Incidental Mutation 'R9772:Or4c105'
| ID |
733470 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or4c105
|
| Ensembl Gene |
ENSMUSG00000064084 |
| Gene Name |
olfactory receptor family 4 subfamily C member 105 |
| Synonyms |
Olfr1202, GA_x6K02T2Q125-50290367-50291296, MOR232-7 |
| MMRRC Submission |
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.052)
|
| Stock # |
R9772 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Not validated
|
| Chromosome |
2 |
| Chromosomal Location |
88643145-88648446 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to A
at 88647958 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Isoleucine
at position 148
(V148I)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150743
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000072057]
[ENSMUST00000214703]
[ENSMUST00000217059]
|
| AlphaFold |
Q8VF98 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000072057
AA Change: V148I
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
| SMART Domains |
Protein: ENSMUSP00000071935
Gene: ENSMUSG00000064084
AA Change: V148I
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
29 |
303 |
6.8e-47 |
PFAM |
|
Pfam:7tm_1
|
39 |
285 |
1.2e-16 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000214703
AA Change: V148I
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000217059
AA Change: V148I
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
| Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.8%
- 10x: 99.4%
- 20x: 98.5%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 39 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adamtsl2 |
A |
T |
2: 26,985,666 (GRCm39) |
I517F |
probably benign |
Het |
| Ankdd1a |
A |
G |
9: 65,408,749 (GRCm39) |
C506R |
probably damaging |
Het |
| Arid3c |
T |
C |
4: 41,724,723 (GRCm39) |
N371D |
probably damaging |
Het |
| Ccdc117 |
C |
T |
11: 5,492,042 (GRCm39) |
R6Q |
possibly damaging |
Het |
| Ccdc78 |
C |
T |
17: 26,005,665 (GRCm39) |
R26* |
probably null |
Het |
| Clca4a |
C |
A |
3: 144,676,422 (GRCm39) |
W86L |
probably damaging |
Het |
| Clrn2 |
C |
T |
5: 45,611,369 (GRCm39) |
Q73* |
probably null |
Het |
| Cpne6 |
A |
G |
14: 55,754,117 (GRCm39) |
D478G |
probably benign |
Het |
| Cyp2c40 |
T |
A |
19: 39,792,348 (GRCm39) |
I199L |
probably benign |
Het |
| Dna2 |
T |
C |
10: 62,786,522 (GRCm39) |
V90A |
probably benign |
Het |
| Dydc1 |
A |
G |
14: 40,804,248 (GRCm39) |
E90G |
probably damaging |
Het |
| Egf |
A |
T |
3: 129,499,756 (GRCm39) |
S795T |
probably benign |
Het |
| Gm13090 |
G |
T |
4: 151,175,565 (GRCm39) |
A102S |
unknown |
Het |
| Hectd4 |
A |
T |
5: 121,448,744 (GRCm39) |
Y364F |
probably benign |
Het |
| Iqgap3 |
C |
A |
3: 88,016,176 (GRCm39) |
F986L |
probably damaging |
Het |
| Krt79 |
T |
G |
15: 101,839,196 (GRCm39) |
E424D |
probably benign |
Het |
| Ltf |
T |
C |
9: 110,869,425 (GRCm39) |
S87P |
unknown |
Het |
| Mesp2 |
A |
G |
7: 79,461,348 (GRCm39) |
I224M |
possibly damaging |
Het |
| Mettl25 |
T |
C |
10: 105,633,127 (GRCm39) |
R439G |
probably benign |
Het |
| Mettl27 |
C |
T |
5: 134,962,390 (GRCm39) |
R63W |
possibly damaging |
Het |
| Nap1l1 |
C |
T |
10: 111,325,911 (GRCm39) |
R77* |
probably null |
Het |
| Niban2 |
T |
C |
2: 32,795,868 (GRCm39) |
I48T |
probably damaging |
Het |
| Notch4 |
G |
T |
17: 34,792,883 (GRCm39) |
|
probably null |
Het |
| Npepps |
A |
G |
11: 97,113,983 (GRCm39) |
