626	648	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000107453
AA Change: C35S

PolyPhen 2 Score 0.986 (Sensitivity: 0.74; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000103077
Gene: ENSMUSG00000025790
AA Change: C35S

Domain	Start	End	E-Value	Type
low complexity region	7	16	N/A	INTRINSIC
Pfam:MFS_1	45	456	2e-27	PFAM
KAZAL	474	509	2.77e-1	SMART
low complexity region	574	589	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000134539

SMART Domains

Protein: ENSMUSP00000116946
Gene: ENSMUSG00000025790

Domain	Start	End	E-Value	Type
Pfam:OATP	3	181	1.6e-56	PFAM
Pfam:MFS_1	6	183	3.3e-10	PFAM
Pfam:OATP	179	219	2.5e-14	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000138099

SMART Domains

Protein: ENSMUSP00000115279
Gene: ENSMUSG00000025790

Domain	Start	End	E-Value	Type
Pfam:OATP	26	165	2.4e-47	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.7%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 95 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700030J22Rik	T	C	8: 117,698,859 (GRCm39)	I83V	possibly damaging	Het
Abcf1	G	A	17: 36,272,621 (GRCm39)	A288V	probably null	Het
Acer1	A	T	17: 57,262,598 (GRCm39)	V184D	probably damaging	Het
Apoh	T	C	11: 108,298,307 (GRCm39)		probably null	Het
Arid1a	T	C	4: 133,413,625 (GRCm39)	Y959C	unknown	Het
Asb3	A	T	11: 30,978,962 (GRCm39)	H84L	probably benign	Het
Atxn1	A	C	13: 45,721,494 (GRCm39)	Y134D	probably damaging	Het
Btbd1	T	C	7: 81,478,985 (GRCm39)	Y52C	probably damaging	Het
Cabp2	A	G	19: 4,136,464 (GRCm39)	D170G	probably damaging	Het
Cacna1a	C	A	8: 85,263,046 (GRCm39)	A407E	probably damaging	Het
Cacna2d4	T	A	6: 119,248,914 (GRCm39)		probably null	Het
Cc2d2a	T	C	5: 43,852,488 (GRCm39)	F404S	probably damaging	Het
Cdh20	T	C	1: 104,875,061 (GRCm39)	M281T	probably damaging	Het
Cfap54	A	T	10: 92,798,177 (GRCm39)	M1694K	unknown	Het
Chd6	G	T	2: 160,881,181 (GRCm39)	T261K	probably damaging	Het
Cnksr1	T	C	4: 133,956,330 (GRCm39)	S585G	probably damaging	Het
Cntnap2	A	T	6: 45,978,281 (GRCm39)	Y312F	probably damaging	Het
Coa7	T	A	4: 108,195,510 (GRCm39)	Y146*	probably null	Het
Col28a1	T	C	6: 8,175,414 (GRCm39)	K145E	unknown	Het
Coq8b	T	A	7: 26,941,486 (GRCm39)	I221N	probably damaging	Het
Cpd	A	T	11: 76,705,607 (GRCm39)	L375*	probably null	Het
Dnah5	T	C	15: 28,448,579 (GRCm39)	F4214S	probably damaging	Het
Dnai3	C	T	3: 145,802,895 (GRCm39)		probably null	Het
Dock2	A	G	11: 34,244,139 (GRCm39)	F1067S	possibly damaging	Het
Dpp6	G	A	5: 27,836,439 (GRCm39)	A310T	probably damaging	Het
Dpp6	C	A	5: 27,930,642 (GRCm39)	L825I	probably benign	Het
Efcab5	A	G	11: 77,004,531 (GRCm39)	V929A	probably benign	Het
Ephx3	C	G	17: 32,408,290 (GRCm39)	D45H	probably benign	Het
Espl1	G	A	15: 102,205,285 (GRCm39)		probably null	Het
Firrm	A	G	1: 163,792,089 (GRCm39)	C610R	probably damaging	Het
Gm4847	T	C	1: 166,460,281 (GRCm39)	R402G	probably benign	Het
Grid1	T	C	14: 34,748,762 (GRCm39)	L194S	probably damaging	Het
Heatr1	A	T	13: 12,453,491 (GRCm39)	H2122L	probably benign	Het
Il17b	T	A	18: 61,825,334 (GRCm39)	C123*	probably null	Het
Il17rc	T	C	6: 113,451,210 (GRCm39)	L181P	probably damaging	Het
Inpp5e	T	A	2: 26,287,940 (GRCm39)	I619L	probably benign	Het
Itgax	C	A	7: 127,741,432 (GRCm39)	Y814*	probably null	Het
Marcks	C	T	10: 37,012,487 (GRCm39)	E183K	unknown	Het
Mefv	T	C	16: 3,533,252 (GRCm39)	T340A	probably benign	Het
