Mutagenetix > Incidental Mutation

Incidental Mutation 'R9320:Siglecg'

706089

Institutional Source

Beutler Lab

Gene Symbol

Siglecg

Ensembl Gene

ENSMUSG00000030468

Gene Name

sialic acid binding Ig-like lectin G

Synonyms

A630096C01Rik, mSiglec-G

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.058) question?

Stock #

R9320 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

43057623-43067773 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 43058853 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Asparagine at position 202 (I202N)

Ref Sequence

ENSEMBL: ENSMUSP00000005592 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000005592]

AlphaFold

Q80ZE3

Predicted Effect

probably benign
Transcript: ENSMUST00000005592
AA Change: I202N

PolyPhen 2 Score 0.330 (Sensitivity: 0.90; Specificity: 0.89)

SMART Domains

Protein: ENSMUSP00000005592
Gene: ENSMUSG00000030468
AA Change: I202N

Domain	Start	End	E-Value	Type
signal peptide	1	17	N/A	INTRINSIC
IG	27	139	5.21e-2	SMART
IG_like	148	232	8.97e0	SMART
IGc2	262	325	3.38e-10	SMART
IGc2	366	427	8.26e-5	SMART
low complexity region	473	480	N/A	INTRINSIC
transmembrane domain	545	564	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.5%
20x: 98.2%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] SIGLECs are members of the immunoglobulin superfamily that are expressed on the cell surface. Most SIGLECs have 1 or more cytoplasmic immune receptor tyrosine-based inhibitory motifs, or ITIMs. SIGLECs are typically expressed on cells of the innate immune system, with the exception of the B-cell expressed SIGLEC6 (MIM 604405).[supplied by OMIM, Jul 2002]
PHENOTYPE: Mice homozygous for a null allele exhibit increased B-1 cell numbers, increased IgM levels and IgM-producing plasma cells, and produce more IgM autoantibodies. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 68 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca16	T	C	7: 120,139,320 (GRCm39)	Y1451H	probably damaging	Het
Abca7	T	A	10: 79,833,471 (GRCm39)	M8K	possibly damaging	Het
Ablim3	C	A	18: 61,972,805 (GRCm39)	R238L	probably damaging	Het
Adar	T	A	3: 89,658,368 (GRCm39)	Y1141*	probably null	Het
Arid2	T	C	15: 96,269,067 (GRCm39)	I1060T	probably damaging	Het
Armc2	A	T	10: 41,839,774 (GRCm39)	V397D	possibly damaging	Het
Astn2	A	G	4: 66,322,386 (GRCm39)	V71A	unknown	Het
Bcat2	A	G	7: 45,234,542 (GRCm39)	D141G	probably damaging	Het
Bicdl1	C	A	5: 115,862,769 (GRCm39)	R162L	probably damaging	Het
Btbd17	A	G	11: 114,684,910 (GRCm39)	I43T	possibly damaging	Het
C2cd5	A	T	6: 142,977,019 (GRCm39)	C698*	probably null	Het
Calr	T	A	8: 85,572,629 (GRCm39)	K87*	probably null	Het
Cap2	C	T	13: 46,768,818 (GRCm39)	T208I	probably benign	Het
Col14a1	A	T	15: 55,364,780 (GRCm39)	M1630L	probably benign	Het
Copg1	T	G	6: 87,887,072 (GRCm39)	S816A	possibly damaging	Het
Csf2ra	C	A	19: 61,215,280 (GRCm39)	A112S	possibly damaging	Het
Cwc27	T	A	13: 104,933,799 (GRCm39)	H241L	probably benign	Het
Dgki	T	A	6: 36,892,422 (GRCm39)	E852V	probably damaging	Het
