Mutagenetix > Incidental Mutation

Incidental Mutation 'R9689:Or4f6'

729022

Institutional Source

Beutler Lab

Gene Symbol

Or4f6

Ensembl Gene

ENSMUSG00000108827

Gene Name

olfactory receptor family 4 subfamily F member 6

Synonyms

Olfr1310, MOR245-3, GA_x6K02T2Q125-73056609-73055671

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.234) question?

Stock #

R9689 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

111838591-111839529 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 111839124 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Leucine at position 136 (M136L)

Ref Sequence

ENSEMBL: ENSMUSP00000149701 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000207169] [ENSMUST00000213559]

AlphaFold

Q8VF85

Predicted Effect

probably benign
Transcript: ENSMUST00000207169
AA Change: M136L

PolyPhen 2 Score 0.292 (Sensitivity: 0.91; Specificity: 0.89)

Predicted Effect

probably benign
Transcript: ENSMUST00000213559
AA Change: M136L

PolyPhen 2 Score 0.292 (Sensitivity: 0.91; Specificity: 0.89)

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.5%
20x: 98.6%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 65 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adgrl3	T	A	5: 81,942,780 (GRCm39)	V1538E	probably damaging	Het
Ank1	T	C	8: 23,631,253 (GRCm39)	V1833A	probably benign	Het
Apc2	G	A	10: 80,150,733 (GRCm39)	R1929Q	probably damaging	Het
Asb1	A	G	1: 91,474,708 (GRCm39)	I85V	probably damaging	Het
Bco2	A	T	9: 50,445,938 (GRCm39)	I486K	probably damaging	Het
Braf	T	A	6: 39,591,084 (GRCm39)	I792F	probably damaging	Het
Cacng2	T	C	15: 77,879,399 (GRCm39)	K308E	possibly damaging	Het
Ccr6	G	T	17: 8,475,821 (GRCm39)	R342L	possibly damaging	Het
Cdh16	T	A	8: 105,341,108 (GRCm39)	I802F	probably benign	Het
Cftr	T	C	6: 18,313,649 (GRCm39)	I1291T	probably damaging	Het
CN725425	T	A	15: 91,120,030 (GRCm39)	D50E	possibly damaging	Het
Cnga1	T	C	5: 72,762,170 (GRCm39)	Y448C	probably benign	Het
Cntnap1	T	C	11: 101,072,178 (GRCm39)	I477T	probably damaging	Het
Col18a1	G	A	10: 76,916,578 (GRCm39)	Q366*	probably null	Het
Csf3	C	A	11: 98,592,949 (GRCm39)	A104D	probably benign	Het
Dmbt1	A	G	7: 130,660,015 (GRCm39)	H422R	unknown	Het
Dnah12	A	G	14: 26,590,871 (GRCm39)	D3325G	probably null	Het
Dnah17	T	C	11: 117,963,731 (GRCm39)	D2514G	probably damaging	Het
Fgf9	T	A	14: 58,310,680 (GRCm39)	H56Q	probably damaging	Het
Fgfr3	A	T	5: 33,892,248 (GRCm39)	Y689F	probably damaging	Het
Fhip2a	G	A	19: 57,369,710 (GRCm39)	V418I	probably benign	Het
Gar1	A	T	3: 129,624,269 (GRCm39)	D74E	probably damaging	Het
Helq	T	C	5: 100,934,927 (GRCm39)	K488E	possibly damaging	Het
Hmg20a	A	G	9: 56,381,823 (GRCm39)	H33R	possibly damaging	Het
Igsf10	T	C	3: 59,233,624 (GRCm39)	D1703G	probably damaging	Het
Jph3	A	T	8: 122,480,377 (GRCm39)	I352F	probably benign	Het
Kng1	T	C	16: 22,879,224 (GRCm39)	F96S	probably damaging	Het
Krtap5-2	C	A	7: 141,729,029 (GRCm39)	S217I	unknown	Het
Lamp3	T	C	16: 19,518,455 (GRCm39)	S261G	possibly damaging	Het
Macf1	A	G	4: 123,365,654 (GRCm39)	F3036L	probably benign	Het
Map4k4	G	A	1: 40,058,722 (GRCm39)	R972H	possibly damaging	Het
Mccc1	C	T	3: 36,030,903 (GRCm39)	D388N	probably benign	Het
Mcoln1	T	A	8: 3,557,436 (GRCm39)	Y147*	probably null	Het
Mei1	T	C	15: 81,997,129 (GRCm39)	S622P		Het
Ms4a5	T	C	19: 11,254,058 (GRCm39)	I136M	possibly damaging	Het
Nav3	A	G	10: 109,605,034 (GRCm39)	L1013P	probably damaging	Het
Ndrg2	T	C	14: 52,146,071 (GRCm39)	N170S	probably damaging	Het
Ndufa12	G	A	10: 94,035,832 (GRCm39)	G40D	probably damaging	Het
Ogdhl	T	A	14: 32,059,523 (GRCm39)	V390E	probably damaging	Het
Or10ak12	A	C	4: 118,666,999 (GRCm39)	S21A	probably benign	Het
Or1e26	T	C	11: 73,479,686 (GRCm39)	R293G	probably damaging	Het
Or4d10	A	T	19: 12,051,567 (GRCm39)	I143K	possibly damaging	Het
Or8g37	A	T	9: 39,731,801 (GRCm39)	I289F	possibly damaging	Het
Osgin1	A	G	8: 120,172,247 (GRCm39)	D347G	possibly damaging	Het
Oxct2a	A	T	4: 123,216,687 (GRCm39)	N231K	probably damaging	Het
Pak6	C	T	2: 118,520,243 (GRCm39)	T78M	probably benign	Het
Pde4dip	T	C	3: 97,649,841 (GRCm39)	Y1006C	probably damaging	Het
Psg18	A	G	7: 18,084,880 (GRCm39)	I193T	probably benign	Het
Psmd2	C	A	16: 20,479,173 (GRCm39)	H677Q	probably benign	Het
Resf1	T	A	6: 149,229,766 (GRCm39)	C937*	probably null	Het
Scaf11	C	T	15: 96,316,195 (GRCm39)	R1123H	probably damaging	Het
Setx	A	T	2: 29,051,555 (GRCm39)	S2036C	probably damaging	Het
Skint6	A	G	4: 113,093,546 (GRCm39)	F199S	probably damaging	Het
Slc3a2	A	T	19: 8,686,594 (GRCm39)	S367R	probably damaging	Het
Spidr	T	C	16: 15,871,304 (GRCm39)	D222G	probably damaging	Het
Styxl1	T	C	5: 135,799,190 (GRCm39)	E8G	probably null	Het
Sycp2l	T	A	13: 41,295,256 (GRCm39)	F308I	probably damaging	Het
Syk	A	C	13: 52,778,808 (GRCm39)	K298T	probably benign	Het
Tcp11	T	A	17: 28,286,028 (GRCm39)	Q529L	possibly damaging	Het
Tgfbi	A	G	13: 56,762,100 (GRCm39)	Y61C	probably damaging	Het
Tlr9	G	A	9: 106,100,721 (GRCm39)	R4H	probably benign	Het
Top2a	A	C	11: 98,914,883 (GRCm39)	S4A	probably benign	Het
Ttc4	G	T	4: 106,528,919 (GRCm39)	H166N	probably benign	Het
Ube2o	C	A	11: 116,435,639 (GRCm39)	R383L	possibly damaging	Het
Umod	A	G	7: 119,076,517 (GRCm39)	V83A	possibly damaging	Het

