Mutagenetix > Incidental Mutation

Incidental Mutation 'R9187:Cfap44'

726322

Institutional Source

Beutler Lab

Gene Symbol

Cfap44

Ensembl Gene

ENSMUSG00000071550

Gene Name

cilia and flagella associated protein 44

Synonyms

Wdr52, 6330444M21Rik, D16Ertd642e

MMRRC Submission

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R9187 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

44215159-44302791 bp(+) (GRCm39)

Type of Mutation

intron

DNA Base Change (assembly)

T to C at 44225144 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000113908 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000099742] [ENSMUST00000120049] [ENSMUST00000147988]

AlphaFold

E9Q5M6

Predicted Effect

probably benign
Transcript: ENSMUST00000099742

SMART Domains

Protein: ENSMUSP00000097331
Gene: ENSMUSG00000071550

Domain	Start	End	E-Value	Type
low complexity region	42	64	N/A	INTRINSIC
low complexity region	76	92	N/A	INTRINSIC
Blast:WD40	161	201	1e-7	BLAST
WD40	204	246	4.58e1	SMART
WD40	249	288	4.62e-1	SMART
Blast:WD40	292	337	2e-15	BLAST
WD40	342	381	4.8e-2	SMART
WD40	447	486	4.95e-4	SMART
WD40	491	532	2.64e2	SMART
WD40	552	591	2.98e-7	SMART
Blast:WD40	595	634	1e-19	BLAST
coiled coil region	669	711	N/A	INTRINSIC
WD40	780	820	3.82e1	SMART
WD40	830	872	2.4e-2	SMART
coiled coil region	907	955	N/A	INTRINSIC
coiled coil region	1101	1122	N/A	INTRINSIC
low complexity region	1266	1295	N/A	INTRINSIC
low complexity region	1312	1325	N/A	INTRINSIC
coiled coil region	1402	1459	N/A	INTRINSIC
low complexity region	1476	1488	N/A	INTRINSIC
low complexity region	1489	1523	N/A	INTRINSIC
coiled coil region	1543	1607	N/A	INTRINSIC
coiled coil region	1630	1731	N/A	INTRINSIC
coiled coil region	1795	1822	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000120049

SMART Domains

Protein: ENSMUSP00000113908
Gene: ENSMUSG00000071550

Domain	Start	End	E-Value	Type
low complexity region	42	64	N/A	INTRINSIC
low complexity region	76	92	N/A	INTRINSIC
Blast:WD40	161	201	1e-7	BLAST
WD40	204	246	4.58e1	SMART
WD40	249	288	4.62e-1	SMART
Blast:WD40	292	337	2e-15	BLAST
WD40	342	381	4.8e-2	SMART
WD40	447	486	4.95e-4	SMART
WD40	491	532	2.64e2	SMART
WD40	552	591	2.98e-7	SMART
Blast:WD40	595	634	1e-19	BLAST
coiled coil region	669	711	N/A	INTRINSIC
WD40	780	820	3.82e1	SMART
WD40	830	872	2.4e-2	SMART
coiled coil region	907	955	N/A	INTRINSIC
coiled coil region	1101	1122	N/A	INTRINSIC
low complexity region	1266	1295	N/A	INTRINSIC
low complexity region	1312	1325	N/A	INTRINSIC
coiled coil region	1402	1459	N/A	INTRINSIC
low complexity region	1476	1488	N/A	INTRINSIC
low complexity region	1489	1523	N/A	INTRINSIC
coiled coil region	1543	1607	N/A	INTRINSIC
coiled coil region	1630	1731	N/A	INTRINSIC
coiled coil region	1795	1822	N/A	INTRINSIC

Predicted Effect

unknown
Transcript: ENSMUST00000147988
AA Change: Y130H

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.5%

Validation Efficiency

97% (70/72)

