Mutagenetix > Incidental Mutation

Incidental Mutation 'R9683:Bicral'

728714

Institutional Source

Beutler Lab

Gene Symbol

Bicral

Ensembl Gene

ENSMUSG00000036568

Gene Name

BRD4 interacting chromatin remodeling complex associated protein like

Synonyms

BC032203, Gltscr1l

MMRRC Submission

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R9683 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

47109046-47169408 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 47122944 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glycine at position 649 (D649G)

Ref Sequence

ENSEMBL: ENSMUSP00000044833 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000040624]

AlphaFold

Q8CHH5

Predicted Effect

possibly damaging
Transcript: ENSMUST00000040624
AA Change: D649G

PolyPhen 2 Score 0.888 (Sensitivity: 0.82; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000044833
Gene: ENSMUSG00000036568
AA Change: D649G

Domain	Start	End	E-Value	Type
low complexity region	2	15	N/A	INTRINSIC
low complexity region	41	55	N/A	INTRINSIC
low complexity region	204	218	N/A	INTRINSIC
low complexity region	406	417	N/A	INTRINSIC
low complexity region	605	616	N/A	INTRINSIC
Pfam:GLTSCR1	701	808	4.5e-40	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.1%

Validation Efficiency

MGI Phenotype

PHENOTYPE: Mice homozygous for a gene trapped allele display abnormal embryo turning, embryonic growth retardation, cardiac hypertrophy, and complete embryonic lethality during organogenesis. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 60 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700006A11Rik	C	T	3: 124,200,095 (GRCm39)	G499D	probably benign	Het
Acr	T	A	15: 89,457,440 (GRCm39)	Y229*	probably null	Het
Adam6b	G	T	12: 113,454,176 (GRCm39)	C331F	probably benign	Het
Ahnak	T	C	19: 8,984,719 (GRCm39)	V2001A	possibly damaging	Het
Ankrd11	C	T	8: 123,617,682 (GRCm39)	A2057T	probably benign	Het
Anln	A	T	9: 22,283,536 (GRCm39)	C432*	probably null	Het
Aox4	T	C	1: 58,278,462 (GRCm39)		probably null	Het
Astn1	A	G	1: 158,491,619 (GRCm39)	I1007V	possibly damaging	Het
C1qbp	G	A	11: 70,873,749 (GRCm39)	R10C	probably damaging	Het
Cass4	C	T	2: 172,268,656 (GRCm39)	P246L	probably damaging	Het
Celsr3	T	A	9: 108,704,522 (GRCm39)	V335E	probably damaging	Het
Cfap52	T	A	11: 67,822,639 (GRCm39)	T411S	probably benign	Het
Cnot6	A	T	11: 49,580,164 (GRCm39)	L43I	possibly damaging	Het
Col9a3	G	A	2: 180,248,322 (GRCm39)		probably null	Het
Dnah14	A	G	1: 181,426,509 (GRCm39)	R210G	probably benign	Het
Fat4	A	G	3: 38,943,332 (GRCm39)	S742G	possibly damaging	Het
Fbn2	C	T	18: 58,186,099 (GRCm39)	V1750M	probably benign	Het
