Mutagenetix > Incidental Mutation

Incidental Mutation 'R9389:Myg1'

710508

Institutional Source

Beutler Lab

Gene Symbol

Myg1

Ensembl Gene

ENSMUSG00000001285

Gene Name

melanocyte proliferating gene 1

Synonyms

Gamm1

MMRRC Submission

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.290) question?

Stock #

R9389 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

102331709-102338139 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

G to T at 102336937 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Valine to Phenylalanine at position 198 (V198F)

Ref Sequence

ENSEMBL: ENSMUSP00000109312 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000001331] [ENSMUST00000041208] [ENSMUST00000113682] [ENSMUST00000228959] [ENSMUST00000229900] [ENSMUST00000230481] [ENSMUST00000231061]

AlphaFold

Q9JK81

Predicted Effect

probably benign
Transcript: ENSMUST00000001331

SMART Domains

Protein: ENSMUSP00000001331
Gene: ENSMUSG00000001285

Domain	Start	End	E-Value	Type
Pfam:UPF0160	41	161	4.8e-54	PFAM
Pfam:UPF0160	158	312	1.3e-59	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000041208

SMART Domains

Protein: ENSMUSP00000044604
Gene: ENSMUSG00000036678

Domain	Start	End	E-Value	Type
WD40	136	179	3.7e0	SMART
WD40	181	221	4.75e1	SMART
WD40	232	273	1.17e-5	SMART
WD40	278	315	2.66e0	SMART
Blast:WD40	319	357	2e-15	BLAST
low complexity region	534	545	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000113682
AA Change: V198F

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000109312
Gene: ENSMUSG00000001285
AA Change: V198F

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
Pfam:UPF0160	45	365	1.5e-143	PFAM

Predicted Effect

SMART Domains

Protein: ENSMUSP00000129494
Gene: ENSMUSG00000001285
AA Change: V193F

Domain	Start	End	E-Value	Type
Pfam:UPF0160	41	209	1.7e-76	PFAM
Pfam:UPF0160	204	306	3.3e-43	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000228959

Predicted Effect

probably benign
Transcript: ENSMUST00000229900

Predicted Effect

probably benign
Transcript: ENSMUST00000230239

Predicted Effect

probably benign
Transcript: ENSMUST00000230406

Predicted Effect

probably benign
Transcript: ENSMUST00000230481

Predicted Effect

probably benign
Transcript: ENSMUST00000231061

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.0%

Validation Efficiency

100% (55/55)