MGI Phenotype

PHENOTYPE: Mice homozygous for a knock-out allele exhibit complete male sterility, asthenozoospermia, and teratozoospermia characterized by multiple sperm axonemal defects. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 75 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca5	A	G	11: 110,200,961 (GRCm39)		probably null	Het
Abcb1a	T	A	5: 8,765,016 (GRCm39)	C669S	probably benign	Het
Abcc3	A	G	11: 94,255,913 (GRCm39)	L524P	probably damaging	Het
Akap5	A	T	12: 76,376,745 (GRCm39)	K726*	probably null	Het
Aldh16a1	T	C	7: 44,791,441 (GRCm39)	E778G	probably damaging	Het
Ankle2	G	A	5: 110,400,610 (GRCm39)	V649M	possibly damaging	Het
Apon	A	G	10: 128,090,832 (GRCm39)	N170S	probably benign	Het
Baiap2l1	T	C	5: 144,217,764 (GRCm39)	Y274C	probably benign	Het
Bub1	A	T	2: 127,656,856 (GRCm39)	N425K	possibly damaging	Het
Camsap1	A	G	2: 25,820,028 (GRCm39)	C1487R	probably damaging	Het
Cd4	A	C	6: 124,844,651 (GRCm39)	V378G	probably damaging	Het
Cenpa	C	A	5: 30,824,380 (GRCm39)	P3Q	unknown	Het
Cfap65	T	A	1: 74,956,517 (GRCm39)	M1021L	probably benign	Het
Ddx39a	G	T	8: 84,449,113 (GRCm39)	M300I	probably benign	Het
Dgkh	T	C	14: 78,832,601 (GRCm39)	R819G	probably damaging	Het
Dlc1	A	T	8: 37,405,786 (GRCm39)	M1K	probably null	Het
Dnah9	A	G	11: 65,895,972 (GRCm39)	W2468R	probably benign	Het
Ebag9	A	T	15: 44,503,706 (GRCm39)	K177I	probably damaging	Het
Ehbp1	T	C	11: 22,101,184 (GRCm39)	I249V	probably damaging	Het
Fam171b	T	C	2: 83,710,365 (GRCm39)	V679A	probably damaging	Het
Gabbr2	G	A	4: 46,674,533 (GRCm39)	T818I	probably damaging	Het
Gcn1	T	C	5: 115,752,177 (GRCm39)	S2098P	probably damaging	Het
Glb1	T	C	9: 114,302,991 (GRCm39)	I609T	probably damaging	Het
Gm5916	T	G	9: 36,032,020 (GRCm39)	H88P	probably benign	Het
Gon4l	T	C	3: 88,786,618 (GRCm39)	S586P	probably benign	Het
Gzmg	T	A	14: 56,394,714 (GRCm39)	T185S	probably benign	Het
Hipk3	T	A	2: 104,276,936 (GRCm39)	D381V	probably damaging	Het
Hnrnpul2	C	A	19: 8,808,319 (GRCm39)	N681K	probably benign	Het
Hpdl	C	A	4: 116,678,372 (GRCm39)	G30C	probably damaging	Het
Iws1	G	A	18: 32,213,213 (GRCm39)	E214K	possibly damaging	Het
Krt82	C	A	15: 101,450,260 (GRCm39)	V479L	probably benign	Het
Lama4	G	A	10: 38,924,124 (GRCm39)		probably null	Het
Lamc1	C	A	1: 153,097,434 (GRCm39)	E1537*	probably null	Het
Mab21l3	G	A	3: 101,730,594 (GRCm39)	T215M	probably benign	Het
Magi3	C	A	3: 103,923,073 (GRCm39)	V1215F	possibly damaging	Het
