Incidental Mutation 'R9768:Vmn1r168'
ID |
733369 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn1r168
|
Ensembl Gene |
ENSMUSG00000074291 |
Gene Name |
vomeronasal 1 receptor 168 |
Synonyms |
Gm10659 |
MMRRC Submission |
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.103)
|
Stock # |
R9768 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
7 |
Chromosomal Location |
23240145-23241074 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 23240509 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Phenylalanine to Serine
at position 122
(F122S)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000096301
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000098704]
|
AlphaFold |
K7N6B6 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000098704
AA Change: F122S
PolyPhen 2
Score 0.016 (Sensitivity: 0.95; Specificity: 0.79)
|
SMART Domains |
Protein: ENSMUSP00000096301 Gene: ENSMUSG00000074291 AA Change: F122S
Domain | Start | End | E-Value | Type |
Pfam:TAS2R
|
8 |
296 |
1.1e-12 |
PFAM |
Pfam:V1R
|
41 |
295 |
2.5e-14 |
PFAM |
|
Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.8%
- 10x: 99.3%
- 20x: 98.2%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 31 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4930524B15Rik |
C |
A |
11: 31,915,770 (GRCm39) |
F37L |
probably benign |
Het |
Akna |
T |
C |
4: 63,292,636 (GRCm39) |
E1091G |
probably benign |
Het |
Asxl3 |
A |
G |
18: 22,650,101 (GRCm39) |
T697A |
probably benign |
Het |
Cdk5r1 |
A |
G |
11: 80,368,414 (GRCm39) |
Y27C |
probably damaging |
Het |
Cdkl2 |
T |
A |
5: 92,165,244 (GRCm39) |
I511L |
probably benign |
Het |
Clp1 |
A |
C |
2: 84,556,477 (GRCm39) |
M1R |
probably null |
Het |
Csrnp1 |
A |
C |
9: 119,801,819 (GRCm39) |
D413E |
probably damaging |
Het |
Gbp2 |
T |
C |
3: 142,341,055 (GRCm39) |
S479P |
probably benign |
Het |
Il23r |
A |
G |
6: 67,408,603 (GRCm39) |
S413P |
probably damaging |
Het |
Klb |
G |
T |
5: 65,537,373 (GRCm39) |
R901L |
probably damaging |
Het |
Krt1 |
AAGCTGCCACCCCCAAAGCCACCACCGCCGTAGCTGCCACCCCCAAAGCCACCACCGCCGTAGCTGCCACCCCCAAAGCCACCAC |
AAGCTGCCACCCCCAAAGCCACCACCGCCGTAGCTGCCACCCCCAAAGCCACCAC |
15: 101,758,813 (GRCm39) |
|
probably benign |
Het |
Lta4h |
G |
A |
10: 93,308,818 (GRCm39) |
V373I |
probably benign |
Het |
Map3k1 |
G |
T |
13: 111,904,630 (GRCm39) |
Q385K |
probably benign |
Het |
Mapk8ip2 |
A |
T |
15: 89,343,160 (GRCm39) |
D634V |
probably damaging |
Het |
Myocd |
T |
C |
11: 65,078,217 (GRCm39) |
E526G |
probably damaging |
Het |
Nipal4 |
C |
T |
11: 46,041,473 (GRCm39) |
V241M |
probably damaging |
Het |
Nup188 |
T |
A |
2: 30,227,045 (GRCm39) |
V1206E |
probably damaging |
Het |
Pak6 |
A |
G |
2: 118,520,396 (GRCm39) |
Y129C |
probably damaging |
Het |
Pigp |
T |
A |
16: 94,166,332 (GRCm39) |
K125N |
probably damaging |
Het |
Pmm1 |
G |
A |
15: 81,840,460 (GRCm39) |
T95M |
