Mutagenetix > Incidental Mutation

Incidental Mutation 'R9717:Fcho2'

730562

Institutional Source

Beutler Lab

Gene Symbol

Fcho2

Ensembl Gene

ENSMUSG00000041685

Gene Name

FCH domain only 2

Synonyms

MMRRC Submission

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R9717 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

98723403-98815449 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 98763694 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Serine to Threonine at position 304 (S304T)

Ref Sequence

ENSEMBL: ENSMUSP00000042959 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000040340] [ENSMUST00000099277] [ENSMUST00000109403] [ENSMUST00000179563] [ENSMUST00000224992] [ENSMUST00000225840]

AlphaFold

Q3UQN2

Predicted Effect

probably damaging
Transcript: ENSMUST00000040340
AA Change: S304T

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000042959
Gene: ENSMUSG00000041685
AA Change: S304T

Domain	Start	End	E-Value	Type
FCH	8	94	1.74e-19	SMART
low complexity region	341	351	N/A	INTRINSIC
low complexity region	433	456	N/A	INTRINSIC
low complexity region	485	501	N/A	INTRINSIC
low complexity region	503	520	N/A	INTRINSIC
Pfam:muHD	542	808	2.5e-71	PFAM

Predicted Effect

SMART Domains

Protein: ENSMUSP00000096883
Gene: ENSMUSG00000041685
AA Change: S304T

Domain	Start	End	E-Value	Type
FCH	8	94	1.74e-19	SMART
low complexity region	342	352	N/A	INTRINSIC
low complexity region	434	457	N/A	INTRINSIC
low complexity region	486	502	N/A	INTRINSIC
low complexity region	504	521	N/A	INTRINSIC
Pfam:muHD	543	803	4.7e-68	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000109403
AA Change: S304T

PolyPhen 2 Score 0.606 (Sensitivity: 0.87; Specificity: 0.91)

SMART Domains

Protein: ENSMUSP00000105030
Gene: ENSMUSG00000041685
AA Change: S304T

Domain	Start	End	E-Value	Type
FCH	8	94	1.74e-19	SMART
low complexity region	341	351	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000179563
AA Change: S304T

PolyPhen 2 Score 0.979 (Sensitivity: 0.75; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000137422
Gene: ENSMUSG00000041685
AA Change: S304T

Domain	Start	End	E-Value	Type
FCH	8	94	1.74e-19	SMART
low complexity region	341	351	N/A	INTRINSIC

Predicted Effect

possibly damaging
Transcript: ENSMUST00000224992
AA Change: S304T

PolyPhen 2 Score 0.606 (Sensitivity: 0.87; Specificity: 0.91)

