Incidental Mutation 'IGL01310:Vmn2r4'
ID 73663
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn2r4
Ensembl Gene ENSMUSG00000092049
Gene Name vomeronasal 2, receptor 4
Synonyms EG637053
Accession Numbers
Essential gene? Probably non essential (E-score: 0.066) question?
Stock # IGL01310
Quality Score
Status
Chromosome 3
Chromosomal Location 64295982-64322741 bp(-) (GRCm39)
Type of Mutation splice site (3 bp from exon)
DNA Base Change (assembly) T to A at 64317200 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000135228 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000170280] [ENSMUST00000175724]
AlphaFold K7N784
Predicted Effect probably null
Transcript: ENSMUST00000170280
SMART Domains Protein: ENSMUSP00000127513
Gene: ENSMUSG00000092049

DomainStartEndE-ValueType
Pfam:ANF_receptor 1 416 2.7e-72 PFAM
Pfam:Peripla_BP_6 61 240 1.9e-9 PFAM
Pfam:NCD3G 458 511 1.1e-17 PFAM
Pfam:7tm_3 542 779 1.8e-75 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000175724
SMART Domains Protein: ENSMUSP00000135228
Gene: ENSMUSG00000092049

DomainStartEndE-ValueType
signal peptide 1 22 N/A INTRINSIC
Pfam:ANF_receptor 88 505 2.3e-75 PFAM
Pfam:NCD3G 547 600 4.7e-17 PFAM
Pfam:7tm_3 633 867 8.2e-47 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 50 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930431F12Rik A T 5: 45,125,156 (GRCm39) noncoding transcript Het
Abca12 A T 1: 71,323,315 (GRCm39) I1589N probably benign Het
Abca8a T G 11: 109,950,801 (GRCm39) D888A probably benign Het
Adam5 C T 8: 25,232,150 (GRCm39) probably benign Het
Amer1 A T X: 94,470,716 (GRCm39) N467K probably benign Het
Atp6v0a2 A G 5: 124,783,968 (GRCm39) D272G probably damaging Het
Cacna1b A T 2: 24,575,794 (GRCm39) N751K probably damaging Het
Cfi T A 3: 129,652,080 (GRCm39) N250K probably damaging Het
Cndp2 G T 18: 84,689,002 (GRCm39) P260Q possibly damaging Het
Cnnm3 A G 1: 36,551,956 (GRCm39) D322G probably benign Het
Crybg1 A T 10: 43,851,054 (GRCm39) S1606T possibly damaging Het
Crybg1 A G 10: 43,879,596 (GRCm39) S531P probably damaging Het
Espnl A T 1: 91,268,333 (GRCm39) K320* probably null Het
Glt1d1 A G 5: 127,709,384 (GRCm39) T13A possibly damaging Het
Gpam C T 19: 55,066,764 (GRCm39) A584T possibly damaging Het
Gpr19 A G 6: 134,846,705 (GRCm39) I289T probably damaging Het
Grm8 T C 6: 27,363,800 (GRCm39) I572V probably damaging Het
Gtpbp4 A T 13: 9,027,308 (GRCm39) N502K probably benign Het
Herpud2 T C 9: 25,062,247 (GRCm39) M6V probably benign Het
Igdcc3 T C 9: 65,085,724 (GRCm39) V263A probably damaging Het
Il33 G A 19: 29,930,156 (GRCm39) A65T probably benign Het
Itga9 T A 9: 118,598,227 (GRCm39) M1K probably null Het
Izumo3 T C 4: 92,035,217 (GRCm39) probably benign Het
Kdr G A 5: 76,110,261 (GRCm39) P909S probably damaging Het
Kirrel1 C T 3: 86,997,182 (GRCm39) E262K probably benign Het
Krt25 T A 11: 99,208,996 (GRCm39) Q278L probably benign Het
Lgi2 G T 5: 52,711,807 (GRCm39) P195Q probably benign Het
Lpcat3 T C 6: 124,676,301 (GRCm39) F120S possibly damaging Het
Nalcn C T 14: 123,554,661 (GRCm39) R910Q probably benign Het
