Incidental Mutation 'R9578:Pask'
| ID |
722390 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Pask
|
| Ensembl Gene |
ENSMUSG00000026274 |
| Gene Name |
PAS domain containing serine/threonine kinase |
| Synonyms |
Paskin |
| MMRRC Submission |
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.085)
|
| Stock # |
R9578 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Not validated
|
| Chromosome |
1 |
| Chromosomal Location |
93237159-93271244 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to A
at 93263390 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Serine to Leucine
at position 122
(S122L)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000027493
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000027493]
[ENSMUST00000128253]
|
| AlphaFold |
Q8CEE6 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000027493
AA Change: S122L
PolyPhen 2
Score 0.005 (Sensitivity: 0.97; Specificity: 0.74)
|
| SMART Domains |
Protein: ENSMUSP00000027493
Gene: ENSMUSG00000026274
AA Change: S122L
| Domain | Start | End | E-Value | Type |
|---|
|
PAS
|
119 |
186 |
3.87e-8 |
SMART |
|
PAS
|
333 |
400 |
3.08e-2 |
SMART |
|
low complexity region
|
907 |
918 |
N/A |
INTRINSIC |
|
low complexity region
|
1043 |
1054 |
N/A |
INTRINSIC |
|
S_TKc
|
1059 |
1311 |
8.16e-79 |
SMART |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000128253
|
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.7%
- 20x: 99.0%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the serine/threonine kinase family that contains two PAS domains. Expression of this gene is regulated by glucose, and the encoded protein plays a role in the regulation of insulin gene expression. Downregulation of this gene may play a role in type 2 diabetes. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Nov 2011]
PHENOTYPE: Homozygous null mice display resistance to diet-induced obesity, impaired glucose stimulated insulin secretion, abnormal energy balance, and abnormalities in hypoxia induced changes in ventialtion. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 53 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 4933405L10Rik |
G |
A |
8: 106,436,505 (GRCm39) |
G234S |
probably damaging |
Het |
| Aipl1 |
C |
T |
11: 71,928,253 (GRCm39) |
G11D |
probably damaging |
Het |
| Aldh8a1 |
A |
G |
10: 21,253,281 (GRCm39) |
I14M |
probably damaging |
Het |
| Arhgap11a |
A |
G |
2: 113,670,125 (GRCm39) |
S333P |
possibly damaging |
Het |
| Atp1b3 |
A |
T |
9: 96,220,754 (GRCm39) |
D180E |
probably benign |
Het |
| B3gnt8 |
T |
C |
7: 25,328,089 (GRCm39) |
L173P |
probably damaging |
Het |
| Cabin1 |
A |
G |
10: 75,590,185 (GRCm39) |
F37S |
probably damaging |
Het |
| Carmil3 |
G |
T |
14: 55,741,293 (GRCm39) |
|
probably null |
Het |
| Cfi |
G |
T |
3: 129,659,024 (GRCm39) |
M327I |
probably benign |
Het |
| Cltc |
G |
A |
11: 86,593,237 (GRCm39) |
S1542F |
probably benign |
Het |
| Col7a1 |
G |
A |
9: 108,789,350 (GRCm39) |
G854D |
unknown |
Het |
| Cux1 |
A |
T |
5: 136,282,919 (GRCm39) |
|
probably null |
Het |
| Dcdc2c |
G |
T |
12: 28,602,234 (GRCm39) |
N23K |
probably damaging |
Het |
| Dclre1a |
A |
G |
19: 56,528,734 (GRCm39) |
I807T |
probably damaging |
Het |
| Dnah14 |
T |
C |
1: 181,502,007 (GRCm39) |
F1770L |
probably benign |
Het |
| Dnajc13 |
A |
G |
9: 104,115,726 (GRCm39) |
F28L |
probably benign |
Het |
| Dtna |
A |
G |
18: 23,728,612 (GRCm39) |
D269G |
probably damaging |
Het |
| Dusp4 |
G |
T |
8: 35,274,822 (GRCm39) |
|
probably benign |
Het |
| Ece1 |
T |
C |
4: 137,641,133 (GRCm39) |
S19P |
probably benign |
Het |
| Gas1 |
T |
C |
13: 60,323,905 (GRCm39) |
D243G |
possibly damaging |
Het |
| Ggnbp2 |
A |
G |
11: 84,744,989 (GRCm39) |
