Mutagenetix > Incidental Mutation

Incidental Mutation 'R9441:Serbp1'

713642

Institutional Source

Beutler Lab

Gene Symbol

Serbp1

Ensembl Gene

ENSMUSG00000036371

Gene Name

serpine1 mRNA binding protein 1

Synonyms

9330147J08Rik, 1200009K13Rik

MMRRC Submission

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.631) question?

Stock #

R9441 (G1)

Quality Score

224.009

Status

Not validated

Chromosome

Chromosomal Location

67243963-67266286 bp(+) (GRCm39)

Type of Mutation

start gained

DNA Base Change (assembly)

T to C at 67244025 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000144933 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000042990] [ENSMUST00000203077] [ENSMUST00000203233] [ENSMUST00000203436] [ENSMUST00000204293] [ENSMUST00000204294] [ENSMUST00000205091] [ENSMUST00000205106]

AlphaFold

Q9CY58

Predicted Effect

probably benign
Transcript: ENSMUST00000042990

SMART Domains

Protein: ENSMUSP00000039110
Gene: ENSMUSG00000036371

Domain	Start	End	E-Value	Type
Pfam:IHABP4_N	5	152	7.4e-42	PFAM
HABP4_PAI-RBP1	189	313	2.73e-44	SMART
low complexity region	362	384	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000203077

SMART Domains

Protein: ENSMUSP00000144913
Gene: ENSMUSG00000036371

Domain	Start	End	E-Value	Type
Pfam:IHABP4_N	5	152	6.9e-42	PFAM
HABP4_PAI-RBP1	189	298	3.23e-46	SMART
low complexity region	347	369	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000203233

SMART Domains

Protein: ENSMUSP00000144754
Gene: ENSMUSG00000036371

Domain	Start	End	E-Value	Type
Pfam:IHABP4_N	5	149	1e-36	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000203436

SMART Domains

Protein: ENSMUSP00000144713
Gene: ENSMUSG00000036371

Domain	Start	End	E-Value	Type
Pfam:IHABP4_N	5	152	1e-41	PFAM
HABP4_PAI-RBP1	189	307	3.66e-45	SMART
low complexity region	356	378	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000204034

Predicted Effect

probably benign
Transcript: ENSMUST00000204135

Predicted Effect

probably benign
Transcript: ENSMUST00000204293

SMART Domains

Protein: ENSMUSP00000145472
Gene: ENSMUSG00000036371

Domain	Start	End	E-Value	Type
Pfam:IHABP4_N	5	152	9.6e-42	PFAM
HABP4_PAI-RBP1	189	292	7.04e-47	SMART
low complexity region	341	363	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000204294

SMART Domains

Protein: ENSMUSP00000145517
Gene: ENSMUSG00000036371

Domain	Start	End	E-Value	Type
Pfam:IHABP4_N	5	152	1.4e-38	PFAM
low complexity region	155	190	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000205091

SMART Domains

Protein: ENSMUSP00000144772
Gene: ENSMUSG00000036371

Domain	Start	End	E-Value	Type
Pfam:IHABP4_N	5	146	1.3e-36	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000205106