Mical2	A	G	7: 111,950,920 (GRCm39)	K958R	probably benign	Het
Mrtfb	T	A	16: 13,218,954 (GRCm39)	D533E	probably benign	Het
Mtor	T	A	4: 148,553,834 (GRCm39)	L811Q	probably benign	Het
Myh4	A	G	11: 67,145,570 (GRCm39)	Y1351C	probably damaging	Het
Neb	T	C	2: 52,153,708 (GRCm39)	M2406V	probably benign	Het
Nebl	T	C	2: 17,353,678 (GRCm39)	T214A	probably benign	Het
Nlrx1	A	T	9: 44,164,705 (GRCm39)	I913N	probably damaging	Het
Npr2	G	T	4: 43,632,404 (GRCm39)	A74S	probably benign	Het
Or4c115	T	A	2: 88,928,257 (GRCm39)	S5C	probably damaging	Het
Or6b6	C	A	7: 106,570,678 (GRCm39)	C291F	probably damaging	Het
Or6c88	T	A	10: 129,406,687 (GRCm39)	N54K	probably benign	Het
Pard3b	G	T	1: 62,205,528 (GRCm39)	V441F	probably damaging	Het
Pcsk1	G	A	13: 75,238,191 (GRCm39)	R4K	probably benign	Het
Pisd	G	T	5: 32,894,784 (GRCm39)	N337K	possibly damaging	Het
Pml	T	C	9: 58,156,945 (GRCm39)	K10R	probably benign	Het
Prkci	T	C	3: 31,083,664 (GRCm39)	W132R	probably damaging	Het
Prrc2a	A	T	17: 35,374,975 (GRCm39)	M1225K	probably benign	Het
Prss23	T	C	7: 89,159,142 (GRCm39)	D309G	probably damaging	Het
Pxdn	G	A	12: 30,052,051 (GRCm39)	G743S	probably damaging	Het
Rab29	A	T	1: 131,799,860 (GRCm39)	E145V	probably damaging	Het
Rasef	C	T	4: 73,653,956 (GRCm39)		probably null	Het
Rcbtb1	T	G	14: 59,472,699 (GRCm39)	I496S	probably benign	Het
Rcor1	T	C	12: 111,066,393 (GRCm39)	Y228H		Het
Reep5	C	T	18: 34,490,222 (GRCm39)	V92I	probably damaging	Het
Rfx3	T	C	19: 27,827,329 (GRCm39)	S86G	probably benign	Het
Rptn	T	A	3: 93,304,384 (GRCm39)	D572E	probably benign	Het
Rsl1	A	T	13: 67,324,510 (GRCm39)		probably null	Het
Sbf2	T	C	7: 109,914,292 (GRCm39)	E1630G	possibly damaging	Het
Sele	G	A	1: 163,876,975 (GRCm39)	V84I	probably benign	Het
Serpina1b	T	C	12: 103,698,756 (GRCm39)	D31G	probably benign	Het
Serpina3c	T	C	12: 104,115,813 (GRCm39)	I244V	probably benign	Het
Serpinb6e	A	G	13: 34,017,204 (GRCm39)	V272A	probably benign	Het
Serpinb9b	A	G	13: 33,219,523 (GRCm39)	D150G	probably benign	Het
Sgpp1	T	C	12: 75,769,374 (GRCm39)	T265A	probably benign	Het
Slc9a1	T	A	4: 133,143,681 (GRCm39)	M389K	probably damaging	Het
Slco6d1	T	A	1: 98,427,619 (GRCm39)	V650E	possibly damaging	Het
Slit2	T	C	5: 48,349,568 (GRCm39)	V274A	possibly damaging	Het
Snd1	A	G	6: 28,795,936 (GRCm39)	E593G	probably null	Het
Spata2l	C	T	8: 123,960,873 (GRCm39)	V139M	probably benign	Het
Suco	T	C	1: 161,684,427 (GRCm39)	K231R	probably damaging	Het
Tenm3	C	A	8: 49,008,935 (GRCm39)		probably benign	Het
Tg	T	C	15: 66,699,118 (GRCm39)	S2415P	possibly damaging	Het
Traf6	C	A	2: 101,527,072 (GRCm39)	A274D	possibly damaging	Het
Usp14	A	G	18: 9,996,239 (GRCm39)	I447T	possibly damaging	Het
Usp32	G	A	11: 84,942,028 (GRCm39)	L355F	probably benign	Het
Vcpip1	T	C	1: 9,817,927 (GRCm39)	N152S	possibly damaging	Het
Vgf	A	G	5: 137,061,110 (GRCm39)	Q424R	probably benign	Het
Vmn2r84	A	T	10: 130,227,993 (GRCm39)	M81K	possibly damaging	Het
Washc5	G	A	15: 59,218,067 (GRCm39)	A732V	possibly damaging	Het
Xrcc3	T	G	12: 111,771,485 (GRCm39)	D213A	probably damaging	Het
Zeb2	T	C	2: 44,886,988 (GRCm39)	T690A	probably benign	Het
Zfat	G	A	15: 67,956,250 (GRCm39)	S1212L	probably damaging	Het
Zfp623	C	T	15: 75,819,949 (GRCm39)	L302F	probably damaging	Het
Zfp799	A	C	17: 33,039,733 (GRCm39)	C178G	possibly damaging	Het
Zfy1	T	C	Y: 727,634 (GRCm39)	E348G	unknown	Het
Zhx3	A	G	2: 160,621,393 (GRCm39)	W925R	possibly damaging	Het

