Mutagenetix > Incidental Mutation

Incidental Mutation 'R9569:Spata31g1'

721824

Institutional Source

Beutler Lab

Gene Symbol

Spata31g1

Ensembl Gene

ENSMUSG00000028451

Gene Name

SPATA31 subfamily G member 1

Synonyms

1700022I11Rik

MMRRC Submission

068966-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.052) question?

Stock #

R9569 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

42969946-42974325 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to C at 42971740 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Leucine at position 358 (V358L)

Ref Sequence

ENSEMBL: ENSMUSP00000030163 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000030163] [ENSMUST00000139127] [ENSMUST00000185904] [ENSMUST00000190902]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000030163
AA Change: V358L

PolyPhen 2 Score 0.098 (Sensitivity: 0.93; Specificity: 0.85)

SMART Domains

Protein: ENSMUSP00000030163
Gene: ENSMUSG00000028451
AA Change: V358L

Domain	Start	End	E-Value	Type
low complexity region	38	55	N/A	INTRINSIC
low complexity region	85	93	N/A	INTRINSIC
low complexity region	253	269	N/A	INTRINSIC
internal_repeat_1	322	432	6.53e-5	PROSPERO
low complexity region	434	449	N/A	INTRINSIC
low complexity region	507	521	N/A	INTRINSIC
low complexity region	599	610	N/A	INTRINSIC
internal_repeat_1	622	738	6.53e-5	PROSPERO
low complexity region	847	861	N/A	INTRINSIC
low complexity region	897	908	N/A	INTRINSIC
low complexity region	914	925	N/A	INTRINSIC
low complexity region	944	958	N/A	INTRINSIC
low complexity region	990	1001	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000139127

SMART Domains

Protein: ENSMUSP00000116415
Gene: ENSMUSG00000028451

Domain	Start	End	E-Value	Type
low complexity region	38	55	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000185904

SMART Domains

Protein: ENSMUSP00000140492
Gene: ENSMUSG00000028451

Domain	Start	End	E-Value	Type
low complexity region	25	33	N/A	INTRINSIC
Pfam:FAM75	99	149	2e-5	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000190902

