Incidental Mutation 'R9455:Pear1'
ID 714518
Institutional Source Beutler Lab
Gene Symbol Pear1
Ensembl Gene ENSMUSG00000028073
Gene Name platelet endothelial aggregation receptor 1
Synonyms Jedi-1, 3110045G13Rik
MMRRC Submission
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R9455 (G1)
Quality Score 225.009
Status Not validated
Chromosome 3
Chromosomal Location 87656404-87676262 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 87666488 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Serine at position 72 (T72S)
Ref Sequence ENSEMBL: ENSMUSP00000133474 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000029714] [ENSMUST00000079083] [ENSMUST00000090981] [ENSMUST00000172590] [ENSMUST00000172621] [ENSMUST00000173184] [ENSMUST00000173225] [ENSMUST00000173468] [ENSMUST00000174219] [ENSMUST00000174267] [ENSMUST00000174713] [ENSMUST00000174759] [ENSMUST00000174776]
AlphaFold Q8VIK5
Predicted Effect possibly damaging
Transcript: ENSMUST00000029714
AA Change: T72S

PolyPhen 2 Score 0.956 (Sensitivity: 0.79; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000029714
Gene: ENSMUSG00000028073
AA Change: T72S

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
low complexity region 67 78 N/A INTRINSIC
EGF 102 130 3.82e-2 SMART
EGF_like 132 173 2.92e1 SMART
EGF_like 146 185 1.92e0 SMART
EGF_like 189 246 1.99e0 SMART
EGF 217 258 1.04e1 SMART
EGF_Lam 274 313 1.21e-4 SMART
EGF 312 344 4.03e-1 SMART
EGF_Lam 361 402 1.33e-1 SMART
EGF 401 433 1.18e-2 SMART
EGF_like 449 488 1.72e0 SMART
EGF 487 519 6.92e0 SMART
EGF_Lam 535 574 2.08e-3 SMART
EGF 573 605 5.49e-3 SMART
EGF_Lam 620 660 1.58e-3 SMART
EGF 659 691 3.1e-2 SMART
EGF 702 734 2.53e1 SMART
transmembrane domain 754 776 N/A INTRINSIC
low complexity region 809 822 N/A INTRINSIC
low complexity region 829 835 N/A INTRINSIC
low complexity region 954 971 N/A INTRINSIC
low complexity region 993 1002 N/A INTRINSIC
low complexity region 1019 1031 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000079083
AA Change: T72S

PolyPhen 2 Score 0.956 (Sensitivity: 0.79; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000078090
Gene: ENSMUSG00000028073
AA Change: T72S

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
low complexity region 67 78 N/A INTRINSIC
EGF 102 130 3.82e-2 SMART
EGF_like 132 173 2.92e1 SMART
EGF_like 146 185 1.92e0 SMART
EGF_like 189 246 1.99e0 SMART
EGF 217 258 1.04e1 SMART
EGF_Lam 274 313 1.21e-4 SMART
EGF 312 344 4.03e-1 SMART
EGF_Lam 361 402 1.33e-1 SMART
EGF 401 433 1.18e-2 SMART
EGF_like 449 488 1.72e0 SMART
EGF 487 519 6.92e0 SMART
EGF_Lam 535 574 2.08e-3 SMART
EGF 573 605 5.49e-3 SMART
EGF_Lam 620 660 1.58e-3 SMART
EGF 659 691 3.1e-2 SMART
EGF 702 734 2.53e1 SMART
transmembrane domain 754 776 N/A INTRINSIC
low complexity region 809 822 N/A INTRINSIC
low complexity region 829 835 N/A INTRINSIC
low complexity region 954 971 N/A INTRINSIC
low complexity region 993 1002 N/A INTRINSIC
low complexity region 1019 1031 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000090981
AA Change: T72S

PolyPhen 2 Score 0.956 (Sensitivity: 0.79; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000088503
Gene: ENSMUSG00000028073
AA Change: T72S