I631T |
probably benign |
Het |
| Or8b51 |
A |
T |
9: 38,568,964 (GRCm39) |
C241* |
probably null |
Het |
| Pacsin3 |
T |
A |
2: 91,093,138 (GRCm39) |
L210Q |
probably damaging |
Het |
| Ppp2r1a |
A |
T |
17: 21,181,855 (GRCm39) |
I458F |
probably damaging |
Het |
| Ryr2 |
T |
C |
13: 11,609,785 (GRCm39) |
E4347G |
probably benign |
Het |
| Ryr3 |
A |
G |
2: 112,657,048 (GRCm39) |
I1911T |
probably damaging |
Het |
| Sec16a |
A |
G |
2: 26,329,417 (GRCm39) |
I866T |
possibly damaging |
Het |
| Sfr1 |
G |
T |
19: 47,722,019 (GRCm39) |
C145F |
probably benign |
Het |
| Slc35f4 |
A |
T |
14: 49,551,175 (GRCm39) |
Y230N |
probably damaging |
Het |
| Slx4 |
A |
G |
16: 3,818,849 (GRCm39) |
V89A |
|
Het |
| Son |
AGAACCCCCAGCCGCAGGAGCCGAACCCCCAGCCGCAGGAGCCGAACCCCCAGCCGCAGGAGCCGAACCCCCAGCCG |
AGAACCCCCAGCCGCAGGAGCCGAACCCCCAGCCGCAGGAGCCGAACCCCCAGCCG |
16: 91,457,222 (GRCm39) |
|
probably benign |
Het |
| Tbc1d23 |
A |
G |
16: 56,990,765 (GRCm39) |
I671T |
probably damaging |
Het |
| Trub1 |
G |
A |
19: 57,472,075 (GRCm39) |
V184I |
probably benign |
Het |
| Usp10 |
CAA |
CAAA |
8: 120,658,620 (GRCm39) |
|
probably null |
Het |
| Vit |
A |
C |
17: 78,932,398 (GRCm39) |
T502P |
probably damaging |
Het |
| Vmn2r15 |
C |
T |
5: 109,434,923 (GRCm39) |
G594R |
probably damaging |
Het |
|
| Other mutations in Or4c105 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL03221:Or4c105
|
APN |
2 |
88,647,781 (GRCm39) |
missense |
possibly damaging |
0.54 |
|
R0105:Or4c105
|
UTSW |
2 |
88,648,253 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0699:Or4c105
|
UTSW |
2 |
88,647,568 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0709:Or4c105
|
UTSW |
2 |
88,648,226 (GRCm39) |
missense |
probably benign |
0.42 |
|
R1177:Or4c105
|
UTSW |
2 |
88,647,704 (GRCm39) |
missense |
probably benign |
0.06 |
|
R1436:Or4c105
|
UTSW |
2 |
88,648,336 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
R1827:Or4c105
|
UTSW |
2 |
88,648,402 (GRCm39) |
missense |
probably benign |
0.04 |
|
R1828:Or4c105
|
UTSW |
2 |
88,648,402 (GRCm39) |
missense |
probably benign |
0.04 |
|
R1872:Or4c105
|
UTSW |
2 |
88,648,280 (GRCm39) |
missense |
probably benign |
0.02 |
|
R1878:Or4c105
|
UTSW |
2 |
88,647,805 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4903:Or4c105
|
UTSW |
2 |
88,648,342 (GRCm39) |
missense |
probably benign |
0.14 |
|
R5035:Or4c105
|
UTSW |
2 |
88,648,443 (GRCm39) |
missense |
probably benign |
0.01 |
|
R6279:Or4c105
|
UTSW |
2 |
88,647,719 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7402:Or4c105
|
UTSW |
2 |
88,647,687 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7809:Or4c105
|
UTSW |
2 |
88,647,902 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R8172:Or4c105
|
UTSW |
2 |
88,647,986 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8193:Or4c105
|
UTSW |
2 |
88,647,803 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8673:Or4c105
|
UTSW |
2 |
88,647,590 (GRCm39) |
missense |
probably benign |
|
|
R8730:Or4c105
|
UTSW |
2 |
88,648,043 (GRCm39) |
missense |
possibly damaging |
0.64 |
|
R9459:Or4c105
|
UTSW |
2 |
88,647,967 (GRCm39) |
missense |
probably benign |
0.12 |
|
| Predicted Primers |
PCR Primer
(F):5'- ATTCAATGGATGCATGACCCAAG -3'
(R):5'- TCCTTAGGGAGTTAAGAATGACC -3'
Sequencing Primer
(F):5'- GCATGACCCAAGTTTTTGCAG -3'
(R):5'- TTAGGGAGTTAAGAATGACCAGGTAG -3'
|
| Posted On |
2022-11-14 |
Incidental Mutation