Incidental Mutation 'R9401:Wdr90'
ID 711253
Institutional Source Beutler Lab
Gene Symbol Wdr90
Ensembl Gene ENSMUSG00000073434
Gene Name WD repeat domain 90
Synonyms 3230401M21Rik
MMRRC Submission
Accession Numbers
Essential gene? Probably non essential (E-score: 0.107) question?
Stock # R9401 (G1)
Quality Score 217.468
Status Not validated
Chromosome 17
Chromosomal Location 26063745-26080475 bp(-) (GRCm39)
Type of Mutation small insertion (1 aa in frame mutation)
DNA Base Change (assembly) AGAC to AGACGAC at 26064750 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000135420 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000043897] [ENSMUST00000079461] [ENSMUST00000176709] [ENSMUST00000176923]
AlphaFold Q6ZPG2
Predicted Effect probably benign
Transcript: ENSMUST00000043897
SMART Domains Protein: ENSMUSP00000044639
Gene: ENSMUSG00000025733

DomainStartEndE-ValueType
Pfam:Roc 6 122 4.1e-11 PFAM
Pfam:Ras 6 168 2.3e-18 PFAM
EFh 188 216 1.27e1 SMART
Pfam:EF_assoc_2 219 305 2.2e-35 PFAM
EFh 308 336 1.23e-1 SMART
Pfam:EF_assoc_1 341 412 1.8e-25 PFAM
Blast:AAA 416 547 7e-18 BLAST
SCOP:d1mh1__ 422 532 4e-8 SMART
transmembrane domain 595 617 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000079461
SMART Domains Protein: ENSMUSP00000078426
Gene: ENSMUSG00000073434

DomainStartEndE-ValueType
low complexity region 32 53 N/A INTRINSIC
Pfam:DUF667 60 183 5e-26 PFAM
Pfam:DUF667 210 271 3.7e-9 PFAM
low complexity region 381 396 N/A INTRINSIC
WD40 478 519 5.94e0 SMART
WD40 522 565 3.2e0 SMART
WD40 572 612 3.3e1 SMART
WD40 687 725 1.15e1 SMART
WD40 728 766 5.75e-1 SMART
WD40 768 808 9.24e-4 SMART
WD40 811 850 4.13e0 SMART
WD40 853 892 4.62e-1 SMART
WD40 950 993 1.07e1 SMART
WD40 996 1035 5.75e-1 SMART
WD40 1040 1077 1.58e-2 SMART
WD40 1290 1334 5.23e-3 SMART
WD40 1337 1378 1.27e-1 SMART
WD40 1384 1419 1.83e2 SMART
WD40 1422 1469 3.08e0 SMART
WD40 1472 1509 9.9e0 SMART
WD40 1568 1607 9.02e-7 SMART
WD40 1610 1655 5.75e-1 SMART
WD40 1659 1697 2.98e-1 SMART
WD40 1700 1749 6.14e1 SMART
WD40 1850 1888 1.92e-1 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000176591
Predicted Effect probably benign
Transcript: ENSMUST00000176709
SMART Domains Protein: ENSMUSP00000135436
Gene: ENSMUSG00000025733

DomainStartEndE-ValueType
Pfam:Arf 1 121 1.6e-6 PFAM
Pfam:MMR_HSR1 6 118 1.4e-6 PFAM
Pfam:Miro 6 120 7.8e-20 PFAM
Pfam:Ras 6 121 7.2e-16 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000176751
Predicted Effect probably benign
Transcript: ENSMUST00000176923
SMART Domains Protein: ENSMUSP00000135420
Gene: ENSMUSG00000073434

DomainStartEndE-ValueType
low complexity region 32 53 N/A INTRINSIC
Pfam:DUF667 60 252 5.1e-14 PFAM
low complexity region 363 378 N/A INTRINSIC
WD40 460 501 5.94e0 SMART
