Incidental Mutation 'IGL01294:Mre11a'
| ID |
73018 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Mre11a
|
| Ensembl Gene |
ENSMUSG00000031928 |
| Gene Name |
MRE11A homolog A, double strand break repair nuclease |
| Synonyms |
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
IGL01294
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
9 |
| Chromosomal Location |
14784654-14837123 bp(+) (GRCm38) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 14830915 bp (GRCm38)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Serine to Proline
at position 621
(S621P)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000111295
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000034405]
[ENSMUST00000115632]
|
| AlphaFold |
Q61216 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000034405
AA Change: S648P
PolyPhen 2
Score 0.890 (Sensitivity: 0.82; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000034405
Gene: ENSMUSG00000031928
AA Change: S648P
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Metallophos
|
13 |
249 |
6.3e-15 |
PFAM |
|
Mre11_DNA_bind
|
294 |
462 |
1.72e-70 |
SMART |
|
coiled coil region
|
487 |
519 |
N/A |
INTRINSIC |
|
low complexity region
|
566 |
594 |
N/A |
INTRINSIC |
|
low complexity region
|
683 |
699 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000115632
AA Change: S621P
PolyPhen 2
Score 0.968 (Sensitivity: 0.77; Specificity: 0.95)
|
| SMART Domains |
Protein: ENSMUSP00000111295
Gene: ENSMUSG00000031928
AA Change: S621P
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Metallophos
|
13 |
249 |
1.1e-31 |
PFAM |
|
Mre11_DNA_bind
|
294 |
435 |
7.6e-49 |
SMART |
|
coiled coil region
|
460 |
492 |
N/A |
INTRINSIC |
|
low complexity region
|
539 |
567 |
N/A |
INTRINSIC |
|
low complexity region
|
656 |
672 |
N/A |
INTRINSIC |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a nuclear protein involved in homologous recombination, telomere length maintenance, and DNA double-strand break repair. By itself, the protein has 3' to 5' exonuclease activity and endonuclease activity. The protein forms a complex with the RAD50 homolog; this complex is required for nonhomologous joining of DNA ends and possesses increased single-stranded DNA endonuclease and 3' to 5' exonuclease activities. In conjunction with a DNA ligase, this protein promotes the joining of noncomplementary ends in vitro using short homologies near the ends of the DNA fragments. This gene has a pseudogene on chromosome 3. Alternative splicing of this gene results in two transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]
PHENOTYPE: Though mutation of this locus affected chromosome stability, mutant mice were no more susceptible to tumorigenesis than wild-type mice. Mutant female mice showed reduced fertility. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 30 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 9130023H24Rik |
A |
T |
7: 128,237,119 (GRCm38) |
S101T |
probably benign |
Het |
| Apol11b |
G |
A |
15: 77,638,019 (GRCm38) |
T26M |
probably damaging |
Het |
| Arglu1 |
G |
T |
8: 8,683,739 (GRCm38) |
|
probably benign |
Het |
| Cacna2d2 |
T |
G |
9: 107,514,081 (GRCm38) |
Y436D |
probably damaging |
Het |
| Cd4 |
G |
A |
6: 124,879,378 (GRCm38) |
T50I |
probably benign |
Het |
| Cpne8 |
G |
A |
15: 90,501,445 (GRCm38) |
S460L |
probably damaging |
Het |
| Crat |
G |
A |
2: 30,405,187 (GRCm38) |
A436V |
probably damaging |
Het |
| Dmd |
T |
C |
X: 84,431,998 (GRCm38) |
|
probably null |
Het |
| Emilin2 |
G |
T |
17: 71,274,594 (GRCm38) |
A379E |
probably benign |
Het |
| Ercc2 |
A |
G |
7: 19,390,417 (GRCm38) |
I445V |
probably benign |
Het |
| Evc2 |
T |
C |
5: 37,347,510 (GRCm38) |
|
probably null |
Het |
| Filip1l |
A |
T |
16: 57,572,348 (GRCm38) |
K1100* |
probably null |
Het |
| Gm4353 |
T |
A |
7: 116,083,842 (GRCm38) |
D168V |
possibly damaging |
Het |
| Hsf4 |
G |
T |
8: 105,275,657 (GRCm38) |
*417L |
probably null |
Het |
| Kmt2a |
A |
G |
9: 44,820,297 (GRCm38) |
|
probably benign |
Het |
| Macroh2a1 |
A |
T |
13: 56,074,300 (GRCm38) |
V346E |
probably damaging |
Het |
| Mpzl1 |
A |
G |
1: 165,593,608 (GRCm38) |
S261P |
probably damaging |
Het |
| Muc6 |
T |
C |
7: 141,646,659 (GRCm38) |
Y934C |
probably damaging |
Het |
| Naip5 |
A |
G |
13: 100,217,080 (GRCm38) |
S1224P |
probably damaging |
Het |
| Nwd1 |
A |
T |
8: 72,711,745 (GRCm38) |
N1474Y |
probably damaging |
