Incidental Mutation 'R9350:Arhgap19'
ID 708046
Institutional Source Beutler Lab
Gene Symbol Arhgap19
Ensembl Gene ENSMUSG00000025154
Gene Name Rho GTPase activating protein 19
Synonyms 4933411B03Rik
MMRRC Submission
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R9350 (G1)
Quality Score 225.009
Status Not validated
Chromosome 19
Chromosomal Location 41755027-41790486 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 41761566 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Tyrosine at position 466 (F466Y)
Ref Sequence ENSEMBL: ENSMUSP00000026150 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000026150] [ENSMUST00000163265] [ENSMUST00000177495]
AlphaFold Q8BRH3
Predicted Effect probably benign
Transcript: ENSMUST00000026150
AA Change: F466Y

PolyPhen 2 Score 0.117 (Sensitivity: 0.93; Specificity: 0.86)
SMART Domains Protein: ENSMUSP00000026150
Gene: ENSMUSG00000025154
AA Change: F466Y

DomainStartEndE-ValueType
low complexity region 88 96 N/A INTRINSIC
RhoGAP 119 305 8.26e-41 SMART
low complexity region 361 371 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000163265
SMART Domains Protein: ENSMUSP00000129586
Gene: ENSMUSG00000025154

DomainStartEndE-ValueType
low complexity region 88 96 N/A INTRINSIC
RhoGAP 119 305 8.26e-41 SMART
low complexity region 361 371 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000176266
SMART Domains Protein: ENSMUSP00000134829
Gene: ENSMUSG00000025154

DomainStartEndE-ValueType
Blast:RhoGAP 2 120 2e-50 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000177495
AA Change: F451Y

PolyPhen 2 Score 0.186 (Sensitivity: 0.92; Specificity: 0.87)
SMART Domains Protein: ENSMUSP00000135293
Gene: ENSMUSG00000025154
AA Change: F451Y

