Incidental Mutation 'R9488:Prg4'
ID |
716726 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Prg4
|
Ensembl Gene |
ENSMUSG00000006014 |
Gene Name |
proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) |
Synonyms |
MSF, SZP, lubricin, DOL54 |
MMRRC Submission |
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.125)
|
Stock # |
R9488 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
1 |
Chromosomal Location |
150325163-150341916 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 150327024 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Methionine to Valine
at position 342
(M342V)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000006171
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000006171]
[ENSMUST00000111901]
[ENSMUST00000111902]
[ENSMUST00000119161]
[ENSMUST00000124484]
[ENSMUST00000124973]
[ENSMUST00000161320]
[ENSMUST00000161611]
[ENSMUST00000162367]
[ENSMUST00000164600]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably benign
Transcript: ENSMUST00000006171
AA Change: M342V
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000006171 Gene: ENSMUSG00000006014 AA Change: M342V
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
24 |
N/A |
INTRINSIC |
SO
|
26 |
68 |
9.21e-18 |
SMART |
SO
|
69 |
108 |
4.21e-12 |
SMART |
low complexity region
|
110 |
124 |
N/A |
INTRINSIC |
HX
|
169 |
211 |
1.67e-7 |
SMART |
HX
|
213 |
256 |
3.76e-10 |
SMART |
Blast:HX
|
369 |
422 |
2e-27 |
BLAST |
|
Predicted Effect |
unknown
Transcript: ENSMUST00000111901
AA Change: M884V
|
SMART Domains |
Protein: ENSMUSP00000107532 Gene: ENSMUSG00000006014 AA Change: M884V
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
24 |
N/A |
INTRINSIC |
SO
|
26 |
68 |
9.21e-18 |
SMART |
SO
|
69 |
108 |
4.21e-12 |
SMART |
low complexity region
|
110 |
124 |
N/A |
INTRINSIC |
low complexity region
|
141 |
151 |
N/A |
INTRINSIC |
low complexity region
|
189 |
221 |
N/A |
INTRINSIC |
low complexity region
|
241 |
535 |
N/A |
INTRINSIC |
low complexity region
|
570 |
623 |
N/A |
INTRINSIC |
HX
|
711 |
753 |
1.67e-7 |
SMART |
HX
|
755 |
798 |
3.76e-10 |
SMART |
Blast:HX
|
911 |
964 |
5e-27 |
BLAST |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000111902
AA Change: M931V
PolyPhen 2
Score 0.008 (Sensitivity: 0.96; Specificity: 0.76)
|
SMART Domains |
Protein: ENSMUSP00000107533 Gene: ENSMUSG00000006014 AA Change: M931V
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
24 |
N/A |
INTRINSIC |
SO
|
25 |
67 |
2.71e-15 |
SMART |
low complexity region
|
69 |
81 |
N/A |
INTRINSIC |
low complexity region
|
86 |
143 |
N/A |
INTRINSIC |
low complexity region
|
150 |
171 |
N/A |
INTRINSIC |