WD40 504 547 3.2e0 SMART
WD40 554 594 3.3e1 SMART
WD40 669 707 1.15e1 SMART
WD40 710 748 5.75e-1 SMART
WD40 750 790 9.24e-4 SMART
WD40 793 832 4.13e0 SMART
WD40 835 874 4.62e-1 SMART
WD40 932 975 1.07e1 SMART
WD40 978 1017 5.75e-1 SMART
WD40 1022 1059 1.58e-2 SMART
WD40 1272 1316 5.23e-3 SMART
WD40 1319 1360 1.27e-1 SMART
WD40 1366 1401 1.83e2 SMART
WD40 1404 1451 3.08e0 SMART
WD40 1454 1491 9.9e0 SMART
WD40 1550 1589 9.02e-7 SMART
WD40 1592 1637 5.75e-1 SMART
WD40 1641 1679 2.98e-1 SMART
WD40 1682 1731 6.14e1 SMART
WD40 1832 1870 1.92e-1 SMART
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 99.0%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 74 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aars1 A G 8: 111,780,785 (GRCm39) D850G probably benign Het
Abcc9 T A 6: 142,543,836 (GRCm39) T1480S possibly damaging Het
Adgrb3 C A 1: 25,592,783 (GRCm39) V335F probably damaging Het
Agfg1 C A 1: 82,859,958 (GRCm39) A275D probably benign Het
Alms1 T A 6: 85,655,001 (GRCm39) C2713* probably null Het
Atp8a1 G A 5: 67,906,492 (GRCm39) A474V Het
Baz1a C A 12: 54,963,339 (GRCm39) S918I probably damaging Het
Bcl2l12 G T 7: 44,643,674 (GRCm39) T120K possibly damaging Het
Bcl6 G T 16: 23,791,107 (GRCm39) Q416K possibly damaging Het
Cdhr1 T A 14: 36,820,055 (GRCm39) I16F probably benign Het
Celsr1 G T 15: 85,917,286 (GRCm39) S229* probably null Het
Cilp T C 9: 65,185,381 (GRCm39) V492A probably damaging Het
Crim1 CCGC CC 17: 78,658,294 (GRCm39) probably null Het
Crppa T C 12: 36,552,073 (GRCm39) V309A probably benign Het
Ctcfl T G 2: 172,947,881 (GRCm39) T479P probably damaging Het
Dlx6 A C 6: 6,863,581 (GRCm39) M68L probably benign Het
Dnah7a C A 1: 53,568,026 (GRCm39) V1857F probably benign Het
Dpy19l4 A G 4: 11,265,806 (GRCm39) V714A probably benign Het
Elovl7 T A 13: 108,419,188 (GRCm39) N273K probably benign Het
Fbxo22 A G 9: 55,130,628 (GRCm39) K299R probably benign Het
Fig4 A G 10: 41,143,733 (GRCm39) V242A probably benign Het
Fmo9 A T 1: 166,505,189 (GRCm39) M68K probably damaging Het
Fry T A 5: 150,302,403 (GRCm39) Y537N probably damaging Het
Fryl C T 5: 73,222,563 (GRCm39) W2006* probably null Het
Fzd8 T A 18: 9,213,205 (GRCm39) C96S possibly damaging Het
Gm40460 ACCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAG ACCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAG 7: 141,794,450 (GRCm39) probably benign Het
Gspt1 T C 16: 11,050,535 (GRCm39) D272G possibly damaging Het
Gzmf A T 14: 56,448,813 (GRCm39) M1K probably null Het
Hipk1 T C 3: 103,685,295 (GRCm39) T107A probably benign Het
Hsd3b9 T G 3: 98,363,819 (GRCm39) T9P probably damaging Het
Ighe C T 12: 113,233,107 (GRCm39) C438Y Het
Igkv4-50 T A 6: 69,677,967 (GRCm39) R46W Het
Igsf3 T A 3: 101,333,075 (GRCm39) Y118N probably damaging Het