DomainStartEndE-ValueType
low complexity region 88 96 N/A INTRINSIC
RhoGAP 119 305 8.26e-41 SMART
low complexity region 346 356 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 98.7%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Members of the ARHGAP family, such as ARHGAP19, encode negative regulators of Rho GTPases (see RHOA; MIM 165390), which are involved in cell migration, proliferation, and differentiation, actin remodeling, and G1 cell cycle progression (Lv et al., 2007 [PubMed 17454002]).[supplied by OMIM, Mar 2008]
PHENOTYPE: Mice homozygous for a gene trap allele are viable with no obvious abnormalities. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 61 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam26a T A 8: 44,022,669 (GRCm39) M274L probably benign Het
Adarb1 T A 10: 77,158,267 (GRCm39) N60I possibly damaging Het
Adgrv1 T A 13: 81,654,274 (GRCm39) N2919I probably damaging Het
Adora3 C T 3: 105,814,613 (GRCm39) T121M possibly damaging Het
Aoc1l3 A T 6: 48,965,260 (GRCm39) N423Y probably damaging Het
Arih2 C G 9: 108,488,938 (GRCm39) R260P probably damaging Het
Atxn7l1 C T 12: 33,417,315 (GRCm39) T492I probably benign Het
B3galnt2 T C 13: 14,170,393 (GRCm39) S248P probably damaging Het
Casp2 T C 6: 42,246,332 (GRCm39) V230A probably benign Het
Creb3l1 C T 2: 91,822,231 (GRCm39) probably null Het
Ctnnbl1 G A 2: 157,651,445 (GRCm39) G240E possibly damaging Het
Dennd2c T C 3: 103,039,308 (GRCm39) L152P possibly damaging Het
Dhx16 T A 17: 36,200,203 (GRCm39) F874Y probably damaging Het
Dnah14 A T 1: 181,562,369 (GRCm39) Y2643F possibly damaging Het
Dnah2 C A 11: 69,384,073 (GRCm39) V1048L probably benign Het
Dnah7a T C 1: 53,436,307 (GRCm39) I4012V probably benign Het
Duox2 G A 2: 122,115,729 (GRCm39) R1002* probably null Het
Ears2 T A 7: 121,643,786 (GRCm39) K391* probably null Het
Eif4e T C 3: 138,259,470 (GRCm39) V176A probably benign Het
Erbb4 T A 1: 68,329,638 (GRCm39) I626L probably benign Het
Fam171a1 C T 2: 3,226,037 (GRCm39) T390I probably benign Het
Fam187b A G 7: 30,677,037 (GRCm39) E182G possibly damaging Het
Fam204a A G 19: 60,209,685 (GRCm39) V15A probably benign Het
Fscn3 C T 6: 28,430,432 (GRCm39) R201* probably null Het
Fzd6 A G 15: 38,895,043 (GRCm39) D403G probably damaging Het
Gars1 G A 6: 55,029,249 (GRCm39) A210T probably null Het
Gmcl1 A T 6: 86,677,569 (GRCm39) I428N probably damaging Het
Gmip T A 8: 70,263,832 (GRCm39) I92N probably damaging Het
Il17rc G A 6: 113,456,048 (GRCm39) V298I probably damaging Het
Kifap3 A G 1: 163,610,630 (GRCm39) I37V probably benign Het
Marf1 T C 16: 13,963,789 (GRCm39) K505E probably damaging Het
Masp2 A T 4: 148,692,396 (GRCm39) probably null Het
Mmp15 G A 8: 96,093,002 (GRCm39) R127H probably damaging Het
Nrdc A G 4: 108,889,658 (GRCm39) T402A possibly damaging Het
Or10d1c A T 9: 38,894,081 (GRCm39) N86K probably benign Het
Or4k6 T A 14: 50,475,407 (GRCm39) I312L probably benign Het
Papln A T 12: 83,833,638 (GRCm39) I1185F probably damaging Het
Pcdhgb1 A G 18: 37,814,705 (GRCm39) N399D probably benign Het
Pcdhgb6 T A 18: 37,876,872 (GRCm39) S527T probably benign Het
Phkb T A 8: 86,743,493 (GRCm39) Y530* probably null Het
Pira2 A G 7: 3,844,030 (GRCm39) S581P probably benign Het
Pou4f3 A T 18: 42,528,329 (GRCm39) T91S probably benign Het
Prpf38a A G 4: 108,424,112 (GRCm39) S296P unknown Het
Rnf213 T C 11: 119,332,975 (GRCm39) V2729A Het
Rtl1 G A 12: 109,557,226 (GRCm39) Q1538* probably null Het
Sars2 T C 7: 28,447,273 (GRCm39) S224P probably damaging Het
Senp8 A G 9: 59,645,105 (GRCm39) V17A probably benign Het
Serpinb13 T A 1: 106,923,562 (GRCm39) L89* probably null Het
Sh3bp2 T A 5: 34,718,453 (GRCm39) probably null Het
Shank2 A G 7: 143,960,945 (GRCm39) T254A probably benign Het
Smdt1 A T 15: 82,231,504 (GRCm39) E12D probably benign Het
Sp110 G A 1: 85,506,813 (GRCm39) R417C probably benign Het
Taar2 A G 10: 23,817,345 (GRCm39) N295S probably damaging Het
Trim24 A G 6: 37,892,208 (GRCm39) Q247R probably damaging Het
Trpc4 T A 3: 54,209,610 (GRCm39) N658K probably damaging Het
Ube2e1 T C 14: 18,284,348 (GRCm38) D137G probably damaging Het
Ubn1 T A 16: 4,899,422 (GRCm39) H1055Q probably benign Het
Vmn1r235 A G 17: 21,482,190 (GRCm39) T172A probably benign Het
Vps13d A G 4: 144,882,333 (GRCm39) F1087L Het
Xirp2 T C 2: 67,349,653 (GRCm39) S3283P probably damaging Het
Zeb2 C A 2: 44,887,158 (GRCm39) S633I possibly damaging Het
Other mutations in Arhgap19
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01866:Arhgap19 APN 19 41,775,016 (GRCm39) missense probably benign 0.09
IGL03005:Arhgap19 APN 19 41,772,856 (GRCm39) splice site probably benign
IGL03077:Arhgap19 APN 19 41,769,760 (GRCm39) missense probably benign 0.01
R0367:Arhgap19 UTSW 19 41,790,417 (GRCm39) missense probably benign 0.00
R0380:Arhgap19 UTSW 19 41,761,576 (GRCm39) splice site probably benign
R0755:Arhgap19 UTSW 19 41,769,614 (GRCm39) missense probably damaging 1.00
R1622:Arhgap19 UTSW 19 41,790,412 (GRCm39) missense probably benign 0.01
R1738:Arhgap19 UTSW 19 41,772,820 (GRCm39) missense probably benign
R1858:Arhgap19 UTSW 19 41,767,592 (GRCm39) missense probably benign 0.10
R1980:Arhgap19 UTSW 19 41,776,784 (GRCm39) missense possibly damaging 0.65
R3749:Arhgap19 UTSW 19 41,762,518 (GRCm39) missense probably damaging 1.00
R4951:Arhgap19 UTSW 19 41,762,545 (GRCm39) missense probably benign 0.00
R5552:Arhgap19 UTSW 19 41,772,819 (GRCm39) missense probably benign 0.06
R5711:Arhgap19 UTSW 19 41,773,227 (GRCm39) missense possibly damaging 0.91
R6500:Arhgap19 UTSW 19 41,775,077 (GRCm39) missense probably damaging 1.00
R7476:Arhgap19 UTSW 19 41,770,802 (GRCm39) missense probably benign 0.09
R8356:Arhgap19 UTSW 19 41,762,615 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TACCACCTTAGACGTCACAAATGG -3'
(R):5'- TGGTAGCTGTCAACAAGTGC -3'

Sequencing Primer
(F):5'- GTCACAAATGGAAAACACTGCTG -3'
(R):5'- GGTCGGTTAAGTCTCACTAGAAATGC -3'
Posted On 2022-04-18