low complexity region
|
188 |
198 |
N/A |
INTRINSIC |
low complexity region
|
236 |
268 |
N/A |
INTRINSIC |
low complexity region
|
288 |
582 |
N/A |
INTRINSIC |
internal_repeat_1
|
588 |
614 |
2.72e-5 |
PROSPERO |
low complexity region
|
617 |
670 |
N/A |
INTRINSIC |
internal_repeat_1
|
680 |
706 |
2.72e-5 |
PROSPERO |
HX
|
758 |
800 |
1.67e-7 |
SMART |
HX
|
802 |
845 |
3.76e-10 |
SMART |
Blast:HX
|
958 |
1011 |
4e-27 |
BLAST |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000119161
|
SMART Domains |
Protein: ENSMUSP00000112606 Gene: ENSMUSG00000006005
Domain | Start | End | E-Value | Type |
coiled coil region
|
49 |
370 |
N/A |
INTRINSIC |
coiled coil region
|
423 |
515 |
N/A |
INTRINSIC |
low complexity region
|
518 |
534 |
N/A |
INTRINSIC |
coiled coil region
|
539 |
604 |
N/A |
INTRINSIC |
low complexity region
|
690 |
703 |
N/A |
INTRINSIC |
low complexity region
|
782 |
795 |
N/A |
INTRINSIC |
low complexity region
|
811 |
826 |
N/A |
INTRINSIC |
low complexity region
|
1003 |
1019 |
N/A |
INTRINSIC |
Pfam:TPR_MLP1_2
|
1036 |
1167 |
9.1e-33 |
PFAM |
coiled coil region
|
1215 |
1421 |
N/A |
INTRINSIC |
coiled coil region
|
1473 |
1629 |
N/A |
INTRINSIC |
internal_repeat_3
|
1630 |
1691 |
1.48e-5 |
PROSPERO |
low complexity region
|
1695 |
1717 |
N/A |
INTRINSIC |
low complexity region
|
1761 |
1777 |
N/A |
INTRINSIC |
internal_repeat_5
|
1814 |
1827 |
5.58e-5 |
PROSPERO |
internal_repeat_3
|
1819 |
1881 |
1.48e-5 |
PROSPERO |
internal_repeat_4
|
1875 |
1895 |
5.58e-5 |
PROSPERO |
internal_repeat_1
|
1893 |
1919 |
2.03e-6 |
PROSPERO |
low complexity region
|
1920 |
1933 |
N/A |
INTRINSIC |
low complexity region
|
1942 |
1981 |
N/A |
INTRINSIC |
low complexity region
|
1989 |
2014 |
N/A |
INTRINSIC |
internal_repeat_4
|
2017 |
2036 |
5.58e-5 |
PROSPERO |
low complexity region
|
2059 |
2078 |
N/A |
INTRINSIC |
internal_repeat_2
|
2084 |
2135 |
3.95e-6 |
PROSPERO |
internal_repeat_5
|
2127 |
2140 |
5.58e-5 |
PROSPERO |
internal_repeat_1
|
2154 |
2179 |
2.03e-6 |
PROSPERO |
internal_repeat_2
|
2156 |
2212 |
3.95e-6 |
PROSPERO |
low complexity region
|
2239 |
2251 |
N/A |
INTRINSIC |
low complexity region
|
2263 |
2277 |
N/A |
INTRINSIC |
low complexity region
|
2292 |
2314 |
N/A |
INTRINSIC |
low complexity region
|
2346 |
2357 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000124484
|
SMART Domains |
Protein: ENSMUSP00000121991 Gene: ENSMUSG00000006005
Domain | Start | End | E-Value | Type |
low complexity region
|
26 |
38 |
N/A |
INTRINSIC |
low complexity region
|
50 |
64 |
N/A |
INTRINSIC |
low complexity region
|
79 |
101 |
N/A |
INTRINSIC |
low complexity region
|