Itsn1 T A 16: 91,612,408 (GRCm39) Y266N probably damaging Het
Jph3 A G 8: 122,511,854 (GRCm39) E614G probably damaging Het
Klk1b8 T A 7: 43,603,674 (GRCm39) D170E probably benign Het
Ly6e A T 15: 74,830,153 (GRCm39) K36* probably null Het
Map3k6 C A 4: 132,968,467 (GRCm39) A23E probably damaging Het
Med13l T A 5: 118,883,089 (GRCm39) M1316K probably benign Het
Or5c1 T C 2: 37,222,293 (GRCm39) V178A possibly damaging Het
Or6c76b A G 10: 129,693,298 (GRCm39) R304G probably benign Het
Or8u3-ps A T 2: 85,952,368 (GRCm39) I34F possibly damaging Het
Pih1d2 T A 9: 50,529,905 (GRCm39) C45S probably damaging Het
Pik3r2 G A 8: 71,223,737 (GRCm39) S318L possibly damaging Het
Pknox1 T C 17: 31,802,752 (GRCm39) I9T probably benign Het
Pknox2 T C 9: 36,835,041 (GRCm39) I143V probably damaging Het
Polr1d A G 5: 147,015,488 (GRCm39) Y57C probably damaging Het
Pum3 A T 19: 27,376,336 (GRCm39) D527E probably benign Het
Rars2 T A 4: 34,654,819 (GRCm39) H374Q probably damaging Het
Rassf9 G A 10: 102,348,369 (GRCm39) probably benign Het
Rbl1 T A 2: 157,016,742 (GRCm39) H619L possibly damaging Het
Scamp4 T C 10: 80,448,238 (GRCm39) V153A probably benign Het
Sec23b T G 2: 144,420,286 (GRCm39) I450S probably benign Het
Slc35b2 A G 17: 45,877,910 (GRCm39) I297V probably benign Het
Slc4a4 C T 5: 89,327,525 (GRCm39) T654I probably damaging Het
Slc6a5 T A 7: 49,601,185 (GRCm39) M662K probably damaging Het
Smarcad1 T C 6: 65,071,321 (GRCm39) Y589H probably benign Het
Spata31d1e T C 13: 59,890,012 (GRCm39) T603A probably benign Het
Stab1 A T 14: 30,883,069 (GRCm39) F374I probably benign Het
Stat5a C T 11: 100,756,254 (GRCm39) T158M possibly damaging Het
Trpc3 A T 3: 36,675,503 (GRCm39) Y878* probably null Het
Ubr1 T A 2: 120,765,765 (GRCm39) T491S probably benign Het
Uggt1 C T 1: 36,255,212 (GRCm39) probably null Het
Ugt1a6a T A 1: 88,066,882 (GRCm39) Y229* probably null Het
Vmn1r225 G A 17: 20,722,911 (GRCm39) W117* probably null Het
Vmn1r225 A C 17: 20,722,912 (GRCm39) K118Q probably damaging Het
Vmn1r43 G A 6: 89,846,877 (GRCm39) T203M probably damaging Het
Vmn2r116 T C 17: 23,620,566 (GRCm39) S767P probably damaging Het
Ythdf3 C T 3: 16,258,659 (GRCm39) P280S probably damaging Het
Zbbx A G 3: 75,019,390 (GRCm39) S107P probably benign Het
Zdhhc7 A T 8: 120,813,425 (GRCm39) V128E probably benign Het
Zfp235 A G 7: 23,841,551 (GRCm39) S657G probably damaging Het
Zfp442 T A 2: 150,251,615 (GRCm39) I96F possibly damaging Het
Zfp84 G A 7: 29,476,297 (GRCm39) E330K probably damaging Het
Other mutations in Wdr90
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00418:Wdr90 APN 17 26,068,338 (GRCm39) missense probably damaging 1.00
IGL01118:Wdr90 APN 17 26,073,661 (GRCm39) missense probably damaging 1.00