possibly damaging |
Het |
Prrt3 |
A |
T |
6: 113,474,032 (GRCm39) |
N335K |
probably damaging |
Het |
Rsrc2 |
T |
C |
5: 123,868,561 (GRCm39) |
N361S |
probably benign |
Het |
Slc45a1 |
T |
C |
4: 150,722,982 (GRCm39) |
T301A |
probably benign |
Het |
Spata19 |
A |
C |
9: 27,311,744 (GRCm39) |
D121A |
probably damaging |
Het |
Speg |
T |
A |
1: 75,395,617 (GRCm39) |
L1796* |
probably null |
Het |
Stx2 |
A |
G |
5: 129,063,422 (GRCm39) |
S288P |
unknown |
Het |
Tlk1 |
C |
T |
2: 70,600,400 (GRCm39) |
S93N |
probably damaging |
Het |
Tmc8 |
A |
G |
11: 117,676,029 (GRCm39) |
D256G |
probably damaging |
Het |
Vldlr |
T |
C |
19: 27,218,720 (GRCm39) |
Y524H |
possibly damaging |
Het |
Vmn2r67 |
T |
C |
7: 84,802,037 (GRCm39) |
N88S |
probably benign |
Het |
Zhx1 |
A |
G |
15: 57,918,207 (GRCm39) |
V13A |
probably damaging |
Het |
|
Other mutations in Vmn1r168 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01761:Vmn1r168
|
APN |
7 |
23,241,070 (GRCm39) |
missense |
possibly damaging |
0.73 |
IGL02621:Vmn1r168
|
APN |
7 |
23,240,780 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02650:Vmn1r168
|
APN |
7 |
23,240,916 (GRCm39) |
missense |
probably benign |
0.13 |
PIT4466001:Vmn1r168
|
UTSW |
7 |
23,240,421 (GRCm39) |
missense |
probably damaging |
1.00 |
R0320:Vmn1r168
|
UTSW |
7 |
23,240,767 (GRCm39) |
missense |
probably benign |
0.12 |
R1595:Vmn1r168
|
UTSW |
7 |
23,240,620 (GRCm39) |
missense |
probably damaging |
1.00 |
R1618:Vmn1r168
|
UTSW |
7 |
23,240,725 (GRCm39) |
missense |
probably benign |
0.02 |
R1808:Vmn1r168
|
UTSW |
7 |
23,240,184 (GRCm39) |
missense |
probably benign |
0.05 |
R2418:Vmn1r168
|
UTSW |
7 |
23,240,824 (GRCm39) |
missense |
probably benign |
0.05 |
R2419:Vmn1r168
|
UTSW |
7 |
23,240,824 (GRCm39) |
missense |
probably benign |
0.05 |
R4846:Vmn1r168
|
UTSW |
7 |
23,240,490 (GRCm39) |
missense |
probably damaging |
1.00 |
R4864:Vmn1r168
|
UTSW |
7 |
23,240,907 (GRCm39) |
missense |
probably damaging |
0.98 |
R5269:Vmn1r168
|
UTSW |
7 |
23,240,839 (GRCm39) |
missense |
probably benign |
0.40 |
R6265:Vmn1r168
|
UTSW |
7 |
23,240,961 (GRCm39) |
missense |
probably benign |
|
R6353:Vmn1r168
|
UTSW |
7 |
23,240,944 (GRCm39) |
missense |
probably benign |
0.02 |
R6768:Vmn1r168
|
UTSW |
7 |
23,240,460 (GRCm39) |
missense |
probably damaging |
1.00 |
R6921:Vmn1r168
|
UTSW |
7 |
23,240,323 (GRCm39) |
missense |
probably damaging |
1.00 |
R8247:Vmn1r168
|
UTSW |
7 |
23,240,487 (GRCm39) |
missense |
possibly damaging |
0.61 |
R8749:Vmn1r168
|
UTSW |
7 |
23,240,428 (GRCm39) |
missense |
probably benign |
0.10 |
R9749:Vmn1r168
|
UTSW |
7 |
23,240,237 (GRCm39) |
missense |
probably damaging |
0.98 |
|
Predicted Primers |
PCR Primer
(F):5'- ACCCAAAGAAGTGATTTGTGC -3'
(R):5'- AATGCCGACACTGAAGCCAG -3'
Sequencing Primer
(F):5'- GCTAACATGGCTGTGTCCAG -3'
(R):5'- TGAAGCCAGATGTAAAACAGACC -3'
|
Posted On |
2022-11-14 |