Glrx2	A	G	1: 143,622,292 (GRCm39)	D96G	probably damaging	Het
Gm8369	T	C	19: 11,489,097 (GRCm39)	L128P	probably damaging	Het
Gpr155	A	G	2: 73,192,780 (GRCm39)	I585T	probably benign	Het
Heatr1	T	C	13: 12,449,140 (GRCm39)	S1907P	probably damaging	Het
Hscb	T	C	5: 110,983,881 (GRCm39)	T129A	possibly damaging	Het
Itgb5	T	A	16: 33,740,335 (GRCm39)	Y482N	probably damaging	Het
Kmt5b	T	A	19: 3,865,587 (GRCm39)	*884R	probably null	Het
L3mbtl1	A	T	2: 162,812,228 (GRCm39)	T758S	possibly damaging	Het
Mindy1	A	T	3: 95,202,176 (GRCm39)	H351L	probably benign	Het
Mmel1	A	T	4: 154,977,285 (GRCm39)	I552F	probably damaging	Het
Mos	T	C	4: 3,871,186 (GRCm39)	D210G	probably benign	Het
Npl	A	C	1: 153,421,030 (GRCm39)	I16S	possibly damaging	Het
Nutm2	C	A	13: 50,629,017 (GRCm39)	P694T	possibly damaging	Het
Or1e1c	G	A	11: 73,265,811 (GRCm39)	V82I	probably damaging	Het
Or52ae7	A	G	7: 103,119,157 (GRCm39)		probably benign	Het
Plekhg4	T	C	8: 106,102,923 (GRCm39)	F261L	probably benign	Het
Ppfia3	T	A	7: 45,005,999 (GRCm39)	N331I	probably benign	Het
Ppp1r12a	T	A	10: 108,096,747 (GRCm39)	S712R	possibly damaging	Het
Psg20	T	A	7: 18,416,508 (GRCm39)	K203*	probably null	Het
Recql	C	T	6: 142,305,646 (GRCm39)	R234Q		Het
Rerg	A	G	6: 137,033,252 (GRCm39)	F160S	probably damaging	Het
Rp1l1	A	G	14: 64,269,126 (GRCm39)	K1571E	probably damaging	Het
Rsrc1	T	A	3: 67,257,328 (GRCm39)	S247T	probably damaging	Het
Sacs	T	A	14: 61,450,881 (GRCm39)	I4309N	possibly damaging	Het
Setd7	A	T	3: 51,450,111 (GRCm39)	I105N	possibly damaging	Het
Sgk1	AAGA	AAGAGA	10: 21,868,290 (GRCm39)		probably null	Het
Siglec1	T	A	2: 130,921,236 (GRCm39)	H645L	probably damaging	Het
Slain1	A	T	14: 103,925,621 (GRCm39)	D323V	probably damaging	Het
Slc25a10	A	G	11: 120,386,312 (GRCm39)	N139D	probably damaging	Het
Slc9a9	T	G	9: 94,552,235 (GRCm39)	F41V	probably damaging	Het
Spag9	A	C	11: 93,988,568 (GRCm39)	E879D	probably damaging	Het
Tdrd7	T	A	4: 46,025,946 (GRCm39)	L922Q	probably damaging	Het
Tiprl	A	G	1: 165,050,147 (GRCm39)	F156S	probably damaging	Het
Tmem185b	G	C	1: 119,454,748 (GRCm39)	V170L	probably damaging	Het
Top2a	G	A	11: 98,887,683 (GRCm39)	T1275I	probably benign	Het
Tpp1	A	G	7: 105,398,104 (GRCm39)	L353P	probably damaging	Het
Twnk	T	A	19: 44,998,622 (GRCm39)	H513Q	probably damaging	Het
Ubr5	C	T	15: 37,978,271 (GRCm39)	V2467I		Het
Vmn2r16	T	A	5: 109,511,677 (GRCm39)	I628N	probably damaging	Het
Zan	T	C	5: 137,462,776 (GRCm39)	E801G	unknown	Het
Zfp810	T	C	9: 22,189,799 (GRCm39)	R370G	possibly damaging	Het
Zfp955a	A	G	17: 33,461,587 (GRCm39)	S182P	probably benign	Het
Znrf3	T	C	11: 5,394,465 (GRCm39)	T72A	possibly damaging	Het