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
low complexity region 67 78 N/A INTRINSIC
EGF 102 130 3.82e-2 SMART
EGF_like 132 173 2.92e1 SMART
EGF_like 146 185 1.92e0 SMART
EGF_like 189 246 1.99e0 SMART
EGF 217 258 1.04e1 SMART
EGF_Lam 274 313 1.21e-4 SMART
EGF 312 344 4.03e-1 SMART
EGF_Lam 361 402 1.33e-1 SMART
EGF 401 433 1.18e-2 SMART
EGF_like 449 488 1.72e0 SMART
EGF 487 519 6.92e0 SMART
EGF_Lam 535 574 2.08e-3 SMART
EGF 573 605 5.49e-3 SMART
EGF_Lam 620 660 1.58e-3 SMART
EGF 659 691 3.1e-2 SMART
EGF 702 734 2.53e1 SMART
transmembrane domain 754 776 N/A INTRINSIC
low complexity region 809 822 N/A INTRINSIC
low complexity region 829 835 N/A INTRINSIC
low complexity region 954 971 N/A INTRINSIC
low complexity region 993 1002 N/A INTRINSIC
low complexity region 1019 1031 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000172590
SMART Domains Protein: ENSMUSP00000133480
Gene: ENSMUSG00000028073

DomainStartEndE-ValueType
Blast:EGF 23 50 8e-13 BLAST
Predicted Effect possibly damaging
Transcript: ENSMUST00000172621
AA Change: T72S

PolyPhen 2 Score 0.956 (Sensitivity: 0.79; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000133474
Gene: ENSMUSG00000028073
AA Change: T72S

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
low complexity region 67 78 N/A INTRINSIC
EGF 102 130 3.82e-2 SMART
EGF_like 132 173 2.92e1 SMART
EGF_like 146 185 1.92e0 SMART
EGF_like 189 246 1.99e0 SMART
EGF 217 258 1.04e1 SMART
EGF_Lam 274 313 1.21e-4 SMART
EGF 312 344 4.03e-1 SMART
EGF_Lam 361 402 1.33e-1 SMART
EGF 401 433 1.18e-2 SMART
EGF_like 449 488 1.72e0 SMART
EGF 487 519 6.92e0 SMART
EGF_Lam 535 574 2.08e-3 SMART
EGF 573 605 5.49e-3 SMART
EGF_Lam 620 660 1.58e-3 SMART
EGF 659 691 3.1e-2 SMART
EGF 702 734 2.53e1 SMART
transmembrane domain 754 776 N/A INTRINSIC
low complexity region 809 822 N/A INTRINSIC
low complexity region 829 835 N/A INTRINSIC
low complexity region 954 971 N/A INTRINSIC
low complexity region 993 1002 N/A INTRINSIC
low complexity region 1019 1031 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000173184
AA Change: T72S

PolyPhen 2 Score 0.956 (Sensitivity: 0.79; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000134100
Gene: ENSMUSG00000028073
AA Change: T72S

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:EMI 23 95 3.5e-17 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000173225
SMART Domains Protein: ENSMUSP00000134387
Gene: ENSMUSG00000028073

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000173468
AA Change: T72S

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000133988
Gene: ENSMUSG00000028073
AA Change: T72S

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:EMI 23 96 2.1e-16 PFAM
EGF 102 130 3.82e-2 SMART
EGF_like 132 173 2.92e1 SMART
EGF 184 215 1.84e1 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000174219
SMART Domains Protein: ENSMUSP00000133565
Gene: ENSMUSG00000028073

DomainStartEndE-ValueType
EGF 15 47 4.03e-1 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000174267
SMART Domains Protein: ENSMUSP00000133626
Gene: ENSMUSG00000028073

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000174713
SMART Domains Protein: ENSMUSP00000134215
Gene: ENSMUSG00000028073

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000174759
AA Change: T72S

PolyPhen 2 Score 0.956 (Sensitivity: 0.79; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000133323
Gene: ENSMUSG00000028073
AA Change: T72S

