Incidental Mutation 'IGL00309:Or5ar1'
| ID |
7130 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or5ar1
|
| Ensembl Gene |
ENSMUSG00000075208 |
| Gene Name |
olfactory receptor family 5 subfamily AR member 1 |
| Synonyms |
MOR180-1, Olfr1019, GA_x6K02T2Q125-47320309-47319377 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.145)
|
| Stock # |
IGL00309
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
2 |
| Chromosomal Location |
85671201-85672133 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to T
at 85671706 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Aspartic acid
at position 143
(V143D)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150622
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000102634]
[ENSMUST00000213515]
|
| AlphaFold |
Q8VGS3 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000102634
AA Change: V143D
PolyPhen 2
Score 0.018 (Sensitivity: 0.95; Specificity: 0.80)
|
| SMART Domains |
Protein: ENSMUSP00000099694
Gene: ENSMUSG00000075208
AA Change: V143D
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
308 |
1.7e-55 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
237 |
1.6e-6 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
1.4e-21 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000213515
AA Change: V143D
PolyPhen 2
Score 0.018 (Sensitivity: 0.95; Specificity: 0.80)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 25 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 4933430I17Rik |
T |
C |
4: 62,450,903 (GRCm39) |
|
probably benign |
Het |
| Abca9 |
T |
A |
11: 110,051,342 (GRCm39) |
D118V |
probably benign |
Het |
| Adgrb2 |
T |
A |
4: 129,912,598 (GRCm39) |
I1241N |
probably damaging |
Het |
| Arsb |
A |
G |
13: 93,926,608 (GRCm39) |
D126G |
probably benign |
Het |
| BB014433 |
G |
T |
8: 15,092,510 (GRCm39) |
N114K |
probably benign |
Het |
| Ccne2 |
T |
A |
4: 11,199,322 (GRCm39) |
V241E |
probably benign |
Het |
| Ccnjl |
A |
T |
11: 43,474,023 (GRCm39) |
K199N |
probably benign |
Het |
| Cyp2c55 |
A |
G |
19: 39,000,190 (GRCm39) |
T130A |
probably benign |
Het |
| Cyp2c70 |
A |
T |
19: 40,145,270 (GRCm39) |
N395K |
probably benign |
Het |
| Dst |
T |
C |
1: 34,199,733 (GRCm39) |
V67A |
probably damaging |
Het |
| Dysf |
G |
A |
6: 84,085,081 (GRCm39) |
R806H |
probably damaging |
Het |
| Extl3 |
G |
A |
14: 65,314,438 (GRCm39) |
P248L |
probably benign |
Het |
| Fcgbp |
A |
G |
7: 27,784,555 (GRCm39) |
D205G |
probably damaging |
Het |
| Gga1 |
G |
T |
15: 78,767,555 (GRCm39) |
V98L |
possibly damaging |
Het |
| Gpr6 |
C |
T |
10: 40,946,812 (GRCm39) |
A257T |
probably damaging |
Het |
| Mex3c |
C |
T |
18: 73,722,960 (GRCm39) |
T351M |
probably damaging |
Het |
| Or10d4c |
T |
A |
9: 39,558,636 (GRCm39) |
S205T |
probably benign |
Het |
| Or10g3b |
A |
G |
14: 52,587,167 (GRCm39) |
V112A |
probably benign |
Het |
| Or5g26 |
A |
T |
2: 85,494,700 (GRCm39) |
V26D |
probably benign |
Het |
| Prex1 |
A |
G |
2: 166,451,743 (GRCm39) |
Y412H |
probably damaging |
Het |
| Slc25a25 |
A |
T |
2: 32,309,172 (GRCm39) |
V75E |
probably benign |
Het |
| Sv2c |
A |
G |
13: 96,184,937 (GRCm39) |
C247R |
probably damaging |
Het |
| Trpm5 |
A |
T |
7: 142,636,728 (GRCm39) |
V403E |
probably benign |
Het |
| Wdr17 |
A |
G |
8: 55,140,746 (GRCm39) |
V202A |
probably damaging |
Het |
| Zscan25 |
A |
G |
5: 145,220,559 (GRCm39) |
E118G |
probably damaging |
Het |
|
| Other mutations in Or5ar1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02734:Or5ar1
|
APN |
2 |
85,671,883 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
IGL03030:Or5ar1
|
APN |
2 |
85,671,416 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03207:Or5ar1
|
APN |
2 |
85,671,317 (GRCm39) |
missense |
probably benign |
0.14 |
|
IGL03215:Or5ar1
|
APN |
2 |
85,671,725 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03220:Or5ar1
|
APN |
2 |
85,671,326 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R0441:Or5ar1
|
UTSW |
2 |
85,671,859 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4013:Or5ar1
|
UTSW |
2 |
85,671,725 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4604:Or5ar1
|
UTSW |
2 |
85,671,526 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5307:Or5ar1
|
UTSW |
2 |
85,671,358 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5754:Or5ar1
|
UTSW |
2 |
85,671,656 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6010:Or5ar1
|
UTSW |
2 |
85,671,905 (GRCm39) |
missense |
probably benign |
0.16 |
|
R6062:Or5ar1
|
UTSW |
2 |
85,671,458 (GRCm39) |
missense |
probably benign |
|
|
R6103:Or5ar1
|
UTSW |
2 |
85,671,776 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6443:Or5ar1
|
UTSW |
2 |
85,671,979 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7442:Or5ar1
|
UTSW |
2 |
85,672,096 (GRCm39) |
missense |
probably benign |
0.04 |
|
R7490:Or5ar1
|
UTSW |
2 |
85,671,307 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7524:Or5ar1
|
UTSW |
2 |
85,671,701 (GRCm39) |
missense |
probably benign |
|
|
R7605:Or5ar1
|
UTSW |
2 |
85,671,383 (GRCm39) |
missense |
probably benign |
0.34 |
|
R7615:Or5ar1
|
UTSW |
2 |
85,672,001 (GRCm39) |
missense |
probably benign |
0.02 |
|
R9706:Or5ar1
|
UTSW |
2 |
85,671,658 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2012-04-20 |
Incidental Mutation