Predicted Effect

probably benign
Transcript: ENSMUST00000225840

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.0%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 77 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adgrv1	T	A	13: 81,520,781	N2552I	probably damaging	Het
Amph	G	T	13: 19,125,083	A444S	probably benign	Het
Ankrd52	A	G	10: 128,380,588	N157S	probably benign	Het
Arhgap29	T	C	3: 122,004,271	F537L	probably benign	Het
Asic1	A	C	15: 99,692,776	T136P	probably damaging	Het
Atg2b	T	C	12: 105,639,302	Y1468C	probably benign	Het
Atm	A	G	9: 53,516,517	L431P	probably damaging	Het
Btaf1	A	G	19: 36,945,246	T17A	probably benign	Het
Car10	A	G	11: 93,304,541	N58S	probably benign	Het
Cd79b	A	T	11: 106,312,019	D252E	probably damaging	Het
Cdipt	C	T	7: 126,977,030		probably benign	Het
Cebpe	T	C	14: 54,711,708	D84G	probably damaging	Het
Cenpj	T	C	14: 56,552,996	E532G	probably benign	Het
Cherp	A	G	8: 72,463,076		probably null	Het
Chuk	T	C	19: 44,082,670	D532G	possibly damaging	Het
Clec1b	C	T	6: 129,397,640	T9I	probably benign	Het
Clspn	G	T	4: 126,564,963	A280S	possibly damaging	Het
Cts3	T	G	13: 61,564,985	Y307S	probably benign	Het
Cyp2c39	T	C	19: 39,568,049	M443T	possibly damaging	Het
Dhx57	C	T	17: 80,275,018	R386H	probably damaging	Het
Dhx58	A	T	11: 100,701,307	M305K	probably benign	Het
Dlgap3	T	C	4: 127,235,494	L894P	probably damaging	Het
Dnah3	A	T	7: 119,975,076	N2164K	probably damaging	Het
Dnajb14	A	G	3: 137,902,283	N183S	probably benign	Het
Drd5	G	T	5: 38,320,747	R361L	probably damaging	Het
Duoxa1	T	C	2: 122,305,141	E159G	probably damaging	Het
Exoc1	T	A	5: 76,563,232	S659R	probably benign	Het
Fam214b	T	C	4: 43,036,050	H227R	probably damaging	Het
Fbln7	T	C	2: 128,877,394	I37T	probably benign	Het
Fcgrt	T	G	7: 45,095,429	E205A	possibly damaging	Het
Gbp9	C	A	5: 105,105,721	G43*	probably null	Het
Gm21671	T	C	5: 25,949,831	E257G	probably damaging	Het
Gucy2d	A	G	7: 98,474,661	K151R	probably benign	Het
Heatr4	T	A	12: 83,978,055	I331F	probably damaging	Het
Hmcn1	G	A	1: 150,609,627	T4408I	probably damaging	Het
Hoxc9	C	T	15: 102,982,119	T156M	probably benign	Het
Hrnr	A	T	3: 93,320,680	E35V	probably damaging	Het
Idua	C	T	5: 108,670,171	Q70*	probably null	Het
Klf5	A	T	14: 99,301,753	I201F	probably damaging	Het
Lonrf1	T	C	8: 36,234,010	K349E	probably damaging	Het
Lrp1b	A	T	2: 41,268,383	D1721E		Het
Mdh1	T	A	11: 21,571,870		probably benign	Het
Mllt11	T	C	3: 95,220,210	H83R	probably benign	Het
Mrgprb4	A	C	7: 48,198,835	I115S	possibly damaging	Het
Mrpl38	A	G	11: 116,132,470	F319S	probably damaging	Het
Naif1	A	T	2: 32,454,895	M204L	probably benign	Het
Ncan	T	A	8: 70,101,978	D1063V	probably damaging	Het
Noto	A	T	6: 85,424,345	R119W	possibly damaging	Het
Olfr1220	G	A	2: 89,097,229	L233F	probably benign	Het
Olfr147	A	T	9: 38,403,545	I224F	probably damaging	Het
Olfr573-ps1	A	T	7: 102,941,958	D206E	probably damaging	Het
Olfr816	T	A	10: 129,912,179	Y33F	probably damaging	Het
Ovch2	A	G	7: 107,794,377	W181R	probably damaging	Het
Palm	G	C	10: 79,819,283	G292R	probably damaging	Het
Pdgfrb	T	A	18: 61,072,715	L591*	probably null	Het
Pik3c2g	T	C	6: 139,896,184	S772P		Het
Prx	C	A	7: 27,517,986	D776E	probably benign	Het
Ptpra	A	G	2: 130,542,446	E562G	possibly damaging	Het
Rbm4b	A	G	19: 4,757,331	Y25C	probably damaging	Het
Reln	T	C	5: 21,931,429	T2534A	probably benign	Het
Rnf123	T	C	9: 108,077,764	S14G	probably benign	Het
Rock2	A	G	12: 16,965,601	H833R	probably benign	Het
Rxfp3	A	G	15: 11,037,025	V87A	possibly damaging	Het
S100b	G	A	10: 76,257,102	G23D	probably damaging	Het
Scn9a	T	A	2: 66,526,658	M1100L	probably benign	Het
Sept11	T	A	5: 93,148,407	S55T	possibly damaging	Het
Sv2b	T	A	7: 75,119,928	Q622L	probably benign	Het
Taar7a	T	C	10: 23,992,901	D194G	probably benign	Het
Trappc3	T	C	4: 126,275,221	I168T	probably benign	Het
Trim27	T	C	13: 21,190,126		probably null	Het
Wdr49	G	A	3: 75,397,052	T109I	probably benign	Het
Wdr64	T	C	1: 175,717,288	Y96H	probably damaging	Het
Zfp219	A	T	14: 52,009,592	L26Q	probably damaging	Het
Zfp758	T	A	17: 22,374,848	V105D	possibly damaging	Het
Zfp975	C	G	7: 42,662,908	E94Q	possibly damaging	Het
Zfyve9	C	T	4: 108,682,137	A289T	probably benign	Het
Zscan5b	T	C	7: 6,231,526	S184P	possibly damaging	Het