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
low complexity region 67 78 N/A INTRINSIC
EGF 102 130 3.82e-2 SMART
EGF_like 132 173 2.92e1 SMART
EGF_like 146 185 1.92e0 SMART
EGF_like 189 246 1.99e0 SMART
EGF 217 258 1.04e1 SMART
EGF_Lam 274 313 1.21e-4 SMART
EGF 312 344 4.03e-1 SMART
EGF_Lam 361 402 1.33e-1 SMART
EGF 401 433 1.18e-2 SMART
EGF_like 449 488 1.72e0 SMART
EGF 487 519 6.92e0 SMART
EGF_Lam 535 574 2.08e-3 SMART
EGF 573 605 5.49e-3 SMART
EGF_Lam 620 660 1.58e-3 SMART
EGF 659 691 3.1e-2 SMART
EGF 702 734 2.53e1 SMART
transmembrane domain 754 776 N/A INTRINSIC
low complexity region 809 822 N/A INTRINSIC
low complexity region 829 835 N/A INTRINSIC
low complexity region 954 971 N/A INTRINSIC
low complexity region 993 1002 N/A INTRINSIC
low complexity region 1019 1031 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000174776
AA Change: T72S

PolyPhen 2 Score 0.956 (Sensitivity: 0.79; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000133749
Gene: ENSMUSG00000028073
AA Change: T72S

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:EMI 23 96 6.3e-17 PFAM
Blast:FU 97 120 1e-5 BLAST
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.8%
  • 20x: 99.2%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] PEAR1 is a platelet receptor that signals upon the formation of platelet-platelet contacts independent of platelet activation and secondary to platelet aggregation (Nanda et al., 2005 [PubMed 15851471]).[supplied by OMIM, Mar 2008]
PHENOTYPE: Mice homozygous for a knock-out allele show no apparent defects in hemostasis or thrombus formation. Although in vitro dextran sulfate-induced platelet aggregation is impaired, platelet aggregation initiated with physiological agonists is normal. [provided by MGI curators]
Allele List at MGI

All alleles(3) : Targeted(2) Gene trapped(1)