Other mutations in Slco3a1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00897:Slco3a1	APN	7	74,153,931 (GRCm39)	missense	probably damaging	1.00
IGL01124:Slco3a1	APN	7	73,934,295 (GRCm39)	missense	probably damaging	1.00
IGL01583:Slco3a1	APN	7	73,934,198 (GRCm39)	missense	probably benign	0.01
IGL01929:Slco3a1	APN	7	73,968,353 (GRCm39)	splice site	probably benign
IGL01991:Slco3a1	APN	7	73,934,144 (GRCm39)	missense	possibly damaging	0.84
IGL02380:Slco3a1	APN	7	74,204,238 (GRCm39)	missense	probably damaging	1.00
IGL03269:Slco3a1	APN	7	73,968,280 (GRCm39)	missense	possibly damaging	0.58
R0052:Slco3a1	UTSW	7	74,154,074 (GRCm39)	missense	probably benign	0.00
R0052:Slco3a1	UTSW	7	74,154,074 (GRCm39)	missense	probably benign	0.00
R0317:Slco3a1	UTSW	7	74,154,174 (GRCm39)	missense	probably damaging	1.00
R0545:Slco3a1	UTSW	7	73,970,301 (GRCm39)	nonsense	probably null
R0613:Slco3a1	UTSW	7	73,996,382 (GRCm39)	unclassified	probably benign
R1488:Slco3a1	UTSW	7	73,996,449 (GRCm39)	missense	possibly damaging	0.94
R1506:Slco3a1	UTSW	7	74,009,683 (GRCm39)	splice site	probably null
R1571:Slco3a1	UTSW	7	74,154,128 (GRCm39)	missense	possibly damaging	0.92
R1912:Slco3a1	UTSW	7	74,154,359 (GRCm39)	missense	probably damaging	1.00
R2011:Slco3a1	UTSW	7	73,996,419 (GRCm39)	missense	probably benign	0.08
R2382:Slco3a1	UTSW	7	73,996,524 (GRCm39)	missense	probably benign	0.00
R3735:Slco3a1	UTSW	7	74,154,245 (GRCm39)	missense	probably damaging	1.00
R3894:Slco3a1	UTSW	7	73,934,361 (GRCm39)	missense	probably damaging	1.00
R4151:Slco3a1	UTSW	7	74,009,586 (GRCm39)	missense	probably damaging	1.00
R4175:Slco3a1	UTSW	7	73,968,302 (GRCm39)	missense	probably damaging	0.97
R4303:Slco3a1	UTSW	7	74,204,276 (GRCm39)	missense	probably benign	0.03
R4462:Slco3a1	UTSW	7	74,204,311 (GRCm39)	missense	probably benign	0.18
R4702:Slco3a1	UTSW	7	73,970,315 (GRCm39)	missense	probably damaging	0.98
R4896:Slco3a1	UTSW	7	73,970,304 (GRCm39)	missense	probably null	1.00
R5419:Slco3a1	UTSW	7	73,934,363 (GRCm39)	missense	possibly damaging	0.77
R5561:Slco3a1	UTSW	7	73,968,247 (GRCm39)	missense	possibly damaging	0.67
R5597:Slco3a1	UTSW	7	73,934,210 (GRCm39)	missense	probably benign	0.31
R5698:Slco3a1	UTSW	7	73,996,566 (GRCm39)	missense	probably damaging	1.00
R6086:Slco3a1	UTSW	7	73,968,338 (GRCm39)	missense	possibly damaging	0.64