133 |
144 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000124973
|
SMART Domains |
Protein: ENSMUSP00000117616 Gene: ENSMUSG00000006005
Domain | Start | End | E-Value | Type |
low complexity region
|
3 |
14 |
N/A |
INTRINSIC |
low complexity region
|
24 |
77 |
N/A |
INTRINSIC |
coiled coil region
|
123 |
444 |
N/A |
INTRINSIC |
coiled coil region
|
497 |
589 |
N/A |
INTRINSIC |
low complexity region
|
592 |
608 |
N/A |
INTRINSIC |
coiled coil region
|
613 |
678 |
N/A |
INTRINSIC |
low complexity region
|
764 |
777 |
N/A |
INTRINSIC |
low complexity region
|
856 |
869 |
N/A |
INTRINSIC |
low complexity region
|
885 |
900 |
N/A |
INTRINSIC |
low complexity region
|
1077 |
1093 |
N/A |
INTRINSIC |
Pfam:TPR_MLP1_2
|
1112 |
1240 |
5.1e-37 |
PFAM |
coiled coil region
|
1289 |
1495 |
N/A |
INTRINSIC |
low complexity region
|
1682 |
1698 |
N/A |
INTRINSIC |
internal_repeat_5
|
1703 |
1750 |
8.04e-5 |
PROSPERO |
internal_repeat_3
|
1704 |
1765 |
1.07e-5 |
PROSPERO |
low complexity region
|
1769 |
1791 |
N/A |
INTRINSIC |
low complexity region
|
1835 |
1851 |
N/A |
INTRINSIC |
internal_repeat_5
|
1857 |
1900 |
8.04e-5 |
PROSPERO |
internal_repeat_6
|
1887 |
1911 |
8.04e-5 |
PROSPERO |
internal_repeat_3
|
1893 |
1955 |
1.07e-5 |
PROSPERO |
internal_repeat_4
|
1949 |
1969 |
4.1e-5 |
PROSPERO |
internal_repeat_1
|
1967 |
1993 |
1.42e-6 |
PROSPERO |
low complexity region
|
1994 |
2007 |
N/A |
INTRINSIC |
low complexity region
|
2016 |
2055 |
N/A |
INTRINSIC |
low complexity region
|
2063 |
2088 |
N/A |
INTRINSIC |
internal_repeat_4
|
2091 |
2110 |
4.1e-5 |
PROSPERO |
internal_repeat_6
|
2108 |
2132 |
8.04e-5 |
PROSPERO |
low complexity region
|
2133 |
2152 |
N/A |
INTRINSIC |
internal_repeat_2
|
2158 |
2209 |
2.78e-6 |
PROSPERO |
internal_repeat_1
|
2228 |
2253 |
1.42e-6 |
PROSPERO |
internal_repeat_2
|
2230 |
2286 |
2.78e-6 |
PROSPERO |
low complexity region
|
2313 |
2325 |
N/A |
INTRINSIC |
low complexity region
|
2337 |
2351 |
N/A |
INTRINSIC |
low complexity region
|
2366 |
2388 |
N/A |
INTRINSIC |
low complexity region
|
2420 |
2431 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000161320
|
SMART Domains |
Protein: ENSMUSP00000124801 Gene: ENSMUSG00000006014
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
24 |
N/A |
INTRINSIC |
SO
|
25 |
67 |
3.83e-15 |
SMART |
low complexity region
|
69 |
83 |
N/A |
INTRINSIC |
low complexity region
|
100 |
110 |
N/A |
INTRINSIC |
low complexity region
|
148 |
179 |
N/A |
INTRINSIC |
|
Predicted Effect |
unknown
Transcript: ENSMUST00000161611
AA Change: M1140V
|
SMART Domains |
Protein: ENSMUSP00000125677 Gene: ENSMUSG00000006014 AA Change: M1140V