Other mutations in Bicral

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00547:Bicral	APN	17	47,136,278 (GRCm39)	missense	probably benign	0.01
IGL01068:Bicral	APN	17	47,136,317 (GRCm39)	missense	probably damaging	1.00
IGL01899:Bicral	APN	17	47,135,600 (GRCm39)	missense	probably benign	0.08
IGL02321:Bicral	APN	17	47,122,873 (GRCm39)	missense	probably benign	0.01
IGL02425:Bicral	APN	17	47,119,380 (GRCm39)	missense	probably benign	0.05
R0091:Bicral	UTSW	17	47,136,233 (GRCm39)	missense	probably damaging	1.00
R0268:Bicral	UTSW	17	47,124,978 (GRCm39)	splice site	probably benign
R0344:Bicral	UTSW	17	47,124,978 (GRCm39)	splice site	probably benign
R0508:Bicral	UTSW	17	47,136,327 (GRCm39)	missense	possibly damaging	0.61
R0589:Bicral	UTSW	17	47,112,522 (GRCm39)	missense	probably benign	0.00
R1442:Bicral	UTSW	17	47,112,650 (GRCm39)	missense	probably benign	0.05
R1468:Bicral	UTSW	17	47,135,519 (GRCm39)	missense	probably benign	0.00
R1468:Bicral	UTSW	17	47,135,519 (GRCm39)	missense	probably benign	0.00
R1874:Bicral	UTSW	17	47,136,104 (GRCm39)	missense	probably benign	0.30
R2057:Bicral	UTSW	17	47,135,814 (GRCm39)	missense	possibly damaging	0.69
R2120:Bicral	UTSW	17	47,135,741 (GRCm39)	missense	probably benign	0.02
R2190:Bicral	UTSW	17	47,136,049 (GRCm39)	missense	probably damaging	0.98
R3737:Bicral	UTSW	17	47,136,836 (GRCm39)	missense	probably damaging	1.00
R3961:Bicral	UTSW	17	47,135,751 (GRCm39)	missense	probably damaging	0.96
R3977:Bicral	UTSW	17	47,141,917 (GRCm39)	start codon destroyed	unknown
R3979:Bicral	UTSW	17	47,141,917 (GRCm39)	start codon destroyed	unknown
R4183:Bicral	UTSW	17	47,124,955 (GRCm39)	missense	probably damaging	1.00
R4876:Bicral	UTSW	17	47,136,502 (GRCm39)	missense	probably damaging	1.00
R5104:Bicral	UTSW	17	47,112,182 (GRCm39)	missense	probably damaging	0.98
R5310:Bicral	UTSW	17	47,124,909 (GRCm39)	missense	possibly damaging	0.89
R5493:Bicral	UTSW	17	47,112,620 (GRCm39)	missense	possibly damaging	0.77
R5610:Bicral	UTSW	17	47,119,418 (GRCm39)	missense	probably damaging	0.99
R5656:Bicral	UTSW	17	47,119,295 (GRCm39)	missense	probably damaging	0.99
R5771:Bicral	UTSW	17	47,136,284 (GRCm39)	missense	possibly damaging	0.59
R5891:Bicral	UTSW	17	47,112,155 (GRCm39)	missense	probably benign
R6426:Bicral	UTSW	17	47,141,005 (GRCm39)	missense	probably benign	0.36
R6497:Bicral	UTSW	17	47,136,499 (GRCm39)	missense	probably damaging	1.00
R7025:Bicral	UTSW	17	47,112,594 (GRCm39)	missense	probably benign
R7037:Bicral	UTSW	17	47,135,560 (GRCm39)	missense	probably benign	0.08
R7440:Bicral	UTSW	17	47,136,710 (GRCm39)	missense	probably damaging	1.00
R7997:Bicral	UTSW	17	47,112,534 (GRCm39)	missense	probably benign	0.37
R8680:Bicral	UTSW	17	47,141,873 (GRCm39)	splice site	probably benign
R8802:Bicral	UTSW	17	47,135,626 (GRCm39)	missense	probably benign	0.28
R9366:Bicral	UTSW	17	47,117,558 (GRCm39)	missense	possibly damaging	0.94
V3553:Bicral	UTSW	17	47,141,021 (GRCm39)	missense	probably damaging	1.00
X0019:Bicral	UTSW	17	47,136,747 (GRCm39)	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- TGTTAGGTACCAACGACAAAGC -3'
(R):5'- TCCCAACCGGTGTTCTTCAAG -3'

Sequencing Primer
(F):5'- GACAAAGCCTTCTGAGACTGC -3'
(R):5'- CCAACCGGTGTTCTTCAAGAAATTC -3'

Posted On

2022-10-06