Mical2	T	A	7: 111,902,797 (GRCm39)	C89*	probably null	Het
Mitf	T	A	6: 97,994,835 (GRCm39)	V427D	probably benign	Het
Muc4	T	C	16: 32,589,102 (GRCm39)	V753A		Het
Myo16	G	A	8: 10,492,233 (GRCm39)	R725H	unknown	Het
Ncapg2	T	A	12: 116,402,287 (GRCm39)	D706E	probably damaging	Het
Ndst1	T	C	18: 60,824,268 (GRCm39)	D803G	probably benign	Het
Neb	A	T	2: 52,096,115 (GRCm39)	V5065D	probably damaging	Het
Npm3	G	A	19: 45,737,941 (GRCm39)	R19*	probably null	Het
Ntrk3	A	C	7: 77,896,966 (GRCm39)	N690K	possibly damaging	Het
Or7g32	T	C	9: 19,389,166 (GRCm39)	I127V	probably benign	Het
Or7g35	T	C	9: 19,495,950 (GRCm39)	I39T	probably benign	Het
Or8d4	C	A	9: 40,038,886 (GRCm39)	V124L	possibly damaging	Het
P3h2	G	A	16: 25,924,186 (GRCm39)	A83V	probably benign	Het
Pdia2	A	G	17: 26,415,910 (GRCm39)	S362P	probably damaging	Het
Pmp22	C	T	11: 63,025,268 (GRCm39)	H34Y	probably benign	Het
Pmp22	T	C	11: 63,025,317 (GRCm39)	V50A	probably benign	Het
Ppfia4	T	C	1: 134,255,006 (GRCm39)	D283G	probably damaging	Het
Pramel58	T	C	5: 94,831,755 (GRCm39)	V254A	probably benign	Het
Prss55	T	A	14: 64,314,531 (GRCm39)	Q213L	probably null	Het
Rgsl1	C	T	1: 153,669,613 (GRCm39)	E258K	possibly damaging	Het
Ripor2	T	C	13: 24,897,632 (GRCm39)	F777L	probably benign	Het
Rsf1	GGC	GGCGGCGGCCGC	7: 97,229,140 (GRCm39)		probably benign	Het
Sgce	G	A	6: 4,711,362 (GRCm39)	R173C	probably benign	Het
Sncaip	T	G	18: 53,040,011 (GRCm39)	M735R	probably benign	Het
Snrpd2	T	A	7: 18,886,505 (GRCm39)	I96N	probably damaging	Het
Spryd3	T	G	15: 102,039,110 (GRCm39)	D121A	probably damaging	Het
Srsf3-ps	A	G	11: 98,516,187 (GRCm39)	V62A	possibly damaging	Het
Sspo	T	C	6: 48,472,223 (GRCm39)	C149R	probably damaging	Het
Tbc1d10b	A	T	7: 126,807,105 (GRCm39)	M144K	probably benign	Het
Tbc1d31	T	A	15: 57,779,485 (GRCm39)	I66N	probably damaging	Het
Tssk1	A	G	16: 17,712,457 (GRCm39)	T81A	possibly damaging	Het
Ttc28	A	G	5: 111,249,902 (GRCm39)	Y284C	probably damaging	Het
Ttn	T	C	2: 76,573,755 (GRCm39)	T25713A	probably benign	Het
Vmn2r125	T	C	4: 156,703,554 (GRCm39)	W311R	probably damaging	Het
Vmn2r80	A	T	10: 79,030,438 (GRCm39)	T755S	probably benign	Het
Vmn2r98	T	C	17: 19,301,481 (GRCm39)	C828R	probably damaging	Het
Wwox	T	C	8: 115,438,978 (GRCm39)	F348S	probably damaging	Het
Zeb2	T	A	2: 45,000,040 (GRCm39)	R65W	possibly damaging	Het
Zfp712	T	A	13: 67,188,637 (GRCm39)	H630L	probably damaging	Het
Zfp764	G	T	7: 127,004,608 (GRCm39)	H174Q	probably damaging	Het