IGL01964:Wdr90 APN 17 26,067,383 (GRCm39) missense probably benign
IGL02116:Wdr90 APN 17 26,078,466 (GRCm39) missense probably benign 0.12
IGL02172:Wdr90 APN 17 26,069,408 (GRCm39) missense probably benign 0.22
IGL02716:Wdr90 APN 17 26,076,194 (GRCm39) missense probably damaging 0.96
IGL02961:Wdr90 APN 17 26,067,649 (GRCm39) nonsense probably null
IGL03229:Wdr90 APN 17 26,064,437 (GRCm39) splice site probably benign
IGL03367:Wdr90 APN 17 26,066,765 (GRCm39) splice site probably benign
IGL03098:Wdr90 UTSW 17 26,078,961 (GRCm39) intron probably benign
R0111:Wdr90 UTSW 17 26,067,418 (GRCm39) splice site probably benign
R0454:Wdr90 UTSW 17 26,079,023 (GRCm39) missense probably damaging 0.96
R0457:Wdr90 UTSW 17 26,079,459 (GRCm39) missense probably benign 0.00
R0488:Wdr90 UTSW 17 26,067,591 (GRCm39) missense probably damaging 1.00
R0622:Wdr90 UTSW 17 26,074,632 (GRCm39) missense probably damaging 1.00
R0671:Wdr90 UTSW 17 26,065,367 (GRCm39) missense probably benign 0.04
R0799:Wdr90 UTSW 17 26,079,104 (GRCm39) missense probably benign 0.38
R1177:Wdr90 UTSW 17 26,065,028 (GRCm39) missense possibly damaging 0.85
R1460:Wdr90 UTSW 17 26,079,422 (GRCm39) missense possibly damaging 0.82
R1468:Wdr90 UTSW 17 26,073,027 (GRCm39) missense probably damaging 1.00
R1468:Wdr90 UTSW 17 26,073,027 (GRCm39) missense probably damaging 1.00
R1544:Wdr90 UTSW 17 26,068,284 (GRCm39) missense possibly damaging 0.69
R2057:Wdr90 UTSW 17 26,074,173 (GRCm39) missense probably benign 0.05
R2087:Wdr90 UTSW 17 26,065,577 (GRCm39) missense probably damaging 1.00
R2159:Wdr90 UTSW 17 26,070,715 (GRCm39) missense probably benign
R2208:Wdr90 UTSW 17 26,079,362 (GRCm39) missense probably damaging 1.00
R2345:Wdr90 UTSW 17 26,078,136 (GRCm39) missense probably benign 0.05
R2391:Wdr90 UTSW 17 26,070,429 (GRCm39) missense probably damaging 1.00
R2394:Wdr90 UTSW 17 26,070,429 (GRCm39) missense probably damaging 1.00
R2520:Wdr90 UTSW 17 26,074,326 (GRCm39) missense probably damaging 1.00
R3798:Wdr90 UTSW 17 26,069,472 (GRCm39) missense probably benign 0.01
R3979:Wdr90 UTSW 17 26,078,252 (GRCm39) missense probably benign 0.00
R4111:Wdr90 UTSW 17 26,068,342 (GRCm39) missense possibly damaging 0.94
R4326:Wdr90 UTSW 17 26,072,705 (GRCm39) missense probably benign 0.25
R4459:Wdr90 UTSW 17 26,079,976 (GRCm39) missense possibly damaging 0.95
R4697:Wdr90 UTSW 17 26,074,337 (GRCm39) missense probably benign 0.03
R4735:Wdr90 UTSW 17 26,078,424 (GRCm39) missense probably benign
R4907:Wdr90 UTSW 17 26,079,624 (GRCm39) intron probably benign
R5070:Wdr90 UTSW 17 26,065,307 (GRCm39) missense probably damaging 1.00
R5230:Wdr90 UTSW 17 26,074,277 (GRCm39) missense probably benign 0.01
R5268:Wdr90 UTSW 17 26,069,819 (GRCm39) missense probably damaging 1.00