Dpp6	T	C	5: 27,868,521 (GRCm39)		probably null	Het
Dynlrb1	T	C	2: 155,089,860 (GRCm39)		probably null	Het
Ehhadh	C	T	16: 21,592,281 (GRCm39)	V141I	probably benign	Het
Esyt3	A	G	9: 99,194,044 (GRCm39)	L865P	probably damaging	Het
Fam83h	T	A	15: 75,873,924 (GRCm39)	T1138S	possibly damaging	Het
Fzd4	T	C	7: 89,056,912 (GRCm39)	W320R	probably damaging	Het
Gimap7	A	T	6: 48,701,260 (GRCm39)	K282M	probably benign	Het
Gnai2	G	A	9: 107,492,913 (GRCm39)	T330I		Het
Gpr107	T	C	2: 31,078,728 (GRCm39)	S388P	possibly damaging	Het
Il1a	T	G	2: 129,142,654 (GRCm39)	M264L	probably benign	Het
Ints10	A	T	8: 69,279,951 (GRCm39)	I693F	probably damaging	Het
Jak3	A	T	8: 72,134,265 (GRCm39)	N456Y	probably benign	Het
Krcc1	A	G	6: 71,261,457 (GRCm39)	E163G	probably benign	Het
Lctl	A	G	9: 64,040,455 (GRCm39)	Y466C	probably damaging	Het
Lrp12	A	T	15: 39,741,357 (GRCm39)	S472T	probably damaging	Het
Lrp1b	A	G	2: 41,335,111 (GRCm39)		probably null	Het
Lrriq1	T	A	10: 103,057,144 (GRCm39)	M219L	probably benign	Het
Mbl2	T	A	19: 30,216,741 (GRCm39)	D184E	probably damaging	Het
Mrgpra9	G	A	7: 46,885,392 (GRCm39)	R92C	probably benign	Het
Mroh4	G	A	15: 74,483,405 (GRCm39)	T644I	probably damaging	Het
Muc5ac	C	T	7: 141,369,255 (GRCm39)	A3114V	probably benign	Het
Myh11	T	A	16: 14,029,152 (GRCm39)	M1197L		Het
Naga	C	T	15: 82,221,084 (GRCm39)	G71S	probably damaging	Het
Nicn1	C	T	9: 108,171,708 (GRCm39)	R163C	possibly damaging	Het
Nos1	G	C	5: 118,017,402 (GRCm39)	R255P	probably benign	Het
Nsd3	A	G	8: 26,199,088 (GRCm39)		probably null	Het
Nsun6	T	C	2: 15,047,048 (GRCm39)	T101A	probably benign	Het
Or55b10	T	A	7: 102,144,084 (GRCm39)		probably benign	Het
Pabpc4l	T	A	3: 46,401,326 (GRCm39)	D106V	probably damaging	Het
Pdlim5	G	A	3: 141,953,109 (GRCm39)	P529L	probably damaging	Het
Ralgapa1	A	G	12: 55,755,843 (GRCm39)	L1111P	possibly damaging	Het
Rangap1	T	C	15: 81,606,221 (GRCm39)	D40G	probably benign	Het
Ripor2	T	C	13: 24,915,663 (GRCm39)	F1078L	probably damaging	Het
Ryr3	T	C	2: 112,610,336 (GRCm39)	D2312G	probably damaging	Het
Slco4c1	G	T	1: 96,795,644 (GRCm39)	S138*	probably null	Het
Snx27	T	C	3: 94,431,593 (GRCm39)	Y267C	probably damaging	Het
Sphk2	C	T	7: 45,361,179 (GRCm39)	R275H	probably damaging	Het
Stk36	T	A	1: 74,655,793 (GRCm39)	V432E	possibly damaging	Het
Tecrl	C	T	5: 83,428,422 (GRCm39)	S283N	possibly damaging	Het
Tenm2	T	A	11: 35,914,474 (GRCm39)	E2354D	probably damaging	Het
Tmem59l	A	G	8: 70,937,822 (GRCm39)	V186A	possibly damaging	Het
Try4	T	C	6: 41,282,008 (GRCm39)		probably null	Het
Ubr1	C	A	2: 120,727,000 (GRCm39)	G1248V	probably benign	Het
Umod	C	T	7: 119,065,355 (GRCm39)	G558E	probably damaging	Het
Unc13b	T	C	4: 43,171,044 (GRCm39)	F624S	unknown	Het
Uvssa	T	G	5: 33,547,365 (GRCm39)	D310E	probably benign	Het
Vmn1r222	A	T	13: 23,416,418 (GRCm39)	M265K	probably benign	Het
Vmn1r3	A	G	4: 3,185,284 (GRCm39)	F8L	probably benign	Het
Zfp268	C	G	4: 145,349,156 (GRCm39)	Q198E	possibly damaging	Het
Zfp386	T	A	12: 116,023,517 (GRCm39)	C412S	probably damaging	Het

