Incidental Mutation 'R9343:Vmn1r209'
ID 715995
Institutional Source Beutler Lab
Gene Symbol Vmn1r209
Ensembl Gene ENSMUSG00000071491
Gene Name vomeronasal 1 receptor 209
Synonyms Gm11315
MMRRC Submission
Accession Numbers
Essential gene? Probably non essential (E-score: 0.091) question?
Stock # R9343 (G1)
Quality Score 225.009
Status Validated
Chromosome 13
Chromosomal Location 22800629-22809682 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) T to A at 22806376 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Histidine to Leucine at position 48 (H48L)
Ref Sequence ENSEMBL: ENSMUSP00000093657 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000095961] [ENSMUST00000227038] [ENSMUST00000227265]
AlphaFold Q5NC97
Predicted Effect probably damaging
Transcript: ENSMUST00000095961
AA Change: H48L

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000093657
Gene: ENSMUSG00000071491
AA Change: H48L

DomainStartEndE-ValueType
Pfam:TAS2R 2 294 9.8e-9 PFAM
Pfam:V1R 34 297 3e-36 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000227038
AA Change: H48L

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
Predicted Effect probably damaging
Transcript: ENSMUST00000227265
AA Change: H48L

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
Meta Mutation Damage Score 0.6329 question?
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.7%
Validation Efficiency 100% (45/45)
Allele List at MGI
Other mutations in this stock
Total: 45 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abtb2 A G 2: 103,717,160 I960V probably benign Het
Alpk3 A G 7: 81,092,331 D632G probably benign Het
Aplp2 A T 9: 31,211,639 L30Q unknown Het
Axl A T 7: 25,774,119 Y361N probably damaging Het
Brinp2 A T 1: 158,249,520 probably benign Het
Bsn T C 9: 108,115,502 D1017G probably damaging Het
Cc2d2a A T 5: 43,718,657 D1046V probably damaging Het
Cdc42bpg G A 19: 6,314,523 G594S probably damaging Het
Clcn6 A G 4: 148,014,001 S519P probably benign Het
Cnot2 T G 10: 116,510,421 H92P Het
Col2a1 T C 15: 97,979,894 D1049G probably damaging Het
Creld1 C T 6: 113,489,767 A237V probably benign Het
Csf2rb2 A T 15: 78,287,087 probably benign Het
Csmd3 G A 15: 48,151,605 T643I probably damaging Het
Fam186b G A 15: 99,279,735 A570V probably damaging Het
Fcmr A T 1: 130,874,335 T109S Het
Grap C A 11: 61,671,725 P174Q possibly damaging Het
Itgb5 T A 16: 33,910,456 probably benign Het
Kidins220 A G 12: 25,008,079 N561S probably damaging Het
Mkl2 T C 16: 13,400,927 V479A probably benign Het
Mri1 A T 8: 84,257,167 S32T probably benign Het
Muc4 A T 16: 32,751,153 T344S possibly damaging Het
Npc1 A G 18: 12,201,712 I661T possibly damaging Het
Npy1r A G 8: 66,704,099 N57S probably damaging Het
Pds5b A G 5: 150,780,721 D863G probably damaging Het
Phf14 T A 6: 11,961,564 V400D probably damaging Het
Polr2l A G 7: 141,473,333 I56T probably benign Het
Ppat A G 5: 76,916,037 I422T probably benign Het
Prkcg T A 7: 3,310,608 S110R possibly damaging Het
Rab7b A T 1: 131,711,802 probably benign Het
Rnf152 A T 1: 105,284,526 L102Q Het
Samd12 A G 15: 53,719,692 V82A probably damaging Het
Serpina1e T A 12: 103,951,040 R123S probably benign Het
Slit1 T A 19: 41,627,298 N794I probably damaging Het
Surf6 T C 2: 26,892,994 K154R probably damaging Het
Tln2 C T 9: 67,323,071 A71T probably benign Het
Trim3 A G 7: 105,611,466 Y649H probably benign Het
Ttll7 T A 3: 146,961,742 W808R probably damaging Het
Tvp23a T C 16: 10,427,423 D104G probably damaging Het
Upp2 A G 2: 58,755,327 probably benign Het
Vipr1 G A 9: 121,642,927 probably null Het
Vmn1r119 A G 7: 21,012,433 V8A probably benign Het
Wdr11 T C 7: 129,630,799 probably null Het
Zcchc17 T C 4: 130,316,753 D207G probably damaging Het
Zfp78 T C 7: 6,378,943 S331P probably damaging Het
Other mutations in Vmn1r209
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01773:Vmn1r209 APN 13 22806280 missense probably damaging 1.00
IGL01788:Vmn1r209 APN 13 22805662 missense probably damaging 0.97
IGL02738:Vmn1r209 APN 13 22806120 nonsense probably null
IGL03177:Vmn1r209 APN 13 22805854 missense possibly damaging 0.46
IGL03199:Vmn1r209 APN 13 22806050 missense possibly damaging 0.89
R0437:Vmn1r209 UTSW 13 22806356 missense probably benign 0.01
R0497:Vmn1r209 UTSW 13 22805948 missense probably damaging 1.00
R0506:Vmn1r209 UTSW 13 22805944 missense probably damaging 0.98
R1496:Vmn1r209 UTSW 13 22805764 missense probably damaging 1.00
R1644:Vmn1r209 UTSW 13 22806482 missense possibly damaging 0.52
R1829:Vmn1r209 UTSW 13 22806239 missense possibly damaging 0.95
R2360:Vmn1r209 UTSW 13 22805666 missense probably damaging 1.00
R3434:Vmn1r209 UTSW 13 22806097 missense probably benign 0.04
R3435:Vmn1r209 UTSW 13 22806097 missense probably benign 0.04
R4082:Vmn1r209 UTSW 13 22805615 missense probably null 0.15
R4451:Vmn1r209 UTSW 13 22806498 missense probably benign 0.02
R4616:Vmn1r209 UTSW 13 22805965 missense probably damaging 1.00
R4618:Vmn1r209 UTSW 13 22806449 missense possibly damaging 0.87
R4801:Vmn1r209 UTSW 13 22805656 missense probably damaging 1.00
R4802:Vmn1r209 UTSW 13 22805656 missense probably damaging 1.00
R6035:Vmn1r209 UTSW 13 22806032 missense probably benign 0.02
R6035:Vmn1r209 UTSW 13 22806032 missense probably benign 0.02
R6908:Vmn1r209 UTSW 13 22806230 missense possibly damaging 0.60
R7162:Vmn1r209 UTSW 13 22805958 missense probably damaging 1.00
R7772:Vmn1r209 UTSW 13 22806494 missense possibly damaging 0.77
R8328:Vmn1r209 UTSW 13 22806473 missense probably benign 0.00
R8335:Vmn1r209 UTSW 13 22805807 missense probably damaging 1.00
R8903:Vmn1r209 UTSW 13 22806514 missense probably benign 0.00
R8919:Vmn1r209 UTSW 13 22806053 missense probably benign
R8932:Vmn1r209 UTSW 13 22806173 missense probably damaging 1.00
R9307:Vmn1r209 UTSW 13 22805902 missense probably damaging 0.98
Predicted Primers PCR Primer
(F):5'- AGTCTGCTCCACCTAGATGC -3'
(R):5'- CTTCAAAACTGTATGCATCCTGG -3'

Sequencing Primer
(F):5'- ACTGATGATGATGGCCTGGACC -3'
(R):5'- AACTGTGGTTGGCACTCT -3'
Posted On 2022-06-15