Incidental Mutation 'R9727:Senp7'
ID 731123
Institutional Source Beutler Lab
Gene Symbol Senp7
Ensembl Gene ENSMUSG00000052917
Gene Name SUMO1/sentrin specific peptidase 7
Synonyms 2900036C23Rik, 6030449K19Rik, 2410152H17Rik, 2810413I22Rik
MMRRC Submission
Accession Numbers
Essential gene? Probably non essential (E-score: 0.246) question?
Stock # R9727 (G1)
Quality Score 225.009
Status Not validated
Chromosome 16
Chromosomal Location 55869306-56010394 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 55990169 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Histidine to Leucine at position 639 (H639L)
Ref Sequence ENSEMBL: ENSMUSP00000086779 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000089360] [ENSMUST00000089362]
AlphaFold Q8BUH8
Predicted Effect probably benign
Transcript: ENSMUST00000089360
AA Change: H612L

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000086776
Gene: ENSMUSG00000052917
AA Change: H612L

DomainStartEndE-ValueType
low complexity region 165 181 N/A INTRINSIC
low complexity region 352 376 N/A INTRINSIC
low complexity region 386 395 N/A INTRINSIC
low complexity region 639 646 N/A INTRINSIC
Pfam:Peptidase_C48 734 999 7.8e-36 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000089362
AA Change: H639L

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000086779
Gene: ENSMUSG00000052917
AA Change: H639L