R5287:Wdr90 UTSW 17 26,080,441 (GRCm39) utr 5 prime probably benign
R5382:Wdr90 UTSW 17 26,064,572 (GRCm39) missense probably damaging 1.00
R5511:Wdr90 UTSW 17 26,063,995 (GRCm39) unclassified probably benign
R5545:Wdr90 UTSW 17 26,064,830 (GRCm39) missense probably damaging 1.00
R5707:Wdr90 UTSW 17 26,076,166 (GRCm39) missense probably benign 0.00
R5973:Wdr90 UTSW 17 26,065,381 (GRCm39) missense probably damaging 1.00
R5973:Wdr90 UTSW 17 26,064,107 (GRCm39) missense probably damaging 0.99
R6385:Wdr90 UTSW 17 26,067,504 (GRCm39) missense probably damaging 1.00
R6481:Wdr90 UTSW 17 26,064,885 (GRCm39) missense probably damaging 0.99
R7078:Wdr90 UTSW 17 26,068,623 (GRCm39) missense probably damaging 1.00
R7214:Wdr90 UTSW 17 26,064,367 (GRCm39) missense probably benign 0.00
R7288:Wdr90 UTSW 17 26,065,286 (GRCm39) missense probably benign 0.03
R7304:Wdr90 UTSW 17 26,070,480 (GRCm39) missense probably benign 0.10
R7309:Wdr90 UTSW 17 26,079,676 (GRCm39) missense probably benign 0.02
R7391:Wdr90 UTSW 17 26,065,502 (GRCm39) missense probably benign 0.08
R7622:Wdr90 UTSW 17 26,073,083 (GRCm39) missense probably benign 0.00
R7646:Wdr90 UTSW 17 26,079,104 (GRCm39) missense probably benign 0.38
R7772:Wdr90 UTSW 17 26,080,465 (GRCm39) start gained probably benign
R7779:Wdr90 UTSW 17 26,065,300 (GRCm39) missense probably damaging 1.00
R7780:Wdr90 UTSW 17 26,065,300 (GRCm39) missense probably damaging 1.00
R7781:Wdr90 UTSW 17 26,065,300 (GRCm39) missense probably damaging 1.00
R7782:Wdr90 UTSW 17 26,065,300 (GRCm39) missense probably damaging 1.00
R7812:Wdr90 UTSW 17 26,071,532 (GRCm39) missense probably damaging 1.00
R7870:Wdr90 UTSW 17 26,079,513 (GRCm39) missense probably damaging 0.96
R7911:Wdr90 UTSW 17 26,069,723 (GRCm39) missense probably benign 0.00
R8126:Wdr90 UTSW 17 26,067,951 (GRCm39) missense possibly damaging 0.48
R8260:Wdr90 UTSW 17 26,064,141 (GRCm39) missense probably damaging 1.00
R8315:Wdr90 UTSW 17 26,064,399 (GRCm39) missense probably benign 0.21
R8919:Wdr90 UTSW 17 26,076,146 (GRCm39) missense
R8938:Wdr90 UTSW 17 26,076,146 (GRCm39) missense
R8940:Wdr90 UTSW 17 26,076,146 (GRCm39) missense
R9038:Wdr90 UTSW 17 26,076,200 (GRCm39) missense
R9079:Wdr90 UTSW 17 26,076,403 (GRCm39) missense
R9471:Wdr90 UTSW 17 26,080,015 (GRCm39) missense possibly damaging 0.72
R9642:Wdr90 UTSW 17 26,072,694 (GRCm39) critical splice donor site probably null
X0064:Wdr90 UTSW 17 26,067,537 (GRCm39) missense probably damaging 1.00
Z1176:Wdr90 UTSW 17 26,079,470 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- TGTCCACCTACAGAGCAGTG -3'
(R):5'- GCAGCAGATTCTCACATCCC -3'

Sequencing Primer
(F):5'- GCTGTAGAAGATGACCTCCTCATG -3'
(R):5'- AGCAGATTCTCACATCCCTCATTTC -3'
Posted On 2022-05-16