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
24 |
N/A |
INTRINSIC |
SO
|
26 |
68 |
9.21e-18 |
SMART |
SO
|
69 |
108 |
2.77e-12 |
SMART |
low complexity region
|
110 |
122 |
N/A |
INTRINSIC |
low complexity region
|
127 |
184 |
N/A |
INTRINSIC |
low complexity region
|
191 |
212 |
N/A |
INTRINSIC |
low complexity region
|
229 |
239 |
N/A |
INTRINSIC |
internal_repeat_3
|
244 |
271 |
7.42e-5 |
PROSPERO |
low complexity region
|
277 |
309 |
N/A |
INTRINSIC |
Pfam:Cornifin
|
578 |
691 |
2.2e-9 |
PFAM |
internal_repeat_3
|
796 |
825 |
7.42e-5 |
PROSPERO |
internal_repeat_2
|
797 |
823 |
1.24e-5 |
PROSPERO |
low complexity region
|
826 |
879 |
N/A |
INTRINSIC |
internal_repeat_2
|
889 |
915 |
1.24e-5 |
PROSPERO |
HX
|
967 |
1009 |
1.67e-7 |
SMART |
HX
|
1011 |
1054 |
3.76e-10 |
SMART |
Blast:HX
|
1167 |
1220 |
6e-27 |
BLAST |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000162367
AA Change: M342V
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000125551 Gene: ENSMUSG00000006014 AA Change: M342V
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
24 |
N/A |
INTRINSIC |
SO
|
26 |
68 |
9.21e-18 |
SMART |
SO
|
69 |
108 |
4.21e-12 |
SMART |
low complexity region
|
110 |
124 |
N/A |
INTRINSIC |
HX
|
169 |
211 |
1.67e-7 |
SMART |
HX
|
213 |
256 |
3.76e-10 |
SMART |
Blast:HX
|
369 |
422 |
2e-27 |
BLAST |
|
Predicted Effect |
unknown
Transcript: ENSMUST00000164600
AA Change: M1140V
|
SMART Domains |
Protein: ENSMUSP00000128943 Gene: ENSMUSG00000006014 AA Change: M1140V
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
24 |
N/A |
INTRINSIC |
SO
|
26 |
68 |
9.21e-18 |
SMART |
SO
|
69 |
108 |
2.77e-12 |
SMART |
low complexity region
|
110 |
122 |
N/A |
INTRINSIC |
low complexity region
|
127 |
184 |
N/A |
INTRINSIC |
low complexity region
|
191 |
212 |
N/A |
INTRINSIC |
low complexity region
|
229 |
239 |
N/A |
INTRINSIC |
internal_repeat_3
|
244 |
271 |
7.42e-5 |
PROSPERO |
low complexity region
|
277 |
309 |
N/A |
INTRINSIC |
Pfam:Cornifin
|
404 |
497 |
2.4e-14 |
PFAM |
Pfam:Cornifin
|
468 |
584 |
3.2e-15 |
PFAM |
Pfam:Cornifin
|
550 |
648 |
3.3e-16 |
PFAM |
Pfam:Cornifin
|
625 |
722 |
2.1e-15 |
PFAM |
Pfam:Cornifin
|
647 |
743 |
7.8e-16 |
PFAM |
Pfam:Cornifin
|
706 |
822 |
1.4e-12 |
PFAM |
low complexity region
|
826 |
879 |
N/A |
INTRINSIC |
internal_repeat_2
|
889 |
915 |
1.24e-5 |
PROSPERO |
HX
|
967 |
1009 |
1.67e-7 |
SMART |
HX
|
1011 |
1054 |
3.76e-10 |
SMART |
Blast:HX
|
1167 |
1220 |
6e-27 |
BLAST |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.6%
- 20x: 98.9%
|
Validation Efficiency |
|
MGI Phenotype |