Het |
| Or2ag20 |
T |
C |
7: 106,865,763 (GRCm38) |
L261S |
probably damaging |
Het |
| Ptbp2 |
A |
G |
3: 119,747,812 (GRCm38) |
V192A |
probably damaging |
Het |
| Rfx2 |
T |
C |
17: 56,783,657 (GRCm38) |
Y421C |
probably damaging |
Het |
| Sfmbt2 |
T |
A |
2: 10,590,421 (GRCm38) |
|
probably benign |
Het |
| Slc4a10 |
A |
C |
2: 62,253,309 (GRCm38) |
|
probably null |
Het |
| Slitrk6 |
T |
C |
14: 110,750,074 (GRCm38) |
M734V |
probably benign |
Het |
| Tap1 |
T |
C |
17: 34,194,045 (GRCm38) |
|
probably null |
Het |
| Tep1 |
A |
G |
14: 50,829,657 (GRCm38) |
|
probably benign |
Het |
| Uba6 |
T |
A |
5: 86,150,048 (GRCm38) |
I256L |
possibly damaging |
Het |
| Wnt3 |
A |
T |
11: 103,808,314 (GRCm38) |
H82L |
possibly damaging |
Het |
|
| Other mutations in Mre11a |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00156:Mre11a
|
APN |
9 |
14,825,208 (GRCm38) |
missense |
probably benign |
0.28 |
|
IGL00429:Mre11a
|
APN |
9 |
14,802,813 (GRCm38) |
missense |
probably damaging |
1.00 |
|
IGL00922:Mre11a
|
APN |
9 |
14,799,588 (GRCm38) |
missense |
probably damaging |
1.00 |
|
IGL01095:Mre11a
|
APN |
9 |
14,809,824 (GRCm38) |
missense |
probably benign |
|
|
IGL01871:Mre11a
|
APN |
9 |
14,811,897 (GRCm38) |
missense |
possibly damaging |
0.95 |
|
IGL02194:Mre11a
|
APN |
9 |
14,815,209 (GRCm38) |
missense |
possibly damaging |
0.70 |
|
IGL02213:Mre11a
|
APN |
9 |
14,811,884 (GRCm38) |
missense |
probably damaging |
1.00 |
|
IGL02245:Mre11a
|
APN |
9 |
14,815,276 (GRCm38) |
unclassified |
probably benign |
|
|
IGL02749:Mre11a
|
APN |
9 |
14,826,591 (GRCm38) |
missense |
possibly damaging |
0.78 |
|
IGL02812:Mre11a
|
APN |
9 |
14,790,670 (GRCm38) |
splice site |
probably null |
|
|
bow
|
UTSW |
9 |
14,786,962 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R0050:Mre11a
|
UTSW |
9 |
14,830,973 (GRCm38) |
splice site |
probably benign |
|
|
R0594:Mre11a
|
UTSW |
9 |
14,815,209 (GRCm38) |
missense |
probably benign |
0.00 |
|
R1241:Mre11a
|
UTSW |
9 |
14,799,639 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R1905:Mre11a
|
UTSW |
9 |
14,799,627 (GRCm38) |
missense |
probably benign |
0.08 |
|
R2030:Mre11a
|
UTSW |
9 |
14,795,805 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R2270:Mre11a
|
UTSW |
9 |
14,815,174 (GRCm38) |
missense |
probably benign |
0.00 |
|
R2511:Mre11a
|
UTSW |
9 |
14,795,769 (GRCm38) |
critical splice acceptor site |
probably null |
|
|
R2851:Mre11a
|
UTSW |
9 |
14,826,547 (GRCm38) |
missense |
probably benign |
0.00 |
|
R2852:Mre11a
|
UTSW |
9 |
14,826,547 (GRCm38) |
missense |
probably benign |
0.00 |
|
R2853:Mre11a
|
UTSW |
9 |
14,826,547 (GRCm38) |
missense |
probably benign |
0.00 |
|
R3765:Mre11a
|
UTSW |
9 |
14,809,847 (GRCm38) |
missense |
probably benign |
0.25 |
|
R4612:Mre11a
|
UTSW |
9 |
14,802,903 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R5007:Mre11a
|
UTSW |
9 |
14,809,820 (GRCm38) |
missense |
probably benign |
0.10 |
|
R5343:Mre11a
|
UTSW |
9 |
14,811,834 (GRCm38) |
missense |
probably damaging |
0.98 |
|
R5679:Mre11a
|
UTSW |
9 |
14,786,919 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R5834:Mre11a
|
UTSW |
9 |
14,799,657 (GRCm38) |
missense |
probably benign |
0.15 |
|
R5914:Mre11a
|
UTSW |
9 |
14,811,936 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R5935:Mre11a
|
UTSW |
9 |
14,786,962 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R6089:Mre11a
|
UTSW |
9 |
14,819,464 (GRCm38) |
missense |
probably benign |
0.02 |
|
R6393:Mre11a
|
UTSW |
9 |
14,785,509 (GRCm38) |
start codon destroyed |
probably null |
0.00 |
|
R6625:Mre11a
|
UTSW |
9 |
14,805,391 (GRCm38) |
missense |
possibly damaging |
0.52 |
|
R7248:Mre11a
|
UTSW |
9 |
14,811,913 (GRCm38) |
missense |
possibly damaging |
0.52 |
|
R7744:Mre11a
|
UTSW |
9 |
14,809,832 (GRCm38) |
missense |
possibly damaging |
0.94 |
|
R7999:Mre11a
|
UTSW |
9 |
14,799,669 (GRCm38) |
nonsense |
probably null |
|
|
R8179:Mre11a
|
UTSW |
9 |
14,797,066 (GRCm38) |
missense |
probably null |
1.00 |
|
R9293:Mre11a
|
UTSW |
9 |
14,799,588 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R9302:Mre11a
|
UTSW |
9 |
14,785,530 (GRCm38) |
critical splice donor site |
probably null |
|
|
R9368:Mre11a
|
UTSW |
9 |
14,825,218 (GRCm38) |
missense |
probably benign |
|
|
R9410:Mre11a
|
UTSW |
9 |
14,805,420 (GRCm38) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2013-10-07 |
Incidental Mutation