C178R |
probably benign |
Het |
| Gm12185 |
T |
A |
11: 48,806,408 (GRCm39) |
N261I |
probably benign |
Het |
| Grm4 |
A |
T |
17: 27,669,183 (GRCm39) |
F362I |
possibly damaging |
Het |
| Icos |
T |
A |
1: 61,032,871 (GRCm39) |
N23K |
probably benign |
Het |
| Kcnk2 |
CAAA |
CAA |
1: 188,988,891 (GRCm39) |
|
probably null |
Het |
| Krt5 |
T |
C |
15: 101,620,153 (GRCm39) |
K188R |
probably damaging |
Het |
| Mindy3 |
C |
T |
2: 12,361,715 (GRCm39) |
|
probably null |
Het |
| Ncdn |
C |
T |
4: 126,645,795 (GRCm39) |
R38H |
probably damaging |
Het |
| Nol9 |
A |
G |
4: 152,125,706 (GRCm39) |
K219R |
probably benign |
Het |
| Opalin |
A |
T |
19: 41,060,668 (GRCm39) |
S2R |
probably damaging |
Het |
| Or8g35 |
A |
T |
9: 39,381,201 (GRCm39) |
S274T |
probably damaging |
Het |
| Pcdha11 |
T |
C |
18: 37,140,176 (GRCm39) |
S602P |
probably damaging |
Het |
| Pclo |
A |
G |
5: 14,816,753 (GRCm39) |
K1271R |
|
Het |
| Piezo1 |
T |
C |
8: 123,224,214 (GRCm39) |
H763R |
|
Het |
| Pigr |
A |
G |
1: 130,777,350 (GRCm39) |
K719E |
probably benign |
Het |
| Piwil4 |
A |
T |
9: 14,638,790 (GRCm39) |
V245E |
probably damaging |
Het |
| Plcb4 |
A |
G |
2: 135,829,444 (GRCm39) |
M925V |
probably benign |
Het |
| Pomt1 |
G |
A |
2: 32,133,543 (GRCm39) |
|
probably null |
Het |
| Pou2f2 |
C |
A |
7: 24,796,569 (GRCm39) |
A302S |
probably benign |
Het |
| Rapgef4 |
A |
T |
2: 72,026,052 (GRCm39) |
H359L |
probably damaging |
Het |
| Rfesd |
C |
T |
13: 76,156,299 (GRCm39) |
V36I |
possibly damaging |
Het |
| Rims1 |
G |
A |
1: 22,523,823 (GRCm39) |
T421M |
probably damaging |
Het |
| Serpinf2 |
T |
A |
11: 75,327,615 (GRCm39) |
H150L |
probably benign |
Het |
| Syt10 |
A |
T |
15: 89,675,122 (GRCm39) |
M408K |
possibly damaging |
Het |
| Tcea1 |
T |
A |
1: 4,961,021 (GRCm39) |
|
probably null |
Het |
| Tia1 |
T |
C |
6: 86,407,347 (GRCm39) |
*387R |
probably null |
Het |
| Top3a |
A |
C |
11: 60,647,517 (GRCm39) |
V186G |
probably damaging |
Het |
| Upk3b |
T |
A |
5: 136,067,736 (GRCm39) |
S27R |
unknown |
Het |
| Usp18 |
A |
G |
6: 121,239,726 (GRCm39) |
S274G |
probably benign |
Het |
| Vmn1r230 |
C |
A |
17: 21,067,163 (GRCm39) |
C117* |
probably null |
Het |
| Vmn1r72 |
T |
C |
7: 11,404,347 (GRCm39) |
I34V |
probably benign |
Het |
| Vmn2r74 |
T |
C |
7: 85,606,101 (GRCm39) |
D415G |
probably benign |
Het |
| Zfp54 |
A |
G |
17: 21,655,186 (GRCm39) |
Y560C |
probably damaging |
Het |
|
| Other mutations in Pask |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01366:Pask
|
APN |
1 |
93,238,574 (GRCm39) |
missense |
probably benign |
0.02 |
|
IGL01620:Pask
|
APN |
1 |
93,237,844 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
IGL01959:Pask
|
APN |
1 |
93,262,329 (GRCm39) |
missense |
probably benign |
0.03 |
|
IGL02170:Pask
|
APN |
1 |
93,238,606 (GRCm39) |
missense |
possibly damaging |
0.69 |
|
IGL02499:Pask
|
APN |
1 |
93,248,817 (GRCm39) |
nonsense |
probably null |
|
|
IGL02670:Pask
|
APN |
1 |
93,238,540 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03066:Pask
|
APN |
1 |
93,258,588 (GRCm39) |
missense |
probably benign |
0.02 |
|
IGL03210:Pask
|
APN |
1 |
93,247,714 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R0472:Pask
|
UTSW |
1 |
93,248,639 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0524:Pask
|
UTSW |
1 |
93,238,556 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0854:Pask
|
UTSW |
1 |
93,255,156 (GRCm39) |
missense |
possibly damaging |
0.79 |
|
R0854:Pask
|
UTSW |
1 |
93,255,122 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0854:Pask
|
UTSW |
1 |
93,255,134 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0863:Pask
|
UTSW |
1 |
93,242,061 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1052:Pask