Other mutations in this stock
Total: 57 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca13 T C 11: 9,353,897 (GRCm39) Y3740H probably damaging Het
Acsl6 G T 11: 54,210,752 (GRCm39) probably benign Het
Adamts5 C T 16: 85,667,017 (GRCm39) D492N probably damaging Het
Als2 T C 1: 59,219,296 (GRCm39) E1218G probably damaging Het
Bcl2l15 C T 3: 103,743,369 (GRCm39) T90I unknown Het
Bsn A G 9: 107,988,531 (GRCm39) V2407A unknown Het
Casp8ap2 T C 4: 32,643,924 (GRCm39) M999T possibly damaging Het
Ccdc66 G A 14: 27,208,872 (GRCm39) P461S probably benign Het
Cd46 G A 1: 194,744,704 (GRCm39) L345F possibly damaging Het
Cep295 A T 9: 15,245,046 (GRCm39) S1137T possibly damaging Het
Chd7 A G 4: 8,752,061 (GRCm39) Y186C unknown Het
Clca3b T A 3: 144,529,023 (GRCm39) T884S unknown Het
Cndp2 T A 18: 84,690,246 (GRCm39) Y232F probably benign Het
Cx3cr1 A T 9: 119,880,659 (GRCm39) Y248N probably damaging Het
Dnm3 A T 1: 162,148,524 (GRCm39) N282K possibly damaging Het
Emilin2 T C 17: 71,581,485 (GRCm39) I414V probably benign Het
F3 A T 3: 121,527,866 (GRCm39) N288I probably damaging Het
Fat4 T C 3: 38,945,412 (GRCm39) L1435P Het
Fbxw14 A T 9: 109,103,567 (GRCm39) N371K probably benign Het
Firrm G T 1: 163,781,721 (GRCm39) T902K probably benign Het
Fn1 T A 1: 71,647,112 (GRCm39) E1559D probably benign Het
Frrs1 T A 3: 116,695,972 (GRCm39) M497K possibly damaging Het
Gm45861 C T 8: 28,041,394 (GRCm39) Q1000* probably null Het
Gpr152 T C 19: 4,193,844 (GRCm39) S462P probably benign Het
Irgq A G 7: 24,231,217 (GRCm39) N136S probably benign Het
Kdm2b T C 5: 123,099,537 (GRCm39) Y134C probably damaging Het
Klf12 A T 14: 100,347,226 (GRCm39) L35H probably damaging Het
Krt9 TCCACTTCCTCCTCCATAGCTGCCCCCACTTCCTCCTCCATAGCTGCCCCCACTTCCTCCTCCATAGCTGCCCCCACTTCCTCCTCCATAGCTGCC TCCACTTCCTCCTCCATAGCTGCCCCCACTTCCTCCTCCATAGCTGCCCCCACTTCCTCCTCCATAGCTGCC 11: 100,079,903 (GRCm39) probably benign Het
Ksr1 A T 11: 78,911,602 (GRCm39) C727S possibly damaging Het
Lpin3 G T 2: 160,737,259 (GRCm39) R102L probably benign Het
Ltv1 T C 10: 13,058,117 (GRCm39) E229G probably damaging Het
Ly6f T A 15: 75,141,648 (GRCm39) Y30* probably null Het
Map2k7 C G 8: 4,293,957 (GRCm39) R168G probably damaging Het
Mep1a T C 17: 43,805,867 (GRCm39) E100G probably benign Het
Mrgpra6 T A 7: 46,838,967 (GRCm39) Y46F probably damaging Het
Mroh6 C A 15: 75,759,905 (GRCm39) R143L probably benign Het
Myom2 T A 8: 15,156,293 (GRCm39) H713Q probably benign Het
Ndn C T 7: 61,998,337 (GRCm39) P61L possibly damaging Het
Or51b6 G T 7: 103,556,200 (GRCm39) V182F Het
Sel1l3 T A 5: 53,289,157 (GRCm39) N888I probably damaging Het
Sell A T 1: 163,894,218 (GRCm39) T171S probably benign Het
Semp2l1 A T 1: 32,585,907 (GRCm39) M1K probably null Het
Sin3b G T 8: 73,450,681 (GRCm39) A37S possibly damaging Het
Sipa1l1 T C 12: 82,434,399 (GRCm39) F723S probably damaging Het
Slc26a8 T C 17: 28,863,588 (GRCm39) T724A probably damaging Het
Slc51a T G 16: 32,305,013 (GRCm39) N25H probably damaging Het
Slc9a4 T C 1: 40,668,612 (GRCm39) F752L probably benign Het
Slco4a1 A C 2: 180,115,370 (GRCm39) D649A probably benign Het
Tax1bp1 T A 6: 52,743,029 (GRCm39) H805Q probably damaging Het
Tgfb1i1 T C 7: 127,852,009 (GRCm39) F303L probably damaging Het
Tsg101 A T 7: 46,563,151 (GRCm39) D34E probably damaging Het
Tspoap1 T C 11: 87,661,359 (GRCm39) S604P probably damaging Het
Ttll2 C A 17: 7,619,692 (GRCm39) W78C probably damaging Het
Ttn A G 2: 76,749,334 (GRCm39) F3905S possibly damaging Het
Txnrd2 G T 16: 18,248,615 (GRCm39) C57F probably damaging Het