Other mutations in Fcho2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01449:Fcho2	APN	13	98789807	missense	probably benign
IGL02058:Fcho2	APN	13	98730906	missense	probably damaging	0.98
IGL02516:Fcho2	APN	13	98730212	missense	probably benign	0.08
IGL02715:Fcho2	APN	13	98796335	missense	probably damaging	1.00
IGL03243:Fcho2	APN	13	98777384	splice site	probably benign
R0044:Fcho2	UTSW	13	98755544	intron	probably benign
R0087:Fcho2	UTSW	13	98735086	missense	probably benign	0.00
R0472:Fcho2	UTSW	13	98748267	missense	probably benign	0.01
R0501:Fcho2	UTSW	13	98764515	missense	possibly damaging	0.92
R1022:Fcho2	UTSW	13	98732659	missense	probably damaging	1.00
R1024:Fcho2	UTSW	13	98732659	missense	probably damaging	1.00
R1130:Fcho2	UTSW	13	98748289	missense	probably damaging	1.00
R1495:Fcho2	UTSW	13	98749850	critical splice donor site	probably null
R1593:Fcho2	UTSW	13	98784807	missense	possibly damaging	0.92
R1608:Fcho2	UTSW	13	98726198	missense	probably benign	0.01
R1638:Fcho2	UTSW	13	98745895	missense	possibly damaging	0.83
R1643:Fcho2	UTSW	13	98784816	missense	probably benign	0.00
R2125:Fcho2	UTSW	13	98775898	missense	possibly damaging	0.83
R3117:Fcho2	UTSW	13	98777438	missense	probably damaging	1.00
R3968:Fcho2	UTSW	13	98735056	missense	probably benign	0.06
R3970:Fcho2	UTSW	13	98735056	missense	probably benign	0.06
R4079:Fcho2	UTSW	13	98755612	missense	probably damaging	0.99
R4816:Fcho2	UTSW	13	98806366	missense	probably damaging	1.00
R5338:Fcho2	UTSW	13	98730891	missense	probably damaging	1.00
R5437:Fcho2	UTSW	13	98777474	missense	possibly damaging	0.95
R5457:Fcho2	UTSW	13	98789767	missense	probably damaging	0.99
R5733:Fcho2	UTSW	13	98789802	missense	probably damaging	0.99
R6136:Fcho2	UTSW	13	98789767	missense	probably damaging	0.99
R6186:Fcho2	UTSW	13	98815083	missense	probably benign	0.01
R6365:Fcho2	UTSW	13	98789859	missense	probably benign	0.20
R7041:Fcho2	UTSW	13	98784826	missense	possibly damaging	0.72
R7168:Fcho2	UTSW	13	98789463	missense	probably benign
R7218:Fcho2	UTSW	13	98753613	splice site	probably null
R7243:Fcho2	UTSW	13	98755216	missense	possibly damaging	0.94
R7533:Fcho2	UTSW	13	98784799	missense	probably benign	0.00
R7757:Fcho2	UTSW	13	98764503	critical splice donor site	probably null
R7904:Fcho2	UTSW	13	98796363	missense	possibly damaging	0.54
R7993:Fcho2	UTSW	13	98752016	splice site	probably null
R8004:Fcho2	UTSW	13	98789505	missense	possibly damaging	0.80
R8358:Fcho2	UTSW	13	98725774	nonsense	probably null
R8512:Fcho2	UTSW	13	98755222	missense	possibly damaging	0.69
R8692:Fcho2	UTSW	13	98745874	frame shift	probably null
R8792:Fcho2	UTSW	13	98815261	unclassified	probably benign
R8954:Fcho2	UTSW	13	98777477	missense	probably benign	0.05
R8969:Fcho2	UTSW	13	98755096	nonsense	probably null
R9091:Fcho2	UTSW	13	98789361	critical splice donor site	probably null
R9092:Fcho2	UTSW	13	98749883	missense	probably benign	0.01
R9171:Fcho2	UTSW	13	98755099	missense	probably benign
R9270:Fcho2	UTSW	13	98789361	critical splice donor site	probably null
R9668:Fcho2	UTSW	13	98777457	missense	probably benign	0.12
R9672:Fcho2	UTSW	13	98732670	nonsense	probably null
X0018:Fcho2	UTSW	13	98732082	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TGGGATGTCCATGAACAACC -3'
(R):5'- TCATCCAGAGTGTGCTTGAC -3'

Sequencing Primer
(F):5'- TGGGATGTCCATGAACAACCTATAG -3'
(R):5'- GTGCTTGACACTTACGAAAGATTTG -3'

Posted On

2022-10-06