PHENOTYPE: Aging homozygous null mice develop a hopping gait, irregular endochondral growth plates, altered cartilage surface, camptodactyly, progressive synovial hyperplasia and, ultimately, joint failure. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 63 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4930433I11Rik |
A |
T |
7: 40,643,212 (GRCm39) |
I294L |
probably benign |
Het |
Ankrd35 |
A |
T |
3: 96,589,343 (GRCm39) |
K187N |
probably damaging |
Het |
Arhgap40 |
C |
T |
2: 158,391,571 (GRCm39) |
T631M |
possibly damaging |
Het |
Arpin |
T |
C |
7: 79,584,979 (GRCm39) |
Y5C |
probably damaging |
Het |
B020011L13Rik |
A |
G |
1: 117,728,724 (GRCm39) |
Y77C |
|
Het |
Cdk17 |
A |
G |
10: 93,044,066 (GRCm39) |
K2E |
probably damaging |
Het |
Cdk18 |
A |
G |
1: 132,049,260 (GRCm39) |
F86L |
probably benign |
Het |
Cfap418 |
A |
G |
4: 10,893,271 (GRCm39) |
D130G |
probably damaging |
Het |
Clca4a |
T |
C |
3: 144,659,532 (GRCm39) |
T775A |
probably damaging |
Het |
Clvs2 |
T |
A |
10: 33,389,301 (GRCm39) |
D313V |
possibly damaging |
Het |
Col6a5 |
T |
C |
9: 105,741,788 (GRCm39) |
Y2377C |
probably damaging |
Het |
Drd2 |
T |
C |
9: 49,311,094 (GRCm39) |
V115A |
probably damaging |
Het |
Dsp |
A |
G |
13: 38,377,218 (GRCm39) |
R1668G |
probably benign |
Het |
Eif2d |
T |
A |
1: 131,082,962 (GRCm39) |
V102E |
probably damaging |
Het |
Fmo4 |
A |
G |
1: 162,631,337 (GRCm39) |
V210A |
probably damaging |
Het |
Galntl5 |
A |
G |
5: 25,415,437 (GRCm39) |
R323G |
probably damaging |
Het |
Git2 |
T |
C |
5: 114,904,533 (GRCm39) |
T129A |
probably benign |
Het |
Gm572 |
A |
G |
4: 148,752,913 (GRCm39) |
H264R |
possibly damaging |
Het |
Hnrnpll |
T |
C |
17: 80,369,385 (GRCm39) |
T13A |
unknown |
Het |
Ighv7-4 |
T |
C |
12: 114,186,619 (GRCm39) |
Y51C |
probably damaging |
Het |
Irag2 |
G |
A |
6: 145,113,753 (GRCm39) |
R307Q |
probably damaging |
Het |
Jam2 |
A |
G |
16: 84,619,676 (GRCm39) |
D289G |
probably damaging |
Het |
Krt27 |
A |
G |
11: 99,239,535 (GRCm39) |
|
probably null |
Het |
Lama5 |
T |
C |
2: 179,823,234 (GRCm39) |
N2704S |
possibly damaging |
Het |
Lhx8 |
A |
T |
3: 154,033,764 (GRCm39) |
S70T |
possibly damaging |
Het |
Lmo7 |
C |
A |
14: 102,122,783 (GRCm39) |
T324N |
possibly damaging |
Het |
Man2a1 |
A |
G |
17: 65,040,734 (GRCm39) |
T907A |
possibly damaging |
Het |
Map3k4 |
C |
T |
17: 12,489,860 (GRCm39) |
A524T |
probably damaging |
Het |
Mga |
C |
T |
2: 119,795,304 (GRCm39) |
A2996V |
possibly damaging |
Het |
Mybpc1 |
A |
T |
10: 88,379,624 (GRCm39) |
M625K |
possibly damaging |
Het |
Ncald |
T |
A |
15: 37,372,369 (GRCm39) |
N159Y |
probably damaging |
Het |
Nfasc |
T |
C |
1: 132,527,866 (GRCm39) |
T832A |