Vcan A T 13: 89,837,452 (GRCm39) D2697E probably damaging Het
Vwa8 G A 14: 79,300,115 (GRCm39) V983I probably damaging Het
Other mutations in Pear1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00326:Pear1 APN 3 87,659,423 (GRCm39) missense possibly damaging 0.65
IGL01810:Pear1 APN 3 87,659,608 (GRCm39) missense probably damaging 0.98
IGL02269:Pear1 APN 3 87,663,571 (GRCm39) missense probably damaging 1.00
IGL02635:Pear1 APN 3 87,657,453 (GRCm39) makesense probably null
R0040:Pear1 UTSW 3 87,661,665 (GRCm39) missense probably damaging 0.99
R0040:Pear1 UTSW 3 87,661,665 (GRCm39) missense probably damaging 0.99
R0050:Pear1 UTSW 3 87,663,294 (GRCm39) nonsense probably null
R0050:Pear1 UTSW 3 87,663,294 (GRCm39) nonsense probably null
R0090:Pear1 UTSW 3 87,661,649 (GRCm39) missense possibly damaging 0.82
R0547:Pear1 UTSW 3 87,696,107 (GRCm39) splice site probably null
R1024:Pear1 UTSW 3 87,667,606 (GRCm39) unclassified probably benign
R1612:Pear1 UTSW 3 87,659,160 (GRCm39) critical splice donor site probably null
R1637:Pear1 UTSW 3 87,664,060 (GRCm39) missense probably damaging 0.97
R1772:Pear1 UTSW 3 87,661,799 (GRCm39) unclassified probably benign
R1888:Pear1 UTSW 3 87,717,882 (GRCm39) splice site probably benign
R2129:Pear1 UTSW 3 87,665,666 (GRCm39) nonsense probably null
R2255:Pear1 UTSW 3 87,659,493 (GRCm39) missense probably damaging 1.00
R3551:Pear1 UTSW 3 87,665,439 (GRCm39) missense probably benign
R3855:Pear1 UTSW 3 87,659,228 (GRCm39) missense possibly damaging 0.94
R4021:Pear1 UTSW 3 87,663,529 (GRCm39) missense possibly damaging 0.89
R4546:Pear1 UTSW 3 87,661,968 (GRCm39) missense probably damaging 1.00
R5364:Pear1 UTSW 3 87,665,668 (GRCm39) missense probably damaging 1.00
R5447:Pear1 UTSW 3 87,666,449 (GRCm39) missense probably damaging 1.00
R5504:Pear1 UTSW 3 87,660,002 (GRCm39) splice site probably benign
R6026:Pear1 UTSW 3 87,664,220 (GRCm39) missense probably damaging 1.00
R6061:Pear1 UTSW 3 87,663,238 (GRCm39) missense probably benign 0.02
R6155:Pear1 UTSW 3 87,666,875 (GRCm39) missense probably damaging 0.97
R6175:Pear1 UTSW 3 87,659,440 (GRCm39) missense possibly damaging 0.93
R6339:Pear1 UTSW 3 87,659,827 (GRCm39) missense probably damaging 1.00
R6385:Pear1 UTSW 3 87,661,506 (GRCm39) missense probably benign 0.00
R6715:Pear1 UTSW 3 87,666,424 (GRCm39) missense probably damaging 1.00
R6929:Pear1 UTSW 3 87,666,872 (GRCm39) nonsense probably null
R7088:Pear1 UTSW 3 87,661,945 (GRCm39) missense possibly damaging 0.80
R7097:Pear1 UTSW 3 87,658,752 (GRCm39) missense probably benign 0.00
R7229:Pear1 UTSW 3 87,657,596 (GRCm39) missense probably benign 0.00
R7334:Pear1 UTSW 3 87,657,532 (GRCm39) missense probably damaging 1.00
R7526:Pear1 UTSW 3 87,659,875 (GRCm39) missense probably damaging 0.99
R7872:Pear1 UTSW 3 87,659,522 (GRCm39) missense probably benign
R8925:Pear1 UTSW 3 87,661,890 (GRCm39) missense probably damaging 0.99
R8927:Pear1 UTSW 3 87,661,890 (GRCm39) missense probably damaging 0.99
R9014:Pear1 UTSW 3 87,658,479 (GRCm39) missense probably benign
R9405:Pear1 UTSW 3 87,659,890 (GRCm39) missense probably damaging 1.00
R9593:Pear1 UTSW 3 87,658,480 (GRCm39) missense probably benign 0.04
R9637:Pear1 UTSW 3 87,666,412 (GRCm39) missense probably benign 0.23
X0063:Pear1 UTSW 3 87,661,379 (GRCm39) missense probably damaging 1.00
Z1177:Pear1 UTSW 3 87,658,647 (GRCm39) missense possibly damaging 0.68
Predicted Primers PCR Primer
(F):5'- TTACTGGCCAAAGGGGAACTG -3'
(R):5'- TCACCTGTCTACAGTGGGTACC -3'

Sequencing Primer
(F):5'- GGAGCAGACAGTAGCACCC -3'
(R):5'- TACCCACGTGGCCTGTG -3'
Posted On 2022-06-15