SMART Domains

Protein: ENSMUSP00000144933
Gene: ENSMUSG00000036371

Domain	Start	End	E-Value	Type
Pfam:IHABP4_N	5	152	1e-38	PFAM
HABP4_PAI-RBP1	189	268	1.6e-31	SMART
low complexity region	317	339	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.4%
20x: 98.0%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 56 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930563M21Rik	C	A	9: 55,917,776 (GRCm39)	G20V	unknown	Het
Adam22	T	C	5: 8,161,974 (GRCm39)	T733A	possibly damaging	Het
Adam28	T	A	14: 68,874,943 (GRCm39)	N245Y	probably damaging	Het
Aldh9a1	C	G	1: 167,177,919 (GRCm39)	R39G	probably benign	Het
Armc3	A	C	2: 19,253,426 (GRCm39)	E189A	possibly damaging	Het
Atg9a	C	T	1: 75,163,086 (GRCm39)	C338Y	possibly damaging	Het
Card6	TTGGGAGGACTGTGGATGAGAGGGCTTAGCATGGGAGGACTGTGGATGAGAGGGCTTAGCATGGGAGGACTGTGGATGAGAGGGCTTAGCATGGGAGGACTGCGGATGAGAGGGCTTAGCATGGGAGGACTG	TTGGGAGGACTGTGGATGAGAGGGCTTAGCATGGGAGGACTGTGGATGAGAGGGCTTAGCATGGGAGGACTGCGGATGAGAGGGCTTAGCATGGGAGGACTG	15: 5,128,173 (GRCm39)		probably benign	Het
Cars1	G	A	7: 143,123,185 (GRCm39)	T560I	probably benign	Het
Casp8ap2	A	G	4: 32,645,873 (GRCm39)	K1649E	probably benign	Het
Ccdc88b	T	C	19: 6,833,213 (GRCm39)	E278G	probably damaging	Het
Cd84	G	A	1: 171,713,994 (GRCm39)		probably null	Het
Ces2g	G	T	8: 105,690,623 (GRCm39)	A135S	possibly damaging	Het
Cfh	T	C	1: 140,030,149 (GRCm39)	D926G	probably benign	Het
Chrm2	A	G	6: 36,500,955 (GRCm39)	T271A	probably benign	Het
Col6a3	G	T	1: 90,705,249 (GRCm39)	Y2824*	probably null	Het
Cth	T	A	3: 157,616,575 (GRCm39)	R196S	probably damaging	Het
Cyp2g1	T	C	7: 26,514,060 (GRCm39)	M222T	possibly damaging	Het
Depdc5	T	A	5: 33,095,042 (GRCm39)	M773K	probably benign	Het
Dmbx1	G	A	4: 115,780,884 (GRCm39)	P39L	probably damaging	Het
Dst	G	C	1: 34,238,432 (GRCm39)	W1697C	probably damaging	Het
Eno1	C	T	4: 150,321,208 (GRCm39)		probably benign	Het
Erc2	G	T	14: 27,802,114 (GRCm39)	V761L	possibly damaging	Het
Frem1	A	T	4: 82,924,083 (GRCm39)	I292N	probably damaging	Het
Ftdc2	G	A	16: 58,458,884 (GRCm39)		probably benign	Het
Hip1	G	T	5: 135,460,571 (GRCm39)	L530M	possibly damaging	Het
Kcna2	A	G	3: 107,012,268 (GRCm39)	Q283R	probably benign	Het
Kndc1	G	A	7: 139,501,392 (GRCm39)	D894N	probably damaging	Het
Lats1	G	T	10: 7,578,681 (GRCm39)	G602W	probably damaging	Het
Lgals12	A	G	19: 7,581,356 (GRCm39)	L117P	probably damaging	Het
Mfsd4b1	A	T	10: 39,878,680 (GRCm39)	L406I	possibly damaging	Het
Msln	A	T	17: 25,969,731 (GRCm39)	M333K	probably benign	Het
Mup2	A	G	4: 60,139,740 (GRCm39)	V16A	probably benign	Het
Mybpc2	T	C	7: 44,166,330 (GRCm39)	E220G	probably null	Het
Myh6	A	G	14: 55,197,771 (GRCm39)	Y456H	probably benign	Het
Nlrp1a	A	G	11: 71,013,934 (GRCm39)	S439P	probably damaging	Het
Nyap1	T	C	5: 137,733,194 (GRCm39)	E613G	probably benign	Het
Or10b1	G	A	10: 78,355,609 (GRCm39)	V56M	probably benign	Het
Parp8	C	T	13: 117,029,562 (GRCm39)	V554M	probably damaging	Het
Phpt1	A	T	2: 25,464,750 (GRCm39)	D34E	probably benign	Het
Ppip5k2	G	A	1: 97,672,921 (GRCm39)	S463L	probably benign	Het
Prss28	A	G	17: 25,530,215 (GRCm39)	Q173R	probably benign	Het
Rtel1	T	A	2: 180,988,860 (GRCm39)	W441R	possibly damaging	Het
Skint5	T	C	4: 113,347,848 (GRCm39)	K1319E	unknown	Het
Slc35a4	G	A	18: 36,816,111 (GRCm39)	G314S	probably damaging	Het
Slc8a1	A	G	17: 81,956,498 (GRCm39)	I180T	probably damaging	Het
Spire1	G	A	18: 67,652,462 (GRCm39)	P205L	probably benign	Het
Tat	G	T	8: 110,720,547 (GRCm39)	G168W	probably damaging	Het
Thap1	CAGCATCTGCTCGGAGCA	CAGCA	8: 26,650,884 (GRCm39)		probably null	Het
Trh	C	T	6: 92,219,939 (GRCm39)	G126R	probably benign	Het
Ugcg	G	A	4: 59,207,843 (GRCm39)	G61R	probably damaging	Het
Uggt1	T	C	1: 36,260,306 (GRCm39)	T170A	probably benign	Het
Unc5b	G	A	10: 60,608,028 (GRCm39)	P702S	probably damaging	Het
Usp8	A	G	2: 126,562,073 (GRCm39)	D89G	possibly damaging	Het
Vmn2r1	T	A	3: 64,012,674 (GRCm39)	I845K	probably damaging	Het
Vnn3	A	G	10: 23,740,498 (GRCm39)	N267S	possibly damaging	Het
Xkr9	A	G	1: 13,771,587 (GRCm39)	R368G	possibly damaging	Het

Other mutations in Serbp1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02962:Serbp1	APN	6	67,244,103 (GRCm39)	missense	probably damaging	1.00
IGL03131:Serbp1	APN	6	67,258,807 (GRCm39)	critical splice donor site	probably null
R0193:Serbp1	UTSW	6	67,249,868 (GRCm39)	makesense	probably null
R1448:Serbp1	UTSW	6	67,254,904 (GRCm39)	missense	probably damaging	1.00
R3946:Serbp1	UTSW	6	67,249,204 (GRCm39)	missense	probably benign	0.39
R4980:Serbp1	UTSW	6	67,254,872 (GRCm39)	missense	probably benign	0.16
R5895:Serbp1	UTSW	6	67,249,870 (GRCm39)	makesense	probably null
R6210:Serbp1	UTSW	6	67,249,851 (GRCm39)	utr 3 prime	probably benign
R8702:Serbp1	UTSW	6	67,244,156 (GRCm39)	missense	probably damaging	1.00
R9191:Serbp1	UTSW	6	67,249,838 (GRCm39)	missense	probably benign
R9295:Serbp1	UTSW	6	67,248,208 (GRCm39)	missense	probably damaging	0.98
R9461:Serbp1	UTSW	6	67,244,313 (GRCm39)	missense	probably benign	0.12

Predicted Primers

PCR Primer
(F):5'- CGCTGGGAGTTGAAGTTCAG -3'
(R):5'- GGACTCTTTACGCAACTGTTTG -3'

Sequencing Primer
(F):5'- GTTCAGGAGTAGACAGCCATCC -3'
(R):5'- CAACTGTTTGCCCGCCG -3'

Posted On

2022-06-15