SMART Domains

Protein: ENSMUSP00000140363
Gene: ENSMUSG00000028451

Domain	Start	End	E-Value	Type
low complexity region	49	57	N/A	INTRINSIC
low complexity region	217	233	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 98.9%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 76 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abi2	T	A	1: 60,503,763 (GRCm39)	V356D	probably damaging	Het
Adgrd1	T	C	5: 129,256,701 (GRCm39)	V690A	possibly damaging	Het
Apba2	T	C	7: 64,393,138 (GRCm39)	M553T	possibly damaging	Het
Apeh	C	T	9: 107,971,609 (GRCm39)	V13M	unknown	Het
Apol11b	C	T	15: 77,524,771 (GRCm39)	E5K	possibly damaging	Het
Apol7e	C	T	15: 77,601,933 (GRCm39)	T177I	probably damaging	Het
Bltp1	T	C	3: 37,066,770 (GRCm39)	M211T		Het
Bub1b	T	C	2: 118,468,884 (GRCm39)	I883T	probably damaging	Het
C9	T	C	15: 6,489,062 (GRCm39)	S140P	probably damaging	Het
Cbfa2t2	T	A	2: 154,346,485 (GRCm39)	I64N	probably benign	Het
Cd180	A	T	13: 102,842,486 (GRCm39)	I511F	possibly damaging	Het
Cic	T	C	7: 24,972,120 (GRCm39)	V617A	possibly damaging	Het
Clca3a2	A	C	3: 144,513,075 (GRCm39)		probably null	Het
D5Ertd579e	T	C	5: 36,759,979 (GRCm39)	T1394A	probably damaging	Het
Dclk1	A	T	3: 55,387,852 (GRCm39)	E422D	probably benign	Het
Depdc5	A	T	5: 33,025,321 (GRCm39)	D21V	probably damaging	Het
Dis3l	A	G	9: 64,236,829 (GRCm39)	F40S	unknown	Het
Duox1	T	C	2: 122,148,971 (GRCm39)	V82A	probably benign	Het
Dus2	T	C	8: 106,771,507 (GRCm39)	V211A	probably damaging	Het
Eif2ak4	G	A	2: 118,251,316 (GRCm39)	S326N	probably benign	Het
Fat3	A	C	9: 15,830,495 (GRCm39)	L153R		Het
Gpx8	C	T	13: 113,182,125 (GRCm39)	V103I	probably damaging	Het
Gtf2a1l	A	G	17: 89,001,948 (GRCm39)	D268G	probably benign	Het
Hc	T	C	2: 34,926,359 (GRCm39)	I342V	probably benign	Het
Hsp90ab1	T	A	17: 45,879,878 (GRCm39)	D546V	possibly damaging	Het
Ifi206	T	G	1: 173,314,209 (GRCm39)	D77A		Het
Igfbp1	A	G	11: 7,147,881 (GRCm39)		probably benign	Het
Kdm3a	T	C	6: 71,584,434 (GRCm39)	D559G	probably benign	Het
Kif2a	A	G	13: 107,105,246 (GRCm39)	I565T	probably benign	Het
Krt1c	T	C	15: 101,724,924 (GRCm39)	T229A	probably damaging	Het
Lcmt2	G	A	2: 120,970,522 (GRCm39)	A187V	probably damaging	Het
Mapk8ip1	A	G	2: 92,217,599 (GRCm39)	M241T	probably benign	Het
Mup15	T	C	4: 61,357,875 (GRCm39)		probably benign	Het
Myo9b	T	C	8: 71,811,629 (GRCm39)	V1912A	probably benign	Het
Naip5	T	A	13: 100,356,338 (GRCm39)	E1092D	probably benign	Het
Naip5	T	C	13: 100,359,821 (GRCm39)	T472A	probably benign	Het