Nrxn1 A G 17: 90,366,902 (GRCm39) probably null Het
Nuf2 A T 1: 169,326,431 (GRCm39) V440E probably benign Het
Or10ag60 T A 2: 87,437,852 (GRCm39) I40N possibly damaging Het
Or4f14 C T 2: 111,742,652 (GRCm39) V208M probably benign Het
Or51ah3 C T 7: 103,210,008 (GRCm39) S108F probably benign Het
Or6c205 T C 10: 129,086,865 (GRCm39) I154T possibly damaging Het
Pfpl A G 19: 12,405,974 (GRCm39) D75G probably damaging Het
Pgm5 A G 19: 24,812,130 (GRCm39) V134A possibly damaging Het
Prkch A G 12: 73,805,787 (GRCm39) I521V possibly damaging Het
Rps6kc1 T A 1: 190,515,822 (GRCm39) E968V probably benign Het
Slc25a30 T C 14: 76,007,037 (GRCm39) Y153C probably damaging Het
Smtnl2 T A 11: 72,292,171 (GRCm39) probably null Het
Spmip4 C A 6: 50,551,175 (GRCm39) V425L probably benign Het
Tbc1d14 T A 5: 36,700,544 (GRCm39) K275* probably null Het
Tnc T C 4: 63,931,314 (GRCm39) T799A probably benign Het
Trdn A T 10: 33,181,094 (GRCm39) probably benign Het
Ttn T C 2: 76,706,879 (GRCm39) probably benign Het
Uaca T C 9: 60,779,507 (GRCm39) M1296T probably benign Het
Ubash3a A C 17: 31,434,116 (GRCm39) I154L probably benign Het
Xpc T C 6: 91,467,089 (GRCm39) K915E probably benign Het
Zfp318 T C 17: 46,724,153 (GRCm39) I2052T possibly damaging Het
Other mutations in Vmn2r4
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01448:Vmn2r4 APN 3 64,313,816 (GRCm39) missense probably damaging 0.99
IGL01452:Vmn2r4 APN 3 64,313,816 (GRCm39) missense probably damaging 0.99
IGL01454:Vmn2r4 APN 3 64,313,816 (GRCm39) missense probably damaging 0.99
IGL01456:Vmn2r4 APN 3 64,313,816 (GRCm39) missense probably damaging 0.99
IGL01463:Vmn2r4 APN 3 64,313,816 (GRCm39) missense probably damaging 0.99
IGL01467:Vmn2r4 APN 3 64,313,816 (GRCm39) missense probably damaging 0.99
IGL01468:Vmn2r4 APN 3 64,313,816 (GRCm39) missense probably damaging 0.99
IGL01470:Vmn2r4 APN 3 64,313,816 (GRCm39) missense probably damaging 0.99
IGL01476:Vmn2r4 APN 3 64,313,816 (GRCm39) missense probably damaging 0.99
IGL01481:Vmn2r4 APN 3 64,313,816 (GRCm39) missense probably damaging 0.99
IGL01534:Vmn2r4 APN 3 64,313,844 (GRCm39) missense probably damaging 1.00
IGL01636:Vmn2r4 APN 3 64,313,657 (GRCm39) missense probably benign 0.21
IGL01879:Vmn2r4 APN 3 64,298,431 (GRCm39) missense probably damaging 1.00
IGL02147:Vmn2r4 APN 3 64,305,782 (GRCm39) splice site probably benign
IGL02276:Vmn2r4 APN 3 64,313,877 (GRCm39) missense possibly damaging 0.95
IGL02432:Vmn2r4 APN 3 64,313,821 (GRCm39) missense probably benign 0.38
IGL02533:Vmn2r4 APN 3 64,305,840 (GRCm39) nonsense probably null
IGL02655:Vmn2r4 APN 3 64,305,886 (GRCm39) missense probably damaging 0.97
IGL02666:Vmn2r4 APN 3 64,296,433 (GRCm39) missense probably benign 0.10
IGL02902:Vmn2r4 APN 3 64,314,337 (GRCm39) missense probably benign 0.22
IGL03189:Vmn2r4 APN 3 64,296,589 (GRCm39) missense possibly damaging 0.89
IGL03250:Vmn2r4 APN 3 64,314,063 (GRCm39) missense probably damaging 1.00
IGL03271:Vmn2r4 APN 3 64,305,850 (GRCm39) missense probably benign 0.01
R0310:Vmn2r4 UTSW 3 64,296,855 (GRCm39) nonsense probably null