possibly damaging |
Het |
P2rx5 |
T |
A |
11: 73,056,427 (GRCm39) |
I117N |
|
Het |
Pcdhb3 |
C |
A |
18: 37,435,416 (GRCm39) |
R461S |
possibly damaging |
Het |
Polr1b |
T |
C |
2: 128,967,417 (GRCm39) |
S937P |
probably damaging |
Het |
Prep |
C |
A |
10: 44,996,807 (GRCm39) |
Q362K |
|
Het |
Prr14 |
A |
T |
7: 127,073,687 (GRCm39) |
T184S |
possibly damaging |
Het |
Prss58 |
A |
G |
6: 40,874,382 (GRCm39) |
I98T |
probably benign |
Het |
Pum3 |
T |
C |
19: 27,394,188 (GRCm39) |
T361A |
probably damaging |
Het |
Rsf1 |
GCGGCGGCG |
GCGGCGGCGTCGGCGGCG |
7: 97,229,129 (GRCm39) |
|
probably benign |
Het |
Sema4c |
A |
G |
1: 36,591,067 (GRCm39) |
V424A |
probably benign |
Het |
Sema6a |
A |
T |
18: 47,437,216 (GRCm39) |
I58N |
probably damaging |
Het |
Slc13a3 |
T |
A |
2: 165,250,851 (GRCm39) |
Y506F |
probably damaging |
Het |
Slc15a2 |
A |
G |
16: 36,579,651 (GRCm39) |
V365A |
probably benign |
Het |
Slc39a5 |
G |
A |
10: 128,233,628 (GRCm39) |
L290F |
probably damaging |
Het |
Spata31f1a |
A |
G |
4: 42,850,560 (GRCm39) |
V532A |
probably benign |
Het |
Taf6l |
T |
C |
19: 8,759,436 (GRCm39) |
T161A |
probably benign |
Het |
Tbl2 |
T |
A |
5: 135,187,471 (GRCm39) |
C243S |
probably benign |
Het |
Tet2 |
A |
T |
3: 133,193,103 (GRCm39) |
S444T |
probably benign |
Het |
Thoc1 |
C |
T |
18: 9,992,168 (GRCm39) |
L499F |
probably damaging |
Het |
Tnc |
A |
G |
4: 63,913,942 (GRCm39) |
V1290A |
probably damaging |
Het |
Tnpo1 |
T |
C |
13: 98,990,003 (GRCm39) |
D716G |
probably damaging |
Het |
Tpp2 |
A |
T |
1: 44,041,272 (GRCm39) |
K1236N |
probably benign |
Het |
Tshr |
T |
C |
12: 91,504,589 (GRCm39) |
V509A |
probably damaging |
Het |
U2surp |
T |
C |
9: 95,356,535 (GRCm39) |
T775A |
|
Het |
Ubap2l |
T |
C |
3: 89,928,656 (GRCm39) |
T486A |
probably benign |
Het |
Usp28 |
C |
A |
9: 48,935,288 (GRCm39) |
P457T |
probably damaging |
Het |
Usp44 |
A |
G |
10: 93,682,851 (GRCm39) |
I387V |
possibly damaging |
Het |
Vmn1r225 |
A |
G |
17: 20,722,793 (GRCm39) |
D78G |
probably damaging |
Het |
Vps13b |
T |
C |
15: 35,447,880 (GRCm39) |
M537T |
possibly damaging |
Het |
Wdr6 |
G |
A |
9: 108,453,182 (GRCm39) |
R234C |
probably damaging |
Het |
Zfp1005 |
G |
A |
2: 150,110,477 (GRCm39) |
G389D |
unknown |
Het |
Zfp949 |
C |
A |
9: 88,452,182 (GRCm39) |
T584N |
probably benign |
Het |
|
Other mutations in Prg4 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00493:Prg4
|
APN |
1 |
150,327,671 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02033:Prg4
|
APN |
1 |
150,331,619 (GRCm39) |
intron |
probably benign |
|
IGL02154:Prg4
|
APN |
1 |
150,330,613 (GRCm39) |
intron |
probably benign |
|
