Mutagenetix > Incidental Mutation

Incidental Mutation 'R9743:Ifna16'

731916

Institutional Source

Beutler Lab

Gene Symbol

Ifna16

Ensembl Gene

ENSMUSG00000078355

Gene Name

interferon alpha 16

Synonyms

Gm13280, Ifna6t

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.049) question?

Stock #

R9743 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

88594524-88595093 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 88594930 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glycine at position 55 (D55G)

Ref Sequence

ENSEMBL: ENSMUSP00000100779 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000105148]

AlphaFold

Q810G1

Predicted Effect

probably damaging
Transcript: ENSMUST00000105148
AA Change: D55G

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000100779
Gene: ENSMUSG00000078355
AA Change: D55G

Domain	Start	End	E-Value	Type
signal peptide	1	23	N/A	INTRINSIC
IFabd	58	175	2.69e-66	SMART

Coding Region Coverage

1x: 99.9%
3x: 99.8%
10x: 99.4%
20x: 98.8%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 50 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abl1	A	G	2: 31,687,716 (GRCm39)	H571R	probably benign	Het
Adamts13	T	C	2: 26,886,812 (GRCm39)	V983A	probably benign	Het
Adamts13	G	A	2: 26,895,491 (GRCm39)		probably null	Het
AI661453	T	A	17: 47,780,240 (GRCm39)	N1181K	unknown	Het
Ank2	A	T	3: 126,733,794 (GRCm39)	N605K	possibly damaging	Het
Armc2	T	G	10: 41,798,598 (GRCm39)	K737T	probably benign	Het
Aspn	A	G	13: 49,705,150 (GRCm39)	Y4C	probably benign	Het
B3galt2	T	C	1: 143,522,847 (GRCm39)	F328L	probably benign	Het
Brd10	A	C	19: 29,694,261 (GRCm39)	I1744S	probably benign	Het
Ccl3	T	C	11: 83,539,428 (GRCm39)	E52G	probably damaging	Het
Col5a1	C	T	2: 27,864,505 (GRCm39)	A728V	unknown	Het
Cyp1b1	T	A	17: 80,017,808 (GRCm39)	D449V	probably benign	Het
D130043K22Rik	C	T	13: 25,056,299 (GRCm39)	P544S	probably damaging	Het
Dgkd	T	A	1: 87,861,850 (GRCm39)	W28R		Het
Emilin2	T	C	17: 71,580,867 (GRCm39)	T620A	probably benign	Het
Ercc6	T	G	14: 32,298,943 (GRCm39)	S1444A	probably benign	Het
Fam149b	A	G	14: 20,413,411 (GRCm39)	H264R	probably benign	Het
Fbxo7	T	C	10: 85,883,773 (GRCm39)	V458A	probably benign	Het
Gria4	T	G	9: 4,464,457 (GRCm39)	T502P	probably damaging	Het
Hfm1	T	C	5: 107,022,125 (GRCm39)	T974A	possibly damaging	Het
Lyst	T	C	13: 13,809,323 (GRCm39)	V331A	possibly damaging	Het
Mkks	T	C	2: 136,722,992 (GRCm39)	Y55C	probably benign	Het
Muc4	T	C	16: 32,601,194 (GRCm39)	F1291L		Het
Myo18a	A	G	11: 77,723,304 (GRCm39)	N1183S	probably benign	Het
Olfm2	T	C	9: 20,579,785 (GRCm39)	D322G	probably damaging	Het
Or2a25	G	A	6: 42,888,835 (GRCm39)	C126Y	probably damaging	Het
Or2a51	A	G	6: 43,179,229 (GRCm39)	Y217C	probably benign	Het
Or5aq7	A	G	2: 86,937,840 (GRCm39)	V297A	probably damaging	Het
Or7h8	A	G	9: 20,123,840 (GRCm39)	N65S	probably damaging	Het
Pdik1l	A	T	4: 134,011,815 (GRCm39)	D9E	probably benign	Het
Pdzrn3	C	A	6: 101,354,678 (GRCm39)	G58C	probably damaging	Het
Pex13	A	T	11: 23,606,119 (GRCm39)	L37*	probably null	Het
Pigr	G	A	1: 130,769,540 (GRCm39)	R117Q	possibly damaging	Het
Ptprq	T	A	10: 107,520,982 (GRCm39)	Y730F	probably damaging	Het
Rnase11	T	A	14: 51,287,370 (GRCm39)	K61N	probably benign	Het
Setdb2	T	C	14: 59,651,002 (GRCm39)	D427G	probably benign	Het
Slc22a21	A	G	11: 53,842,575 (GRCm39)	V518A	probably benign	Het
Slf2	T	C	19: 44,930,572 (GRCm39)	S550P	probably benign	Het
Supt16	T	C	14: 52,408,939 (GRCm39)	R812G	probably damaging	Het
Taf4	C	T	2: 179,581,592 (GRCm39)	V464M	possibly damaging	Het
Tas1r3	G	A	4: 155,945,256 (GRCm39)	T655I	probably damaging	Het
Tg	G	A	15: 66,561,839 (GRCm39)	V1108I	probably benign	Het
Tmc7	C	A	7: 118,150,452 (GRCm39)	R360S	probably damaging	Het
Tor3a	T	C	1: 156,501,103 (GRCm39)	T112A	probably benign	Het
Tsr3	T	C	17: 25,460,674 (GRCm39)	L180P	possibly damaging	Het
Unc5d	T	C	8: 29,209,801 (GRCm39)	T512A	possibly damaging	Het
Vmn2r103	T	A	17: 20,032,475 (GRCm39)	Y750N	probably damaging	Het
Vmn2r20	A	T	6: 123,373,369 (GRCm39)	V491D	probably damaging	Het
Vmn2r52	T	C	7: 9,904,606 (GRCm39)	E411G	possibly damaging	Het
Zfp760	T	A	17: 21,942,338 (GRCm39)	S504R	probably benign	Het