Other mutations in Or4f6

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01947:Or4f6	APN	2	111,839,361 (GRCm39)	missense	possibly damaging	0.86
IGL02700:Or4f6	APN	2	111,839,036 (GRCm39)	missense	probably benign	0.04
IGL03008:Or4f6	APN	2	111,838,868 (GRCm39)	missense	possibly damaging	0.95
IGL03121:Or4f6	APN	2	111,838,953 (GRCm39)	missense	probably benign	0.02
R0025:Or4f6	UTSW	2	111,839,365 (GRCm39)	missense	probably damaging	0.98
R1624:Or4f6	UTSW	2	111,838,877 (GRCm39)	missense	probably damaging	1.00
R1851:Or4f6	UTSW	2	111,839,036 (GRCm39)	missense	probably benign	0.04
R3872:Or4f6	UTSW	2	111,838,668 (GRCm39)	missense	possibly damaging	0.95
R3873:Or4f6	UTSW	2	111,838,668 (GRCm39)	missense	possibly damaging	0.95
R3874:Or4f6	UTSW	2	111,838,668 (GRCm39)	missense	possibly damaging	0.95
R4651:Or4f6	UTSW	2	111,838,595 (GRCm39)	missense	probably damaging	1.00
R4652:Or4f6	UTSW	2	111,838,595 (GRCm39)	missense	probably damaging	1.00
R4834:Or4f6	UTSW	2	111,839,276 (GRCm39)	missense	probably damaging	1.00
R5076:Or4f6	UTSW	2	111,838,937 (GRCm39)	missense	probably damaging	0.99
R7262:Or4f6	UTSW	2	111,838,902 (GRCm39)	missense	probably damaging	1.00
R7339:Or4f6	UTSW	2	111,838,820 (GRCm39)	missense	probably damaging	1.00
R7657:Or4f6	UTSW	2	111,839,093 (GRCm39)	missense	probably benign	0.02
R7798:Or4f6	UTSW	2	111,838,617 (GRCm39)	missense	probably benign
R7875:Or4f6	UTSW	2	111,839,192 (GRCm39)	missense	probably benign	0.32
R8869:Or4f6	UTSW	2	111,838,596 (GRCm39)	missense	possibly damaging	0.88
X0027:Or4f6	UTSW	2	111,839,169 (GRCm39)	missense	probably damaging	1.00
Z1176:Or4f6	UTSW	2	111,838,802 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- ACCCCAGTGTGTATGTGTCC -3'
(R):5'- AGGCAATCTTTCCATCATTGAC -3'

Sequencing Primer
(F):5'- TGTCCACACAAGCAAGTTTAATAAAC -3'
(R):5'- TATTTTGTTCCTCCACAACACCAAAG -3'

Posted On

2022-10-06