Other mutations in Cfap44

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00236:Cfap44	APN	16	44,227,767 (GRCm39)	missense	probably damaging	0.99
IGL00952:Cfap44	APN	16	44,241,638 (GRCm39)	missense	probably benign	0.33
IGL01340:Cfap44	APN	16	44,224,493 (GRCm39)	missense	probably damaging	1.00
IGL01530:Cfap44	APN	16	44,269,530 (GRCm39)	missense	probably damaging	1.00
IGL02083:Cfap44	APN	16	44,257,525 (GRCm39)	missense	probably damaging	1.00
IGL02088:Cfap44	APN	16	44,271,991 (GRCm39)	missense	possibly damaging	0.59
IGL02142:Cfap44	APN	16	44,241,507 (GRCm39)	missense	probably benign	0.15
IGL02311:Cfap44	APN	16	44,225,134 (GRCm39)	splice site	probably benign
IGL02574:Cfap44	APN	16	44,301,746 (GRCm39)	missense	probably damaging	1.00
IGL02893:Cfap44	APN	16	44,237,180 (GRCm39)	missense	probably damaging	1.00
IGL02959:Cfap44	APN	16	44,291,230 (GRCm39)	splice site	probably benign
IGL03291:Cfap44	APN	16	44,227,674 (GRCm39)	missense	possibly damaging	0.86
feldgrau	UTSW	16	44,254,029 (GRCm39)	nonsense	probably null
I2288:Cfap44	UTSW	16	44,269,501 (GRCm39)	nonsense	probably null
R0023:Cfap44	UTSW	16	44,241,583 (GRCm39)	missense	probably benign	0.01
R0023:Cfap44	UTSW	16	44,241,583 (GRCm39)	missense	probably benign	0.01
R0036:Cfap44	UTSW	16	44,259,432 (GRCm39)	missense	possibly damaging	0.83
R0139:Cfap44	UTSW	16	44,253,785 (GRCm39)	missense	possibly damaging	0.90
R0145:Cfap44	UTSW	16	44,288,735 (GRCm39)	missense	probably damaging	1.00
R0193:Cfap44	UTSW	16	44,269,573 (GRCm39)	splice site	probably null
R0238:Cfap44	UTSW	16	44,242,681 (GRCm39)	missense	probably benign
R0238:Cfap44	UTSW	16	44,242,681 (GRCm39)	missense	probably benign
R0288:Cfap44	UTSW	16	44,236,257 (GRCm39)	splice site	probably benign
R0367:Cfap44	UTSW	16	44,253,839 (GRCm39)	critical splice donor site	probably null
R0452:Cfap44	UTSW	16	44,252,308 (GRCm39)	missense	probably benign	0.01
R0531:Cfap44	UTSW	16	44,221,789 (GRCm39)	start codon destroyed	probably benign	0.01
R0722:Cfap44	UTSW	16	44,225,039 (GRCm39)	missense	possibly damaging	0.94
R0801:Cfap44	UTSW	16	44,242,849 (GRCm39)	missense	probably benign	0.41
R1209:Cfap44	UTSW	16	44,242,780 (GRCm39)	missense	possibly damaging	0.86
R1215:Cfap44	UTSW	16	44,239,666 (GRCm39)	missense	probably damaging	1.00
R1385:Cfap44	UTSW	16	44,291,138 (GRCm39)	missense	probably damaging	1.00
R1400:Cfap44	UTSW	16	44,241,575 (GRCm39)	missense	probably benign	0.01
R1415:Cfap44	UTSW	16	44,301,752 (GRCm39)	missense	probably damaging	0.99
R1475:Cfap44	UTSW	16	44,254,175 (GRCm39)	splice site	probably benign
R1901:Cfap44	UTSW	16	44,242,737 (GRCm39)	missense	probably benign	0.00
R1902:Cfap44	UTSW	16	44,242,737 (GRCm39)	missense	probably benign	0.00
R1903:Cfap44	UTSW	16	44,242,737 (GRCm39)	missense	probably benign	0.00
R2023:Cfap44	UTSW	16	44,236,375 (GRCm39)	missense	probably benign	0.01
R2126:Cfap44	UTSW	16	44,230,838 (GRCm39)	missense	probably benign	0.40
R2147:Cfap44	UTSW	16	44,272,047 (GRCm39)	missense	probably benign	0.31
R2233:Cfap44	UTSW	16	44,271,888 (GRCm39)	missense	probably benign	0.01
R2439:Cfap44	UTSW	16	44,301,609 (GRCm39)	unclassified	probably benign
R3015:Cfap44	UTSW	16	44,230,832 (GRCm39)	missense	probably benign	0.40
R4178:Cfap44	UTSW	16	44,272,216 (GRCm39)	missense	possibly damaging	0.81
R4421:Cfap44	UTSW	16	44,242,800 (GRCm39)	missense	probably damaging	1.00
R4516:Cfap44	UTSW	16	44,294,227 (GRCm39)	nonsense	probably null
R4742:Cfap44	UTSW	16	44,269,615 (GRCm39)	splice site	probably null
R4766:Cfap44	UTSW	16	44,236,246 (GRCm39)	splice site	probably null
R4810:Cfap44	UTSW	16	44,271,898 (GRCm39)	missense	probably damaging	0.99
R4955:Cfap44	UTSW	16	44,295,640 (GRCm39)	missense	possibly damaging	0.75
R5058:Cfap44	UTSW	16	44,240,567 (GRCm39)	splice site	probably null
R5164:Cfap44	UTSW	16	44,301,752 (GRCm39)	missense	probably damaging	0.99