R6117:Slco3a1	UTSW	7	73,968,254 (GRCm39)	missense	probably benign	0.02
R6118:Slco3a1	UTSW	7	73,968,254 (GRCm39)	missense	probably benign	0.02
R6123:Slco3a1	UTSW	7	73,968,254 (GRCm39)	missense	probably benign	0.02
R6124:Slco3a1	UTSW	7	73,968,254 (GRCm39)	missense	probably benign	0.02
R6125:Slco3a1	UTSW	7	73,968,254 (GRCm39)	missense	probably benign	0.02
R7147:Slco3a1	UTSW	7	74,154,042 (GRCm39)	missense	probably damaging	1.00
R7332:Slco3a1	UTSW	7	73,968,232 (GRCm39)	missense	possibly damaging	0.95
R7335:Slco3a1	UTSW	7	73,934,090 (GRCm39)	missense	probably damaging	0.99
R7646:Slco3a1	UTSW	7	74,154,344 (GRCm39)	missense	probably damaging	1.00
R7798:Slco3a1	UTSW	7	73,968,344 (GRCm39)	missense	probably benign	0.00
R8024:Slco3a1	UTSW	7	74,204,218 (GRCm39)	missense	probably benign	0.24
R8128:Slco3a1	UTSW	7	73,934,049 (GRCm39)	missense	probably damaging	1.00
R8184:Slco3a1	UTSW	7	74,009,577 (GRCm39)	missense	probably benign	0.01
R8192:Slco3a1	UTSW	7	73,970,338 (GRCm39)	missense	probably benign	0.13
R8279:Slco3a1	UTSW	7	73,934,144 (GRCm39)	missense	possibly damaging	0.84
R8511:Slco3a1	UTSW	7	73,952,990 (GRCm39)	missense	probably benign	0.33
R8732:Slco3a1	UTSW	7	73,934,054 (GRCm39)	missense	possibly damaging	0.47
R8933:Slco3a1	UTSW	7	73,934,248 (GRCm39)	nonsense	probably null
R8987:Slco3a1	UTSW	7	73,970,324 (GRCm39)	missense	possibly damaging	0.92
R9138:Slco3a1	UTSW	7	74,009,664 (GRCm39)	missense	probably damaging	1.00
R9177:Slco3a1	UTSW	7	73,952,946 (GRCm39)	missense	probably benign	0.40
R9268:Slco3a1	UTSW	7	73,952,946 (GRCm39)	missense	probably benign	0.40
R9342:Slco3a1	UTSW	7	74,154,037 (GRCm39)	missense	probably damaging	1.00
R9347:Slco3a1	UTSW	7	73,934,153 (GRCm39)	missense	possibly damaging	0.89
R9422:Slco3a1	UTSW	7	73,946,996 (GRCm39)	missense	probably damaging	1.00
R9556:Slco3a1	UTSW	7	74,201,905 (GRCm39)	missense	probably benign	0.00
R9560:Slco3a1	UTSW	7	74,153,931 (GRCm39)	missense	probably damaging	1.00
R9709:Slco3a1	UTSW	7	73,952,957 (GRCm39)	missense	possibly damaging	0.62
X0017:Slco3a1	UTSW	7	73,934,108 (GRCm39)	missense	probably benign	0.03
Z1176:Slco3a1	UTSW	7	73,925,762 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- ACAGTTTCATGCCCACCTGC -3'
(R):5'- GAGCCTTCAACCTCTCTAGC -3'

Sequencing Primer
(F):5'- GCGGCATCTCCTTTCAGG -3'
(R):5'- TCAACCTCTCTAGCCGCGG -3'

Posted On

2022-03-25