DomainStartEndE-ValueType
low complexity region 192 208 N/A INTRINSIC
low complexity region 379 403 N/A INTRINSIC
low complexity region 413 422 N/A INTRINSIC
low complexity region 666 673 N/A INTRINSIC
Pfam:Peptidase_C48 761 1026 8.5e-36 PFAM
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 99.1%
Validation Efficiency
MGI Phenotype FUNCTION: This gene encodes a SUMO deconjugating enzyme of the Sentrin/SUMO-specific protease (SENP) family. The encoded protein is a protease that exhibits deSUMOylating activity towards proteins involved in chromatin remodeling and promotes chromatin relaxation for DNA repair or transcription. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Jan 2015]
Allele List at MGI
Other mutations in this stock
Total: 63 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Akirin2 A G 4: 34,565,248 (GRCm39) Y165C probably damaging Het
Aox4 A G 1: 58,286,473 (GRCm39) I702V probably benign Het
Arhgef33 A G 17: 80,678,720 (GRCm39) Y472C probably damaging Het
Atp13a4 T G 16: 29,228,589 (GRCm39) S964R Het
Atp1a2 T A 1: 172,118,936 (GRCm39) I69F probably benign Het
Bub1 T C 2: 127,652,609 (GRCm39) D586G possibly damaging Het
Ccdc177 C A 12: 80,806,044 (GRCm39) A77S probably benign Het
Ccdc187 A G 2: 26,171,204 (GRCm39) W425R probably damaging Het
Ccn2 A G 10: 24,471,820 (GRCm39) E37G probably benign Het
Ccsap T C 8: 124,572,169 (GRCm39) D111G possibly damaging Het
Cd300ld2 CGAACTGTGGATGGCAGAACTGTGGATGTCAGAACTGTGGATGGCAGAACTGTGGATGTCAGAACTGTGGATGGCAGAACTGTGGATGTCAGAACTGTGGATGTCAGAACTGTGGATGGCACAACTGTGCATGGCAGAACTGTGGATGGCACAACTGTGGATGGCAGAACTGTGG CGAACTGTGGATGGCAGAACTGTGGATGTCAGAACTGTGGATGGCAGAACTGTGGATGTCAGAACTGTGGATGTCAGAACTGTGGATGGCACAACTGTGCATGGCAGAACTGTGGATGGCACAACTGTGGATGGCAGAACTGTGG 11: 114,903,257 (GRCm39) probably benign Het
Ceacam3 C A 7: 16,892,262 (GRCm39) T335K Het
Col22a1 A T 15: 71,849,123 (GRCm39) W322R probably damaging Het
Col5a2 A G 1: 45,415,818 (GRCm39) V1443A possibly damaging Het
Dnah12 C T 14: 26,523,510 (GRCm39) Q2000* probably null Het
Dock7 G T 4: 98,875,568 (GRCm39) T1154K unknown Het
Dot1l T C 10: 80,628,382 (GRCm39) L1140P unknown Het
Dst G A 1: 34,314,877 (GRCm39) V4489M probably damaging Het
Duox2 G A 2: 122,116,998 (GRCm39) R960* probably null Het
Elavl2 T C 4: 91,169,495 (GRCm39) I97V probably benign Het
Emp1 G T 6: 135,358,016 (GRCm39) A121S probably benign Het
Exph5 A T 9: 53,287,702 (GRCm39) R1594S probably damaging Het
Fam186b C T 15: 99,171,669 (GRCm39) M859I probably benign Het
Fat2 A G 11: 55,159,137 (GRCm39) V3345A probably damaging Het
Gtf2f1 A T 17: 57,318,005 (GRCm39) N10K possibly damaging Het
Hid1 T G 11: 115,245,939 (GRCm39) K384N probably damaging Het
Hmcn1 T C 1: 150,674,566 (GRCm39) R579G probably benign Het
Igf1r T A 7: 67,857,554 (GRCm39) V1078D probably damaging Het
Il20rb A T 9: 100,357,001 (GRCm39) M43K probably damaging Het
Kdm3a A T 6: 71,569,094 (GRCm39) Y1134* probably null Het
Kif12 T A 4: 63,085,978 (GRCm39) N429I probably damaging Het
Kif18a C T 2: 109,118,464 (GRCm39) T93I probably damaging Het
Krtap9-5 T A 11: 99,839,340 (GRCm39) C14S possibly damaging Het
Lgals8 A T 13: 12,462,038 (GRCm39) M264K possibly damaging Het
Mlxipl T A 5: 135,150,388 (GRCm39) C143* probably null Het
Mtcl2 T A 2: 156,862,168 (GRCm39) Q1587L possibly damaging Het
Mvp A T 7: 126,595,040 (GRCm39) H268Q probably damaging Het
Ngef G A 1: 87,431,010 (GRCm39) P269L probably damaging Het
Nos2 A G 11: 78,843,825 (GRCm39) Y924C possibly damaging Het
Or4f52 A T 2: 111,061,961 (GRCm39) M59K probably damaging Het
Phf20l1 A G 15: 66,487,231 (GRCm39) N449S probably benign Het
Pot1b A C 17: 55,999,795 (GRCm39) I210S possibly damaging Het
Ptrh1 T A 2: 32,665,854 (GRCm39) W5R probably benign Het
Rasgrp3 A G 17: 75,810,239 (GRCm39) H313R probably damaging Het
Ric1 A T 19: 29,575,258 (GRCm39) I984F probably damaging Het
Rin2 G A 2: 145,702,506 (GRCm39) A401T possibly damaging Het
Rmdn3 C A 2: 118,968,827 (GRCm39) probably null Het
Sipa1l1 T C 12: 82,471,829 (GRCm39) S1270P probably damaging Het
Slc22a28 T A 19: 8,108,818 (GRCm39) E108V probably benign Het
Slc7a5 A G 8: 122,613,085 (GRCm39) I331T probably benign Het
Smarca4 T C 9: 21,611,160 (GRCm39) Y1467H probably damaging Het
Srebf2 T A 15: 82,076,506 (GRCm39) F759I possibly damaging Het
Thumpd2 A T 17: 81,345,585 (GRCm39) D304E probably damaging Het
Tmem59 A G 4: 107,050,547 (GRCm39) E226G probably benign Het
Trpv1 A C 11: 73,130,347 (GRCm39) D151A probably damaging Het
Txnrd3 A G 6: 89,651,751 (GRCm39) D607G probably benign Het
Ubr4 T A 4: 139,140,735 (GRCm39) V1218E probably damaging Het
Ugt2b5 T A 5: 87,288,165 (GRCm39) M1L probably damaging Het
Vwa5b2 C T 16: 20,423,477 (GRCm39) A1130V probably damaging Het
Wdr4 T C 17: 31,718,045 (GRCm39) E343G probably benign Het
Zbtb34 C A 2: 33,301,533 (GRCm39) R336L probably benign Het