R5172:Cfap44	UTSW	16	44,269,556 (GRCm39)	missense	probably benign
R5344:Cfap44	UTSW	16	44,236,763 (GRCm39)	critical splice donor site	probably null
R5519:Cfap44	UTSW	16	44,224,451 (GRCm39)	missense	probably damaging	1.00
R5572:Cfap44	UTSW	16	44,301,668 (GRCm39)	missense	possibly damaging	0.95
R5601:Cfap44	UTSW	16	44,280,549 (GRCm39)	missense	probably damaging	1.00
R5625:Cfap44	UTSW	16	44,280,710 (GRCm39)	splice site	probably null
R5638:Cfap44	UTSW	16	44,275,894 (GRCm39)	missense	possibly damaging	0.94
R5727:Cfap44	UTSW	16	44,255,805 (GRCm39)	missense	probably damaging	0.98
R5950:Cfap44	UTSW	16	44,300,210 (GRCm39)	missense	probably damaging	0.99
R6057:Cfap44	UTSW	16	44,269,460 (GRCm39)	missense	probably benign	0.03
R6063:Cfap44	UTSW	16	44,250,255 (GRCm39)	missense	probably benign	0.00
R6221:Cfap44	UTSW	16	44,257,549 (GRCm39)	missense	probably benign	0.13
R6277:Cfap44	UTSW	16	44,257,669 (GRCm39)	missense	probably benign	0.04
R6322:Cfap44	UTSW	16	44,254,029 (GRCm39)	nonsense	probably null
R6836:Cfap44	UTSW	16	44,224,442 (GRCm39)	missense	probably damaging	0.99
R6854:Cfap44	UTSW	16	44,269,391 (GRCm39)	critical splice acceptor site	probably null
R6889:Cfap44	UTSW	16	44,224,495 (GRCm39)	missense	probably benign	0.03
R7233:Cfap44	UTSW	16	44,242,771 (GRCm39)	missense	probably damaging	0.99
R7294:Cfap44	UTSW	16	44,225,256 (GRCm39)	intron	probably benign
R7298:Cfap44	UTSW	16	44,301,775 (GRCm39)	missense	probably benign	0.04
R7332:Cfap44	UTSW	16	44,250,191 (GRCm39)	missense	probably damaging	1.00
R7410:Cfap44	UTSW	16	44,288,776 (GRCm39)	missense	probably damaging	1.00
R7455:Cfap44	UTSW	16	44,225,147 (GRCm39)	intron	probably benign
R7456:Cfap44	UTSW	16	44,252,305 (GRCm39)	missense	probably benign	0.07
R7491:Cfap44	UTSW	16	44,291,111 (GRCm39)	missense	probably damaging	1.00
R7587:Cfap44	UTSW	16	44,224,469 (GRCm39)	missense	probably benign	0.02
R7698:Cfap44	UTSW	16	44,254,149 (GRCm39)	missense	probably damaging	0.99
R7717:Cfap44	UTSW	16	44,250,298 (GRCm39)	missense	probably damaging	0.97
R7953:Cfap44	UTSW	16	44,234,054 (GRCm39)	missense	probably benign	0.00
R7994:Cfap44	UTSW	16	44,252,501 (GRCm39)	missense	probably damaging	0.97
R8043:Cfap44	UTSW	16	44,234,054 (GRCm39)	missense	probably benign	0.00
R8238:Cfap44	UTSW	16	44,235,668 (GRCm39)	splice site	probably null
R8338:Cfap44	UTSW	16	44,239,698 (GRCm39)	critical splice donor site	probably null
R8678:Cfap44	UTSW	16	44,295,636 (GRCm39)	missense	probably damaging	1.00
R8680:Cfap44	UTSW	16	44,225,085 (GRCm39)	missense	probably damaging	0.98
R8785:Cfap44	UTSW	16	44,275,895 (GRCm39)	missense	probably damaging	0.99
R8922:Cfap44	UTSW	16	44,272,030 (GRCm39)	missense	probably benign	0.23
R9005:Cfap44	UTSW	16	44,280,517 (GRCm39)	missense	probably damaging	1.00
R9020:Cfap44	UTSW	16	44,257,522 (GRCm39)	missense	probably damaging	0.99
R9110:Cfap44	UTSW	16	44,255,923 (GRCm39)	missense	probably damaging	0.98
R9111:Cfap44	UTSW	16	44,252,326 (GRCm39)	missense	probably benign	0.00
R9126:Cfap44	UTSW	16	44,295,619 (GRCm39)	missense	possibly damaging	0.77
R9194:Cfap44	UTSW	16	44,288,824 (GRCm39)	missense	probably damaging	1.00
R9251:Cfap44	UTSW	16	44,229,276 (GRCm39)	missense	probably damaging	0.99
R9334:Cfap44	UTSW	16	44,239,654 (GRCm39)	missense	probably damaging	0.98
R9336:Cfap44	UTSW	16	44,242,807 (GRCm39)	missense	probably damaging	0.97
V1662:Cfap44	UTSW	16	44,269,501 (GRCm39)	nonsense	probably null
X0060:Cfap44	UTSW	16	44,269,437 (GRCm39)	missense	possibly damaging	0.83
Z1088:Cfap44	UTSW	16	44,221,829 (GRCm39)	missense	probably damaging	0.98
Z1177:Cfap44	UTSW	16	44,252,407 (GRCm39)	missense	probably benign	0.04

Predicted Primers

PCR Primer
(F):5'- GTTTTAGCTTCCCAGGAACCTC -3'
(R):5'- TTAGGTCAGCGGTTCTCAGC -3'

Sequencing Primer
(F):5'- CCTCCTGTTGAAGTTAAGGAAGAACC -3'
(R):5'- ATTTGCTCCAGGGGCTAT -3'

Posted On

2022-10-03