MGI Phenotype

PHENOTYPE: Mice homozygous for a null mutation display no gross abnormalities but altered sex-dependent anxiety-like behaviors in different tests. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 56 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2210010C04Rik	C	T	6: 41,033,145	G85D	probably benign	Het
4931440F15Rik	A	G	11: 29,825,107	S117P	probably damaging	Het
Abcb1b	G	A	5: 8,825,614	V596I	probably benign	Het
Agtpbp1	A	T	13: 59,466,070	M1019K	probably damaging	Het
Arfgef3	A	G	10: 18,603,523	V1448A	probably damaging	Het
Baz1a	T	A	12: 54,916,823	E828D	probably damaging	Het
Ces1f	A	T	8: 93,269,972		probably null	Het
Cfap53	T	A	18: 74,299,343		probably null	Het
Col6a4	T	C	9: 106,000,784	Y1998C	probably damaging	Het
Col9a2	A	G	4: 121,054,751	T675A	probably benign	Het
Dusp6	G	A	10: 99,263,977	V96M	possibly damaging	Het
Elmo1	T	G	13: 20,185,491	M22R	probably benign	Het
Gm19965	A	G	1: 116,821,836	N416D		Het
Gpr162	A	G	6: 124,861,394	Y98H	probably damaging	Het
Igfals	G	A	17: 24,881,626	V564I	probably benign	Het
Il4	C	T	11: 53,614,010	R76H	probably damaging	Het
Itgb1	T	A	8: 128,707,156	N50K	probably benign	Het
Itpr3	A	T	17: 27,095,925	Y682F	possibly damaging	Het
Jak3	C	T	8: 71,684,052	P668S	probably damaging	Het
Malrd1	A	T	2: 15,703,156	N932I	unknown	Het
Mast4	C	A	13: 103,333,930	R88L	probably benign	Het
Mfsd11	T	G	11: 116,873,335	S381A	probably benign	Het
Mrm3	A	G	11: 76,250,030	D288G	probably damaging	Het
Naip5	T	A	13: 100,219,830	E1092D	probably benign	Het
Npy6r	T	C	18: 44,275,692	I60T	probably damaging	Het
Olfr1109	A	T	2: 87,093,046	M117K	possibly damaging	Het
Olfr1308	G	T	2: 111,960,527	P182H	probably damaging	Het
Olfr1341	A	T	4: 118,710,156	M250L	probably benign	Het
Olfr177	C	T	16: 58,872,613	C179Y	probably damaging	Het
Olfr530	T	C	7: 140,373,017	T198A	probably benign	Het
Olfr811	G	A	10: 129,801,671	P285S	probably damaging	Het
Ovgp1	CCACTGGTGTTTCTAAGACCACCACTGGCATTTCTAAGACCATCACTGGTGTTTCTAAGACCACCACTGGCATTTCTAAGACCACCACTGGCATTTCTAAGACCACCACTGGGGTTTCTAAGATCACCACTGGTGTTTCTAAGACCACCACTGGCATTTCTAAGACCA	CCACTGGTGTTTCTAAGACCACCACTGGCATTTCTAAGACCACCACTGGCATTTCTAAGACCACCACTGGGGTTTCTAAGATCACCACTGGTGTTTCTAAGACCACCACTGGCATTTCTAAGACCA	3: 105,986,525		probably benign	Het
Oxtr	C	A	6: 112,489,349	R150L	probably damaging	Het
Pappa	A	T	4: 65,180,888	Y548F	probably damaging	Het
Pip4k2a	T	C	2: 18,908,079	K73R	probably damaging	Het
Pla2g4f	T	A	2: 120,302,300	D685V	probably damaging	Het
Ppp1r35	T	A	5: 137,779,315	L81Q	probably damaging	Het
Ptprf	C	A	4: 118,236,039	A469S	probably benign	Het
Ranbp3l	T	A	15: 9,057,223	N322K	probably damaging	Het
Rev3l	T	A	10: 39,822,971	Y1155N	possibly damaging	Het
Rfesd	T	C	13: 76,003,012	Y96C	probably damaging	Het
Runx1	C	T	16: 92,613,680	V283I	possibly damaging	Het
Sema5b	A	C	16: 35,645,722	Q125P	probably damaging	Het
Spef2	A	T	15: 9,725,221	M150K	probably damaging	Het
Srcap	T	G	7: 127,542,283	L1745W	probably damaging	Het
Srgap2	A	G	1: 131,355,627	Y239H	probably damaging	Het
Svil	T	A	18: 5,090,811	H1304Q	possibly damaging	Het
Syne1	T	C	10: 5,229,193	D4427G	possibly damaging	Het
Tg	T	A	15: 66,689,324	M1065K	probably benign	Het
Tgm2	T	C	2: 158,117,896	T656A	probably benign	Het
Ttc37	A	G	13: 76,127,039	D403G	probably benign	Het
Ubr4	A	G	4: 139,425,924	K809E		Het
Vmn1r88	T	C	7: 13,178,619	S301P	probably damaging	Het
Wdr27	A	G	17: 14,891,718	V671A	possibly damaging	Het
Zbtb17	G	A	4: 141,465,820	V550I	possibly damaging	Het
Zeb2	A	T	2: 44,997,908	I379N	probably damaging	Het

Other mutations in Myg1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01369:Myg1	APN	15	102334338	missense	probably benign	0.00
IGL02188:Myg1	APN	15	102337441	missense	probably benign	0.08
IGL02373:Myg1	APN	15	102336833	missense	probably damaging	0.99
IGL02885:Myg1	APN	15	102332159	missense	probably damaging	1.00
IGL03066:Myg1	APN	15	102334366	unclassified	probably benign
R0583:Myg1	UTSW	15	102337790	nonsense	probably null
R0631:Myg1	UTSW	15	102331849	missense	probably benign	0.00
R0835:Myg1	UTSW	15	102332102	missense	probably damaging	1.00
R1016:Myg1	UTSW	15	102334351	missense	possibly damaging	0.50
R1466:Myg1	UTSW	15	102337390	missense	probably damaging	1.00
R1466:Myg1	UTSW	15	102337390	missense	probably damaging	1.00
R1757:Myg1	UTSW	15	102331829	missense	probably benign
R2400:Myg1	UTSW	15	102337736	missense	probably damaging	1.00
R2428:Myg1	UTSW	15	102337736	missense	probably damaging	1.00
R2429:Myg1	UTSW	15	102337736	missense	probably damaging	1.00
R2431:Myg1	UTSW	15	102337736	missense	probably damaging	1.00
R2997:Myg1	UTSW	15	102337510	missense	probably null	1.00
R3683:Myg1	UTSW	15	102337736	missense	probably damaging	1.00
R3826:Myg1	UTSW	15	102337736	missense	probably damaging	1.00
R3827:Myg1	UTSW	15	102337736	missense	probably damaging	1.00
R3829:Myg1	UTSW	15	102337736	missense	probably damaging	1.00
R4923:Myg1	UTSW	15	102331853	missense	probably benign
R5363:Myg1	UTSW	15	102337824	missense	probably benign	0.00
R5419:Myg1	UTSW	15	102336962	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- TTTGTCAAACACCGAGGGC -3'
(R):5'- GCAGAAACTCCTCTTGTACCAG -3'

Sequencing Primer
(F):5'- CACCGAGGGCAGATGTG -3'
(R):5'- AGGTCCATTGCTCGCCTGAAC -3'

Posted On

2022-04-18