Net1	A	G	13: 3,938,518 (GRCm39)	F123S	probably benign	Het
Or1j8	T	C	2: 36,191,946 (GRCm39)	Y132H	probably damaging	Het
Or52n2	C	T	7: 104,542,525 (GRCm39)	M103I	possibly damaging	Het
Or5h17	A	G	16: 58,820,228 (GRCm39)	Y60C	probably damaging	Het
Pcdhb13	T	C	18: 37,576,153 (GRCm39)	F177S	probably damaging	Het
Pclo	T	C	5: 14,907,065 (GRCm39)		probably null	Het
Perm1	A	G	4: 156,303,039 (GRCm39)	T528A	probably benign	Het
Pik3c2a	C	T	7: 115,957,939 (GRCm39)	A1116T	possibly damaging	Het
Prox2	G	A	12: 85,141,766 (GRCm39)	Q146*	probably null	Het
Psd	A	T	19: 46,308,717 (GRCm39)	C639S	possibly damaging	Het
Rffl	T	A	11: 82,703,264 (GRCm39)	T220S	probably benign	Het
Scn2a	A	G	2: 65,560,622 (GRCm39)	D1284G	probably damaging	Het
Scube1	T	C	15: 83,513,605 (GRCm39)	Y385C	probably damaging	Het
Sec14l3	A	T	11: 4,026,324 (GRCm39)	D388V	probably damaging	Het
Slc26a1	G	T	5: 108,819,460 (GRCm39)	Q596K	probably benign	Het
Slc6a19	T	C	13: 73,834,030 (GRCm39)	T343A	probably benign	Het
Slc7a4	A	G	16: 17,393,262 (GRCm39)	V179A		Het
Sox14	T	G	9: 99,757,562 (GRCm39)	D49A		Het
Timm22	A	G	11: 76,298,196 (GRCm39)	S56G	probably benign	Het
Tmub2	G	A	11: 102,179,153 (GRCm39)	W322*	probably null	Het
Tsc22d4	A	G	5: 137,756,428 (GRCm39)	T8A	probably benign	Het
Ttn	T	C	2: 76,539,652 (GRCm39)	I34445V	probably benign	Het
Tyms	A	T	5: 30,268,360 (GRCm39)	Y196*	probably null	Het
Ube2o	G	A	11: 116,434,823 (GRCm39)	T546M	probably damaging	Het
Umodl1	A	G	17: 31,217,143 (GRCm39)	Y1125C	probably damaging	Het
Unc13b	CGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGC	CGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGC	4: 43,177,312 (GRCm39)		probably benign	Het
Unk	A	T	11: 115,950,035 (GRCm39)	Q747L	probably damaging	Het
Vmn1r170	A	G	7: 23,306,294 (GRCm39)	E232G	probably benign	Het
Vps41	A	G	13: 19,013,396 (GRCm39)	Y338C	possibly damaging	Het
Washc5	T	C	15: 59,215,980 (GRCm39)	M800V	probably benign	Het
Wt1	T	A	2: 104,993,711 (GRCm39)	I348N	possibly damaging	Het
Xirp2	A	G	2: 67,341,242 (GRCm39)	Y1161C	probably damaging	Het
Xpo7	A	G	14: 70,906,140 (GRCm39)	M1001T	possibly damaging	Het
Yeats2	A	T	16: 19,972,902 (GRCm39)	R19W	probably damaging	Het
Zfp142	T	C	1: 74,615,386 (GRCm39)	T476A	probably damaging	Het
Zfp229	T	C	17: 21,964,573 (GRCm39)	W268R	possibly damaging	Het
Zfp473	A	G	7: 44,388,971 (GRCm39)	F50S	probably damaging	Het
Zfp975	A	T	7: 42,311,413 (GRCm39)	M400K	probably benign	Het
Zkscan5	A	G	5: 145,144,419 (GRCm39)	M150V	probably benign	Het
Znfx1	T	A	2: 166,897,875 (GRCm39)	I350F		Het