Zfp607b T C 7: 27,403,125 (GRCm39) V527A probably benign Het
Zfp949 T A 9: 88,451,913 (GRCm39) C494* probably null Het
Other mutations in Senp7
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00895:Senp7 APN 16 55,902,740 (GRCm39) missense probably damaging 0.96
IGL01610:Senp7 APN 16 55,996,186 (GRCm39) missense possibly damaging 0.94
IGL01627:Senp7 APN 16 55,992,219 (GRCm39) missense probably damaging 1.00
IGL02748:Senp7 APN 16 56,006,457 (GRCm39) missense probably damaging 1.00
IGL03031:Senp7 APN 16 55,996,249 (GRCm39) missense probably damaging 1.00
IGL03083:Senp7 APN 16 55,992,228 (GRCm39) missense probably benign 0.28
R0034:Senp7 UTSW 16 55,973,933 (GRCm39) missense possibly damaging 0.63
R0200:Senp7 UTSW 16 55,944,236 (GRCm39) missense possibly damaging 0.66
R0242:Senp7 UTSW 16 55,999,884 (GRCm39) missense probably damaging 1.00
R0242:Senp7 UTSW 16 55,999,884 (GRCm39) missense probably damaging 1.00
R0547:Senp7 UTSW 16 55,996,189 (GRCm39) missense probably damaging 1.00
R0608:Senp7 UTSW 16 55,944,236 (GRCm39) missense possibly damaging 0.66
R1595:Senp7 UTSW 16 56,005,131 (GRCm39) missense probably damaging 1.00
R1737:Senp7 UTSW 16 55,944,162 (GRCm39) missense probably damaging 1.00
R1837:Senp7 UTSW 16 55,978,879 (GRCm39) missense probably benign 0.01
R1945:Senp7 UTSW 16 55,944,309 (GRCm39) missense probably damaging 0.98
R2143:Senp7 UTSW 16 55,990,169 (GRCm39) missense probably benign
R2275:Senp7 UTSW 16 56,005,146 (GRCm39) missense probably damaging 1.00
R2508:Senp7 UTSW 16 55,971,725 (GRCm39) missense probably benign 0.28
R3404:Senp7 UTSW 16 56,008,640 (GRCm39) missense probably damaging 1.00
R3405:Senp7 UTSW 16 56,008,640 (GRCm39) missense probably damaging 1.00
R3717:Senp7 UTSW 16 55,999,420 (GRCm39) splice site probably benign
R3885:Senp7 UTSW 16 56,006,442 (GRCm39) missense probably damaging 1.00
R4159:Senp7 UTSW 16 55,973,832 (GRCm39) missense possibly damaging 0.86
R4160:Senp7 UTSW 16 55,973,832 (GRCm39) missense possibly damaging 0.86
R4161:Senp7 UTSW 16 55,973,832 (GRCm39) missense possibly damaging 0.86
R4512:Senp7 UTSW 16 55,986,246 (GRCm39) missense probably damaging 1.00
R5291:Senp7 UTSW 16 56,006,542 (GRCm39) nonsense probably null
R5315:Senp7 UTSW 16 56,000,889 (GRCm39) missense probably benign 0.26
R5390:Senp7 UTSW 16 55,990,279 (GRCm39) missense probably benign
R5424:Senp7 UTSW 16 56,006,471 (GRCm39) missense possibly damaging 0.82
R5643:Senp7 UTSW 16 56,004,512 (GRCm39) splice site silent
R5644:Senp7 UTSW 16 56,004,512 (GRCm39) splice site silent
R5645:Senp7 UTSW 16 55,993,571 (GRCm39) missense possibly damaging 0.80
R5799:Senp7 UTSW 16 55,959,468 (GRCm39) splice site probably null
R5860:Senp7 UTSW 16 55,975,722 (GRCm39) missense possibly damaging 0.49
R5954:Senp7 UTSW 16 55,990,234 (GRCm39) missense probably benign 0.04
R6164:Senp7 UTSW 16 55,990,117 (GRCm39) missense probably damaging 1.00
R6280:Senp7 UTSW 16 55,982,738 (GRCm39) missense possibly damaging 0.62
R6647:Senp7 UTSW 16 55,993,618 (GRCm39) missense probably damaging 1.00
R6652:Senp7 UTSW 16 55,944,257 (GRCm39) missense probably benign 0.08
R7310:Senp7 UTSW 16 56,006,445 (GRCm39) missense probably benign 0.18
R7460:Senp7 UTSW 16 55,993,545 (GRCm39) missense possibly damaging 0.65
R7480:Senp7 UTSW 16 55,975,589 (GRCm39) missense possibly damaging 0.80
R7609:Senp7 UTSW 16 55,932,000 (GRCm39) missense probably benign 0.06
R7760:Senp7 UTSW 16 55,959,442 (GRCm39) missense probably benign
R8171:Senp7 UTSW 16 55,932,089 (GRCm39) missense probably damaging 1.00
R8290:Senp7 UTSW 16 55,974,000 (GRCm39) nonsense probably null
R8305:Senp7 UTSW 16 55,975,603 (GRCm39) missense probably damaging 1.00
R8353:Senp7 UTSW 16 56,008,691 (GRCm39) missense probably damaging 1.00
R8394:Senp7 UTSW 16 55,990,190 (GRCm39) missense possibly damaging 0.81
R8428:Senp7 UTSW 16 55,999,391 (GRCm39) missense probably damaging 1.00
R8453:Senp7 UTSW 16 56,008,691 (GRCm39) missense probably damaging 1.00
R8554:Senp7 UTSW 16 55,978,973 (GRCm39) missense probably benign 0.01
R8669:Senp7 UTSW 16 55,986,315 (GRCm39) missense probably damaging 0.97
R9153:Senp7 UTSW 16 56,006,486 (GRCm39) missense probably benign 0.34
R9521:Senp7 UTSW 16 55,992,144 (GRCm39) missense probably damaging 1.00
R9617:Senp7 UTSW 16 55,971,652 (GRCm39) missense probably benign 0.02
R9624:Senp7 UTSW 16 55,990,075 (GRCm39) missense probably damaging 1.00
R9631:Senp7 UTSW 16 55,975,631 (GRCm39) missense probably benign 0.45
R9657:Senp7 UTSW 16 55,944,295 (GRCm39) nonsense probably null
R9718:Senp7 UTSW 16 55,944,277 (GRCm39) missense probably damaging 0.98
U24488:Senp7 UTSW 16 56,005,182 (GRCm39) missense probably damaging 0.99
Predicted Primers PCR Primer
(F):5'- TTCCAGTGAGGTAGAATAGGAGCC -3'
(R):5'- CAGCAAAGCAGCTTTTACCTC -3'

Sequencing Primer
(F):5'- AGGAGCCTAAAAATTGTGATTTTGGG -3'
(R):5'- AGCAAAGCAGCTTTTACCTCTCTAC -3'
Posted On 2022-10-06