Incidental Mutation 'IGL01286:Blnk'
ID 72726
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Blnk
Ensembl Gene ENSMUSG00000061132
Gene Name B cell linker
Synonyms BASH, Bca, SLP-65, BCA, BLNK, Ly-57, Ly57
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.142) question?
Stock # IGL01286
Quality Score
Status
Chromosome 19
Chromosomal Location 40928927-40994535 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) T to C at 40934506 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Lysine to Arginine at position 389 (K389R)
Ref Sequence ENSEMBL: ENSMUSP00000112473 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000054769] [ENSMUST00000117695]
AlphaFold Q9QUN3
Predicted Effect probably benign
Transcript: ENSMUST00000054769
AA Change: K392R

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
SMART Domains Protein: ENSMUSP00000057844
Gene: ENSMUSG00000061132
AA Change: K392R

DomainStartEndE-ValueType
Blast:SH2 139 180 6e-8 BLAST
low complexity region 235 247 N/A INTRINSIC
low complexity region 251 266 N/A INTRINSIC
SH2 345 436 3.07e-19 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000117695
AA Change: K389R

PolyPhen 2 Score 0.005 (Sensitivity: 0.97; Specificity: 0.74)
SMART Domains Protein: ENSMUSP00000112473
Gene: ENSMUSG00000061132
AA Change: K389R

DomainStartEndE-ValueType
Blast:SH2 139 180 6e-8 BLAST
low complexity region 235 247 N/A INTRINSIC
low complexity region 251 266 N/A INTRINSIC
SH2 342 433 3.07e-19 SMART
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a cytoplasmic linker or adaptor protein that plays a critical role in B cell development. This protein bridges B cell receptor-associated kinase activation with downstream signaling pathways, thereby affecting various biological functions. The phosphorylation of five tyrosine residues is necessary for this protein to nucleate distinct signaling effectors following B cell receptor activation. Mutations in this gene cause hypoglobulinemia and absent B cells, a disease in which the pro- to pre-B-cell transition is developmentally blocked. Deficiency in this protein has also been shown in some cases of pre-B acute lymphoblastic leukemia. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, May 2012]
PHENOTYPE: Homozygotes for targeted null mutations exhibit a partial block in pre-B cell development, a lack of B1 B cells, reduced numbers of mature B cells, lower IgM and IgG3 serum levels, poor IgM immune responses, and a high incidence of pre-B cell lymphoma. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 30 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4921524L21Rik T A 18: 6,629,578 C214S possibly damaging Het
5430419D17Rik A T 7: 131,246,703 N862I probably damaging Het
Ankrd26 A T 6: 118,559,107 V122E probably damaging Het
Cdh11 T A 8: 102,664,629 Q325L probably damaging Het
Cep112 T C 11: 108,859,409 probably null Het
Cmtr2 T A 8: 110,222,852 I598N possibly damaging Het
Col1a2 A C 6: 4,533,891 E857D unknown Het
Col2a1 G A 15: 97,994,878 P237L unknown Het
Commd2 G A 3: 57,650,722 T66M probably benign Het
Cyp2c50 A T 19: 40,092,284 K241N probably benign Het
Fbxo2 A G 4: 148,165,706 N231S probably benign Het
Grm5 T C 7: 87,602,565 S8P probably benign Het
Ip6k1 A G 9: 108,045,883 T405A probably benign Het
Kel G T 6: 41,688,117 probably null Het
Lin54 T C 5: 100,485,607 T73A probably benign Het
Nek1 T A 8: 61,124,216 V1052D possibly damaging Het
Olfr1184 T A 2: 88,487,248 I172K probably damaging Het
Olfr782 T A 10: 129,350,650 L29H probably damaging Het
Pcid2 T C 8: 13,090,660 D155G probably damaging Het
Ptchd1 T C X: 155,574,824 T462A possibly damaging Het
Pxdn A G 12: 29,982,754 E179G probably benign Het
Rfc2 T C 5: 134,589,389 L82P probably damaging Het
Sh3rf2 T C 18: 42,139,611 probably null Het
Sis A T 3: 72,941,025 W639R probably damaging Het
Tbcd T C 11: 121,493,893 probably null Het
Tert G A 13: 73,628,297 R389H possibly damaging Het
Tns3 C T 11: 8,492,617 S582N probably benign Het
Tssk2 C T 16: 17,898,958 T75I probably benign Het
Txnl4a C T 18: 80,218,741 T64I probably benign Het
Xpot T C 10: 121,602,338 D782G probably benign Het
Other mutations in Blnk
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00780:Blnk APN 19 40934446 missense probably benign 0.15
IGL02090:Blnk APN 19 40934485 missense probably benign 0.38
IGL02814:Blnk APN 19 40962429 missense probably damaging 1.00
IGL02831:Blnk APN 19 40962429 missense probably damaging 1.00
IGL03024:Blnk APN 19 40994002 splice site probably benign
Augen UTSW 19 40929291 missense probably damaging 1.00
Blick UTSW 19 40934459 missense probably damaging 1.00
busy UTSW 19 40952391 nonsense probably null
There UTSW 19 40952390 missense possibly damaging 0.94
IGL02988:Blnk UTSW 19 40929216 missense probably damaging 1.00
R0140:Blnk UTSW 19 40940224 missense probably damaging 0.99
R0671:Blnk UTSW 19 40937667 nonsense probably null
R1617:Blnk UTSW 19 40962363 missense probably benign
R1638:Blnk UTSW 19 40937678 missense probably benign
R1803:Blnk UTSW 19 40952377 missense probably damaging 0.96
R1970:Blnk UTSW 19 40940165 splice site probably benign
R2880:Blnk UTSW 19 40962455 missense probably damaging 1.00
R2980:Blnk UTSW 19 40962350 missense probably damaging 1.00
R5421:Blnk UTSW 19 40968523 missense probably damaging 1.00
R5987:Blnk UTSW 19 40929289 missense possibly damaging 0.95
R6321:Blnk UTSW 19 40934459 missense probably damaging 1.00
R6703:Blnk UTSW 19 40962506 splice site probably null
R6970:Blnk UTSW 19 40962377 missense probably damaging 0.99
R7101:Blnk UTSW 19 40972638 missense probably benign 0.01
R7432:Blnk UTSW 19 40959857 nonsense probably null
R7560:Blnk UTSW 19 40952390 missense possibly damaging 0.94
R7797:Blnk UTSW 19 40959788 missense possibly damaging 0.51
R8287:Blnk UTSW 19 40929291 missense probably damaging 1.00
R8473:Blnk UTSW 19 40952410 missense possibly damaging 0.81
R8798:Blnk UTSW 19 40962351 missense probably damaging 1.00
R9094:Blnk UTSW 19 40994039 missense probably benign 0.39
R9139:Blnk UTSW 19 40934518 missense probably benign 0.00
Posted On 2013-10-07