Other mutations in Ifna16

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01085:Ifna16	APN	4	88,594,969 (GRCm39)	missense	probably benign
IGL01779:Ifna16	APN	4	88,594,882 (GRCm39)	missense	probably damaging	1.00
IGL02717:Ifna16	APN	4	88,594,777 (GRCm39)	missense	possibly damaging	0.95
IGL03226:Ifna16	APN	4	88,594,741 (GRCm39)	missense	probably benign	0.18
R0040:Ifna16	UTSW	4	88,594,867 (GRCm39)	missense	probably benign	0.35
R0040:Ifna16	UTSW	4	88,594,867 (GRCm39)	missense	probably benign	0.35
R1514:Ifna16	UTSW	4	88,594,979 (GRCm39)	missense	possibly damaging	0.84
R2341:Ifna16	UTSW	4	88,594,565 (GRCm39)	missense	probably damaging	1.00
R4877:Ifna16	UTSW	4	88,594,681 (GRCm39)	missense	probably benign	0.00
R8989:Ifna16	UTSW	4	88,594,912 (GRCm39)	missense	probably damaging	1.00
R9619:Ifna16	UTSW	4	88,594,762 (GRCm39)	missense	probably benign	0.30
R9648:Ifna16	UTSW	4	88,595,060 (GRCm39)	missense	probably benign	0.18
R9688:Ifna16	UTSW	4	88,594,874 (GRCm39)	nonsense	probably null
Z1088:Ifna16	UTSW	4	88,594,615 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- AACCTCACCTGCTGCACTAG -3'
(R):5'- TGGCAACATTCACCATGGCTAG -3'

Sequencing Primer
(F):5'- ACTAGACAGGCTTGCAGGTCATTG -3'
(R):5'- AACATTCACCATGGCTAGGCTCTG -3'

Posted On

2022-11-14