Other mutations in Siglecg

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00528:Siglecg	APN	7	43,058,481 (GRCm39)	missense	possibly damaging	0.64
IGL00556:Siglecg	APN	7	43,061,219 (GRCm39)	missense	probably benign	0.02
IGL01806:Siglecg	APN	7	43,060,888 (GRCm39)	splice site	probably null
IGL01947:Siglecg	APN	7	43,058,187 (GRCm39)	missense	probably benign	0.43
IGL02257:Siglecg	APN	7	43,061,328 (GRCm39)	missense	probably benign	0.00
IGL02410:Siglecg	APN	7	43,058,253 (GRCm39)	missense	probably damaging	0.99
IGL02454:Siglecg	APN	7	43,058,319 (GRCm39)	missense	probably benign	0.00
Chamonix	UTSW	7	43,058,846 (GRCm39)	missense	possibly damaging	0.91
Dollywood	UTSW	7	43,060,523 (GRCm39)	missense	probably damaging	1.00
glowworm	UTSW	7	43,058,003 (GRCm39)	missense	probably benign	0.04
Montblanc	UTSW	7	43,060,810 (GRCm39)	intron	probably benign
Shenandoah	UTSW	7	43,058,226 (GRCm39)	missense	probably damaging	0.99
shenandoah2	UTSW	7	43,061,441 (GRCm39)	missense	possibly damaging	0.82
Sherando	UTSW	7	43,058,481 (GRCm39)	missense	possibly damaging	0.64
Smokies	UTSW	7	43,058,703 (GRCm39)	missense	probably benign	0.02
IGL02988:Siglecg	UTSW	7	43,067,476 (GRCm39)	missense	probably damaging	1.00
R0134:Siglecg	UTSW	7	43,060,595 (GRCm39)	missense	probably damaging	1.00
R0225:Siglecg	UTSW	7	43,060,595 (GRCm39)	missense	probably damaging	1.00
R0480:Siglecg	UTSW	7	43,060,550 (GRCm39)	missense	probably benign	0.42
R1538:Siglecg	UTSW	7	43,067,313 (GRCm39)	missense	possibly damaging	0.53
R1681:Siglecg	UTSW	7	43,058,365 (GRCm39)	missense	probably benign	0.17
R2358:Siglecg	UTSW	7	43,058,846 (GRCm39)	missense	possibly damaging	0.91
R4428:Siglecg	UTSW	7	43,067,350 (GRCm39)	missense	possibly damaging	0.84
R4429:Siglecg	UTSW	7	43,067,350 (GRCm39)	missense	possibly damaging	0.84
R4736:Siglecg	UTSW	7	43,067,332 (GRCm39)	missense	probably benign	0.03
R4754:Siglecg	UTSW	7	43,061,295 (GRCm39)	intron	probably benign
R5017:Siglecg	UTSW	7	43,060,810 (GRCm39)	intron	probably benign
R5713:Siglecg	UTSW	7	43,058,226 (GRCm39)	missense	probably damaging	0.99
R5777:Siglecg	UTSW	7	43,058,837 (GRCm39)	missense	possibly damaging	0.80
R5892:Siglecg	UTSW	7	43,061,628 (GRCm39)	intron	probably benign
R6153:Siglecg	UTSW	7	43,061,441 (GRCm39)	missense	possibly damaging	0.82
R6154:Siglecg	UTSW	7	43,061,441 (GRCm39)	missense	possibly damaging	0.82
R6331:Siglecg	UTSW	7	43,058,178 (GRCm39)	missense	possibly damaging	0.83
R6562:Siglecg	UTSW	7	43,058,481 (GRCm39)	missense	possibly damaging	0.64
R6749:Siglecg	UTSW	7	43,058,403 (GRCm39)	missense	probably benign	0.00
R7066:Siglecg	UTSW	7	43,061,166 (GRCm39)	missense	probably benign	0.40
R7884:Siglecg	UTSW	7	43,058,703 (GRCm39)	missense	probably benign	0.02
R8275:Siglecg	UTSW	7	43,061,892 (GRCm39)	missense	probably benign
R8554:Siglecg	UTSW	7	43,058,320 (GRCm39)	missense	probably benign	0.01
R8846:Siglecg	UTSW	7	43,061,942 (GRCm39)	missense	probably benign	0.02
R8873:Siglecg	UTSW	7	43,067,448 (GRCm39)	missense	probably benign	0.00
R8887:Siglecg	UTSW	7	43,058,008 (GRCm39)	missense	probably benign	0.18
R9012:Siglecg	UTSW	7	43,060,523 (GRCm39)	missense	probably damaging	1.00
R9032:Siglecg	UTSW	7	43,061,049 (GRCm39)	missense	probably benign	0.24
R9048:Siglecg	UTSW	7	43,058,003 (GRCm39)	missense	probably benign	0.04
R9085:Siglecg	UTSW	7	43,061,049 (GRCm39)	missense	probably benign	0.24
R9313:Siglecg	UTSW	7	43,061,856 (GRCm39)	missense	probably benign	0.03
R9745:Siglecg	UTSW	7	43,067,476 (GRCm39)	missense	probably damaging	0.98
RF006:Siglecg	UTSW	7	43,058,288 (GRCm39)	nonsense	probably null
Z1177:Siglecg	UTSW	7	43,061,446 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TTAGCCCTGACTCAGAAGCC -3'
(R):5'- GTGTGTCAAACTCTTTATCAGCCTAC -3'

Sequencing Primer
(F):5'- GAAGCCAGATATCTTCATTCCTGAGG -3'
(R):5'- TTGGAGTATAGATGTGCAACCACC -3'

Posted On

2022-03-25