|
UTSW |
1 |
93,258,549 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1406:Pask
|
UTSW |
1 |
93,249,373 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1406:Pask
|
UTSW |
1 |
93,249,373 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1831:Pask
|
UTSW |
1 |
93,248,491 (GRCm39) |
splice site |
probably null |
|
|
R1958:Pask
|
UTSW |
1 |
93,249,180 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2143:Pask
|
UTSW |
1 |
93,249,019 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2144:Pask
|
UTSW |
1 |
93,249,019 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2145:Pask
|
UTSW |
1 |
93,249,019 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2509:Pask
|
UTSW |
1 |
93,258,485 (GRCm39) |
missense |
possibly damaging |
0.62 |
|
R2858:Pask
|
UTSW |
1 |
93,249,373 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2899:Pask
|
UTSW |
1 |
93,262,269 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3545:Pask
|
UTSW |
1 |
93,244,837 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3778:Pask
|
UTSW |
1 |
93,255,189 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4111:Pask
|
UTSW |
1 |
93,238,540 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4514:Pask
|
UTSW |
1 |
93,249,855 (GRCm39) |
missense |
probably benign |
0.03 |
|
R4527:Pask
|
UTSW |
1 |
93,248,224 (GRCm39) |
missense |
probably benign |
|
|
R4580:Pask
|
UTSW |
1 |
93,249,830 (GRCm39) |
missense |
probably benign |
0.36 |
|
R4718:Pask
|
UTSW |
1 |
93,249,918 (GRCm39) |
missense |
possibly damaging |
0.67 |
|
R4775:Pask
|
UTSW |
1 |
93,265,246 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R5036:Pask
|
UTSW |
1 |
93,249,801 (GRCm39) |
nonsense |
probably null |
|
|
R5070:Pask
|
UTSW |
1 |
93,258,596 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5084:Pask
|
UTSW |
1 |
93,249,819 (GRCm39) |
missense |
probably benign |
|
|
R5151:Pask
|
UTSW |
1 |
93,262,350 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5196:Pask
|
UTSW |
1 |
93,237,805 (GRCm39) |
unclassified |
probably benign |
|
|
R5643:Pask
|
UTSW |
1 |
93,265,065 (GRCm39) |
critical splice donor site |
probably null |
|
|
R5739:Pask
|
UTSW |
1 |
93,249,778 (GRCm39) |
missense |
probably benign |
|
|
R6126:Pask
|
UTSW |
1 |
93,242,081 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7161:Pask
|
UTSW |
1 |
93,238,627 (GRCm39) |
missense |
probably benign |
|
|
R7284:Pask
|
UTSW |
1 |
93,248,391 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7289:Pask
|
UTSW |
1 |
93,259,309 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8277:Pask
|
UTSW |
1 |
93,253,085 (GRCm39) |
critical splice donor site |
probably null |
|
|
R8303:Pask
|
UTSW |
1 |
93,248,286 (GRCm39) |
missense |
probably benign |
0.10 |
|
R8309:Pask
|
UTSW |
1 |
93,240,573 (GRCm39) |
nonsense |
probably null |
|
|
R8321:Pask
|
UTSW |
1 |
93,248,377 (GRCm39) |
missense |
possibly damaging |
0.85 |
|
R8476:Pask
|
UTSW |
1 |
93,249,361 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8814:Pask
|
UTSW |
1 |
93,248,307 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9061:Pask
|
UTSW |
1 |
93,253,191 (GRCm39) |
nonsense |
probably null |
|
|
R9198:Pask
|
UTSW |
1 |
93,265,205 (GRCm39) |
missense |
possibly damaging |
0.72 |
|
R9406:Pask
|
UTSW |
1 |
93,251,987 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1088:Pask
|
UTSW |
1 |
93,244,523 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1177:Pask
|
UTSW |
1 |
93,263,454 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- CACTTGCATAACTAAGCCAATATGC -3'
(R):5'- AGGACAGGTGGAGCTCTTAC -3'
Sequencing Primer
(F):5'- GGACAAGTTCTTATCTCTTTGCAATC -3'
(R):5'- ACAGGTGGAGCTCTTACTGTCTTTC -3'
|
| Posted On |
2022-08-09 |
Incidental Mutation