IGL03111:Prg4
|
APN |
1 |
150,327,653 (GRCm39) |
missense |
probably benign |
0.06 |
IGL03177:Prg4
|
APN |
1 |
150,331,354 (GRCm39) |
intron |
probably benign |
|
IGL03260:Prg4
|
APN |
1 |
150,331,378 (GRCm39) |
intron |
probably benign |
|
IGL03281:Prg4
|
APN |
1 |
150,325,839 (GRCm39) |
splice site |
probably benign |
|
R0046:Prg4
|
UTSW |
1 |
150,331,837 (GRCm39) |
missense |
possibly damaging |
0.53 |
R0046:Prg4
|
UTSW |
1 |
150,331,837 (GRCm39) |
missense |
possibly damaging |
0.53 |
R0196:Prg4
|
UTSW |
1 |
150,330,243 (GRCm39) |
intron |
probably benign |
|
R0233:Prg4
|
UTSW |
1 |
150,329,298 (GRCm39) |
splice site |
probably benign |
|
R0255:Prg4
|
UTSW |
1 |
150,331,558 (GRCm39) |
intron |
probably benign |
|
R0616:Prg4
|
UTSW |
1 |
150,336,462 (GRCm39) |
missense |
probably damaging |
1.00 |
R1016:Prg4
|
UTSW |
1 |
150,330,442 (GRCm39) |
intron |
probably benign |
|
R1826:Prg4
|
UTSW |
1 |
150,327,760 (GRCm39) |
missense |
probably benign |
0.09 |
R1862:Prg4
|
UTSW |
1 |
150,336,420 (GRCm39) |
missense |
probably damaging |
0.99 |
R1863:Prg4
|
UTSW |
1 |
150,336,420 (GRCm39) |
missense |
probably damaging |
0.99 |
R1922:Prg4
|
UTSW |
1 |
150,325,750 (GRCm39) |
nonsense |
probably null |
|
R1940:Prg4
|
UTSW |
1 |
150,331,774 (GRCm39) |
missense |
possibly damaging |
0.53 |
R3765:Prg4
|
UTSW |
1 |
150,327,122 (GRCm39) |
missense |
probably damaging |
0.97 |
R3855:Prg4
|
UTSW |
1 |
150,327,751 (GRCm39) |
missense |
probably damaging |
1.00 |
R3894:Prg4
|
UTSW |
1 |
150,330,510 (GRCm39) |
intron |
probably benign |
|
R3895:Prg4
|
UTSW |
1 |
150,330,510 (GRCm39) |
intron |
probably benign |
|
R3912:Prg4
|
UTSW |
1 |
150,327,619 (GRCm39) |
missense |
probably damaging |
1.00 |
R3935:Prg4
|
UTSW |
1 |
150,333,908 (GRCm39) |
missense |
possibly damaging |
0.68 |
R4050:Prg4
|
UTSW |
1 |
150,330,510 (GRCm39) |
intron |
probably benign |
|
R4475:Prg4
|
UTSW |
1 |
150,330,610 (GRCm39) |
intron |
probably benign |
|
R4794:Prg4
|
UTSW |
1 |
150,330,297 (GRCm39) |
intron |
probably benign |
|
R4910:Prg4
|
UTSW |
1 |
150,331,574 (GRCm39) |
intron |
probably benign |
|
R4911:Prg4
|
UTSW |
1 |
150,331,574 (GRCm39) |
intron |
probably benign |
|
R4993:Prg4
|
UTSW |
1 |
150,336,432 (GRCm39) |
missense |
probably damaging |
1.00 |
R5378:Prg4
|
UTSW |
1 |
150,330,977 (GRCm39) |
intron |
probably benign |
|
R5381:Prg4
|
UTSW |
1 |
150,330,204 (GRCm39) |
intron |
probably benign |
|
R5452:Prg4
|
UTSW |
1 |
150,331,519 (GRCm39) |
intron |
probably benign |
|
R5870:Prg4
|
UTSW |
1 |
150,331,300 (GRCm39) |
nonsense |
probably null |
|
R5888:Prg4
|
UTSW |
1 |
150,328,101 (GRCm39) |
missense |
probably damaging |