Other mutations in Spata31g1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00161:Spata31g1	APN	4	42,973,982 (GRCm39)	missense	probably benign	0.40
IGL01340:Spata31g1	APN	4	42,971,984 (GRCm39)	missense	possibly damaging	0.94
IGL02078:Spata31g1	APN	4	42,972,685 (GRCm39)	missense	possibly damaging	0.71
IGL02082:Spata31g1	APN	4	42,970,198 (GRCm39)	missense	probably benign	0.00
IGL02993:Spata31g1	APN	4	42,971,719 (GRCm39)	missense	probably damaging	0.99
IGL03174:Spata31g1	APN	4	42,970,975 (GRCm39)	missense	probably benign	0.00
IGL03188:Spata31g1	APN	4	42,971,225 (GRCm39)	missense	possibly damaging	0.56
R0031:Spata31g1	UTSW	4	42,973,712 (GRCm39)	missense	probably damaging	0.99
R0179:Spata31g1	UTSW	4	42,972,214 (GRCm39)	missense	probably benign	0.00
R0409:Spata31g1	UTSW	4	42,972,203 (GRCm39)	missense	probably damaging	0.98
R0422:Spata31g1	UTSW	4	42,972,199 (GRCm39)	missense	possibly damaging	0.95
R0462:Spata31g1	UTSW	4	42,973,429 (GRCm39)	missense	probably benign
R0467:Spata31g1	UTSW	4	42,972,715 (GRCm39)	missense	probably benign
R0677:Spata31g1	UTSW	4	42,970,952 (GRCm39)	nonsense	probably null
R0723:Spata31g1	UTSW	4	42,971,691 (GRCm39)	missense	probably damaging	0.98
R1479:Spata31g1	UTSW	4	42,972,543 (GRCm39)	missense	possibly damaging	0.55
R1586:Spata31g1	UTSW	4	42,971,512 (GRCm39)	missense	probably benign	0.03
R1956:Spata31g1	UTSW	4	42,970,105 (GRCm39)	splice site	probably null
R2030:Spata31g1	UTSW	4	42,974,131 (GRCm39)	nonsense	probably null
R2074:Spata31g1	UTSW	4	42,974,171 (GRCm39)	missense	probably benign	0.38
R2162:Spata31g1	UTSW	4	42,972,238 (GRCm39)	missense	possibly damaging	0.59
R2419:Spata31g1	UTSW	4	42,974,146 (GRCm39)	missense	possibly damaging	0.94
R2939:Spata31g1	UTSW	4	42,972,946 (GRCm39)	missense	probably benign	0.04
R3615:Spata31g1	UTSW	4	42,971,864 (GRCm39)	missense	probably benign	0.10
R3616:Spata31g1	UTSW	4	42,971,864 (GRCm39)	missense	probably benign	0.10
R3981:Spata31g1	UTSW	4	42,971,534 (GRCm39)	missense	probably damaging	0.99
R5037:Spata31g1	UTSW	4	42,972,195 (GRCm39)	missense	probably benign
R5252:Spata31g1	UTSW	4	42,971,706 (GRCm39)	missense	probably benign	0.00
R5526:Spata31g1	UTSW	4	42,972,125 (GRCm39)	missense	possibly damaging	0.90
R5642:Spata31g1	UTSW	4	42,971,831 (GRCm39)	missense	possibly damaging	0.61
R5935:Spata31g1	UTSW	4	42,971,465 (GRCm39)	missense	probably benign
R6082:Spata31g1	UTSW	4	42,972,511 (GRCm39)	missense	probably benign	0.27
R6136:Spata31g1	UTSW	4	42,972,853 (GRCm39)	missense	probably damaging	0.96
R6361:Spata31g1	UTSW	4	42,972,695 (GRCm39)	missense	probably benign	0.05
R6494:Spata31g1	UTSW	4	42,971,924 (GRCm39)	missense	possibly damaging	0.94
R6641:Spata31g1	UTSW	4	42,971,245 (GRCm39)	missense	possibly damaging	0.90
R7289:Spata31g1	UTSW	4	42,973,252 (GRCm39)	missense	possibly damaging	0.66
R7289:Spata31g1	UTSW	4	42,972,379 (GRCm39)	missense	probably benign	0.00
R7777:Spata31g1	UTSW	4	42,971,095 (GRCm39)	missense	probably benign
R7777:Spata31g1	UTSW	4	42,970,171 (GRCm39)	nonsense	probably null
R7893:Spata31g1	UTSW	4	42,971,539 (GRCm39)	missense	probably damaging	0.99
R8066:Spata31g1	UTSW	4	42,971,929 (GRCm39)	missense	possibly damaging	0.66
R8311:Spata31g1	UTSW	4	42,973,169 (GRCm39)	missense	probably benign	0.19
R8706:Spata31g1	UTSW	4	42,971,776 (GRCm39)	missense	probably benign	0.02
R8743:Spata31g1	UTSW	4	42,971,030 (GRCm39)	missense	probably benign	0.00
R8774:Spata31g1	UTSW	4	42,971,087 (GRCm39)	missense	probably damaging	1.00
R8774-TAIL:Spata31g1	UTSW	4	42,971,087 (GRCm39)	missense	probably damaging	1.00
R8806:Spata31g1	UTSW	4	42,971,261 (GRCm39)	missense	probably benign	0.37
R8916:Spata31g1	UTSW	4	42,973,034 (GRCm39)	missense	probably damaging	1.00
R8927:Spata31g1	UTSW	4	42,972,251 (GRCm39)	missense	probably benign	0.00
R8928:Spata31g1	UTSW	4	42,972,251 (GRCm39)	missense	probably benign	0.00
R8947:Spata31g1	UTSW	4	42,972,097 (GRCm39)	missense	probably benign	0.17
R9193:Spata31g1	UTSW	4	42,971,519 (GRCm39)	missense	probably benign	0.01

Predicted Primers

PCR Primer
(F):5'- AGCACCCGGTTCTCAACTAG -3'
(R):5'- CACTGTGGTTTGGCAGAGAG -3'

Sequencing Primer
(F):5'- CAGAACAAAGAGGTTCCTTCTGTCTC -3'
(R):5'- CAGAGAGTTTTCACTTGAGACAGGTC -3'

Posted On

2022-08-09