Incidental Mutation 'R9434:Vmn1r196'
ID 713185
Institutional Source Beutler Lab
Gene Symbol Vmn1r196
Ensembl Gene ENSMUSG00000069295
Gene Name vomeronasal 1 receptor 196
Synonyms
MMRRC Submission
Accession Numbers
Essential gene? Probably non essential (E-score: 0.063) question?
Stock # R9434 (G1)
Quality Score 225.009
Status Validated
Chromosome 13
Chromosomal Location 22289920-22298360 bp(+) (GRCm38)
Type of Mutation nonsense
DNA Base Change (assembly) T to A at 22293620 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Leucine to Stop codon at position 143 (L143*)
Ref Sequence ENSEMBL: ENSMUSP00000089329 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000091735] [ENSMUST00000226245] [ENSMUST00000227516] [ENSMUST00000228382] [ENSMUST00000228557]
AlphaFold Q5SVD5
Predicted Effect probably null
Transcript: ENSMUST00000091735
AA Change: L143*
SMART Domains Protein: ENSMUSP00000089329
Gene: ENSMUSG00000069295
AA Change: L143*

DomainStartEndE-ValueType
Pfam:V1R 35 297 3.9e-35 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000226245
AA Change: L66*
Predicted Effect probably benign
Transcript: ENSMUST00000227516
Predicted Effect probably null
Transcript: ENSMUST00000228382
AA Change: L143*
Predicted Effect probably null
Transcript: ENSMUST00000228557
AA Change: L143*
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.7%
Validation Efficiency 98% (49/50)
Allele List at MGI
Other mutations in this stock
Total: 51 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam24 A G 8: 40,680,245 I251V probably benign Het
Adgrv1 T C 13: 81,518,173 probably benign Het
Adipoq A G 16: 23,146,947 probably benign Het
Adnp C T 2: 168,184,457 R306Q probably damaging Het
Akap11 A T 14: 78,510,389 N1519K Het
Bach1 C G 16: 87,719,715 S381R probably benign Het
Cdc14a T C 3: 116,423,443 M15V probably benign Het
Cgn T C 3: 94,765,530 D947G probably damaging Het
Crhr2 A T 6: 55,092,527 F381I probably damaging Het
Dmxl1 G T 18: 49,877,721 A982S probably damaging Het
Epha5 T C 5: 84,331,368 E259G possibly damaging Het
Erbb4 T C 1: 68,042,614 D1087G possibly damaging Het
Fcgr2b A T 1: 170,965,816 S215T probably benign Het
Fsip2 A T 2: 82,986,358 Y4145F possibly damaging Het
Fyb2 C T 4: 104,990,337 T518M probably damaging Het
Galk1 C T 11: 116,012,668 W4* probably null Het
Gm11639 T C 11: 105,009,037 V4375A probably benign Het
Gm7534 T G 4: 134,202,242 T251P probably benign Het
Gmds C A 13: 32,100,386 D248Y probably damaging Het
Herc3 T A 6: 58,876,861 F631I probably benign Het
Hhla1 T C 15: 65,967,377 K55E possibly damaging Het
Il17rb T C 14: 30,006,097 E51G probably damaging Het
Ildr1 T A 16: 36,709,500 L83Q probably damaging Het
Ints9 A G 14: 65,008,057 I255V probably benign Het
Itga9 G T 9: 118,807,247 D668Y probably damaging Het
Itpr3 G A 17: 27,118,677 probably benign Het
Klhl35 A G 7: 99,470,340 Y344C probably damaging Het
Klra4 A G 6: 130,063,120 V63A possibly damaging Het
Lgr4 A G 2: 110,006,562 T414A probably benign Het
Lmbrd2 C T 15: 9,157,227 T184M probably benign Het
Lrp1 T C 10: 127,545,820 D3795G possibly damaging Het
N6amt1 T A 16: 87,362,533 L109Q possibly damaging Het
Ncoa1 A G 12: 4,315,755 C215R probably benign Het
Ngef G A 1: 87,480,593 S584F possibly damaging Het
Notch4 T C 17: 34,582,699 C1174R probably damaging Het
Olfr1234 A G 2: 89,363,348 V27A probably benign Het
Olfr1420 A C 19: 11,896,029 I3L probably benign Het
Olfr22-ps1 A T 11: 73,954,836 I49F probably damaging Het
Olfr99 T C 17: 37,280,363 E19G probably benign Het
Opa1 T C 16: 29,586,056 I24T probably benign Het
Pcnx2 A G 8: 125,815,773 V1223A probably benign Het
Phf14 A G 6: 11,933,493 K118R unknown Het
Plcd1 A T 9: 119,076,163 M186K probably damaging Het
Selplg GTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCT GTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCT 5: 113,819,695 probably benign Het
Shank1 G A 7: 44,312,918 S71N unknown Het
Sumf1 A T 6: 108,153,135 C233S possibly damaging Het
Tbc1d12 A G 19: 38,914,017 K540R probably benign Het
Tmem150c T C 5: 100,092,784 N73S probably damaging Het
Tpra1 T C 6: 88,911,792 S319P probably benign Het
Ttk C A 9: 83,868,090 Y699* probably null Het
Vmn2r84 A G 10: 130,385,876 V825A possibly damaging Het
Other mutations in Vmn1r196
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01941:Vmn1r196 APN 13 22293699 nonsense probably null
R0415:Vmn1r196 UTSW 13 22293836 missense probably damaging 1.00
R0502:Vmn1r196 UTSW 13 22293387 missense probably benign 0.01
R0503:Vmn1r196 UTSW 13 22293387 missense probably benign 0.01
R2306:Vmn1r196 UTSW 13 22293303 missense probably benign 0.08
R4463:Vmn1r196 UTSW 13 22293683 missense probably benign
R6335:Vmn1r196 UTSW 13 22293717 missense probably benign 0.18
R7664:Vmn1r196 UTSW 13 22293762 missense probably damaging 1.00
R8062:Vmn1r196 UTSW 13 22293270 missense probably damaging 1.00
R9017:Vmn1r196 UTSW 13 22294084 missense probably benign 0.00
R9583:Vmn1r196 UTSW 13 22293750 missense probably damaging 0.96
S24628:Vmn1r196 UTSW 13 22293836 missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TGCCAGTGACAATTGCAGC -3'
(R):5'- AAGAAATACCATGTAGCCACTGG -3'

Sequencing Primer
(F):5'- CCAGTGACAATTGCAGCTTTAGG -3'
(R):5'- ACTGGCCCCTCCCATGG -3'
Posted On 2022-05-16