1.00 |
R5929:Prg4
|
UTSW |
1 |
150,329,880 (GRCm39) |
missense |
probably benign |
0.01 |
R6058:Prg4
|
UTSW |
1 |
150,327,197 (GRCm39) |
missense |
probably damaging |
0.99 |
R6059:Prg4
|
UTSW |
1 |
150,325,748 (GRCm39) |
missense |
possibly damaging |
0.67 |
R6232:Prg4
|
UTSW |
1 |
150,331,567 (GRCm39) |
intron |
probably benign |
|
R6272:Prg4
|
UTSW |
1 |
150,330,517 (GRCm39) |
intron |
probably benign |
|
R6459:Prg4
|
UTSW |
1 |
150,330,052 (GRCm39) |
intron |
probably benign |
|
R6659:Prg4
|
UTSW |
1 |
150,336,432 (GRCm39) |
missense |
probably damaging |
1.00 |
R6663:Prg4
|
UTSW |
1 |
150,330,852 (GRCm39) |
intron |
probably benign |
|
R6882:Prg4
|
UTSW |
1 |
150,329,246 (GRCm39) |
missense |
probably damaging |
1.00 |
R6970:Prg4
|
UTSW |
1 |
150,331,657 (GRCm39) |
intron |
probably benign |
|
R7078:Prg4
|
UTSW |
1 |
150,334,014 (GRCm39) |
missense |
possibly damaging |
0.91 |
R7102:Prg4
|
UTSW |
1 |
150,328,005 (GRCm39) |
missense |
probably damaging |
1.00 |
R7264:Prg4
|
UTSW |
1 |
150,329,818 (GRCm39) |
missense |
not run |
|
R7487:Prg4
|
UTSW |
1 |
150,331,656 (GRCm39) |
missense |
unknown |
|
R7531:Prg4
|
UTSW |
1 |
150,330,786 (GRCm39) |
missense |
unknown |
|
R7651:Prg4
|
UTSW |
1 |
150,330,696 (GRCm39) |
missense |
unknown |
|
R7701:Prg4
|
UTSW |
1 |
150,333,293 (GRCm39) |
missense |
possibly damaging |
0.53 |
R8072:Prg4
|
UTSW |
1 |
150,331,774 (GRCm39) |
missense |
possibly damaging |
0.53 |
R8168:Prg4
|
UTSW |
1 |
150,331,601 (GRCm39) |
missense |
unknown |
|
R8248:Prg4
|
UTSW |
1 |
150,330,877 (GRCm39) |
missense |
unknown |
|
R8436:Prg4
|
UTSW |
1 |
150,331,318 (GRCm39) |
missense |
unknown |
|
R8460:Prg4
|
UTSW |
1 |
150,331,692 (GRCm39) |
missense |
possibly damaging |
0.83 |
R8514:Prg4
|
UTSW |
1 |
150,330,396 (GRCm39) |
missense |
unknown |
|
R8904:Prg4
|
UTSW |
1 |
150,331,810 (GRCm39) |
missense |
possibly damaging |
0.83 |
R9072:Prg4
|
UTSW |
1 |
150,331,288 (GRCm39) |
missense |
unknown |
|
R9073:Prg4
|
UTSW |
1 |
150,331,288 (GRCm39) |
missense |
unknown |
|
R9274:Prg4
|
UTSW |
1 |
150,331,924 (GRCm39) |
missense |
possibly damaging |
0.53 |
R9337:Prg4
|
UTSW |
1 |
150,327,116 (GRCm39) |
missense |
probably damaging |
1.00 |
R9613:Prg4
|
UTSW |
1 |
150,331,660 (GRCm39) |
missense |
unknown |
|
R9670:Prg4
|
UTSW |
1 |
150,326,618 (GRCm39) |
missense |
probably benign |
0.01 |
X0024:Prg4
|
UTSW |
1 |
150,330,243 (GRCm39) |
intron |
probably benign |
|
|
Predicted Primers |
PCR Primer
(F):5'- AGGGCTGTCTTGAGGGATACAG -3'
(R):5'- GGCAACATTCAGCAGTACAC -3'
Sequencing Primer
(F):5'- TGGTCTTAGTTATTACTCAGTAAGGC -3'
(R):5'- TCAGCAGTACACTTATAAACAGGAG -3'
|
Posted On |
2022-07-18 |