R0504:Vmn2r4 UTSW 3 64,296,784 (GRCm39) missense probably damaging 1.00
R1546:Vmn2r4 UTSW 3 64,314,309 (GRCm39) missense probably damaging 1.00
R1562:Vmn2r4 UTSW 3 64,296,865 (GRCm39) missense probably damaging 0.98
R1863:Vmn2r4 UTSW 3 64,314,410 (GRCm39) missense probably benign 0.33
R1873:Vmn2r4 UTSW 3 64,298,479 (GRCm39) missense possibly damaging 0.93
R1939:Vmn2r4 UTSW 3 64,305,976 (GRCm39) missense probably benign 0.00
R2103:Vmn2r4 UTSW 3 64,322,704 (GRCm39) missense possibly damaging 0.48
R3083:Vmn2r4 UTSW 3 64,296,788 (GRCm39) missense probably damaging 1.00
R3687:Vmn2r4 UTSW 3 64,296,896 (GRCm39) missense possibly damaging 0.93
R3707:Vmn2r4 UTSW 3 64,296,895 (GRCm39) missense probably damaging 0.99
R3963:Vmn2r4 UTSW 3 64,322,572 (GRCm39) missense probably damaging 0.99
R4428:Vmn2r4 UTSW 3 64,322,590 (GRCm39) missense probably damaging 1.00
R4710:Vmn2r4 UTSW 3 64,317,201 (GRCm39) critical splice donor site probably null
R4737:Vmn2r4 UTSW 3 64,317,384 (GRCm39) missense probably damaging 1.00
R4767:Vmn2r4 UTSW 3 64,298,397 (GRCm39) missense probably damaging 0.99
R4776:Vmn2r4 UTSW 3 64,296,082 (GRCm39) missense probably damaging 0.96
R4834:Vmn2r4 UTSW 3 64,317,484 (GRCm39) missense probably benign 0.40
R4893:Vmn2r4 UTSW 3 64,313,676 (GRCm39) missense probably damaging 0.96
R4908:Vmn2r4 UTSW 3 64,296,476 (GRCm39) missense possibly damaging 0.59
R5049:Vmn2r4 UTSW 3 64,306,019 (GRCm39) splice site probably null
R5092:Vmn2r4 UTSW 3 64,298,373 (GRCm39) missense probably benign 0.01
R5234:Vmn2r4 UTSW 3 64,305,878 (GRCm39) missense possibly damaging 0.88
R5240:Vmn2r4 UTSW 3 64,314,358 (GRCm39) missense possibly damaging 0.53
R5704:Vmn2r4 UTSW 3 64,317,370 (GRCm39) missense probably benign 0.03
R5897:Vmn2r4 UTSW 3 64,322,687 (GRCm39) nonsense probably null
R5907:Vmn2r4 UTSW 3 64,298,487 (GRCm39) missense probably damaging 0.99
R5924:Vmn2r4 UTSW 3 64,296,685 (GRCm39) missense probably damaging 1.00
R6145:Vmn2r4 UTSW 3 64,314,364 (GRCm39) missense probably benign 0.00
R6191:Vmn2r4 UTSW 3 64,322,702 (GRCm39) missense probably benign 0.34
R6192:Vmn2r4 UTSW 3 64,322,699 (GRCm39) missense probably benign 0.00
R6207:Vmn2r4 UTSW 3 64,313,926 (GRCm39) missense probably damaging 1.00
R6457:Vmn2r4 UTSW 3 64,317,378 (GRCm39) missense probably damaging 1.00
R6533:Vmn2r4 UTSW 3 64,322,519 (GRCm39) missense probably benign
R6545:Vmn2r4 UTSW 3 64,313,777 (GRCm39) missense possibly damaging 0.50
R6594:Vmn2r4 UTSW 3 64,296,731 (GRCm39) missense probably damaging 1.00
R7049:Vmn2r4 UTSW 3 64,296,550 (GRCm39) missense probably benign 0.14
R7150:Vmn2r4 UTSW 3 64,305,898 (GRCm39) missense probably benign 0.01
R7187:Vmn2r4 UTSW 3 64,322,681 (GRCm39) missense probably benign 0.00
R7363:Vmn2r4 UTSW 3 64,314,432 (GRCm39) missense probably damaging 1.00
R7477:Vmn2r4 UTSW 3 64,305,850 (GRCm39) missense probably benign 0.01
R7675:Vmn2r4 UTSW 3 64,322,657 (GRCm39) missense probably benign 0.01
R7858:Vmn2r4 UTSW 3 64,317,226 (GRCm39) missense probably benign 0.00
R7888:Vmn2r4 UTSW 3 64,313,943 (GRCm39) missense probably damaging 0.99
R8678:Vmn2r4 UTSW 3 64,314,391 (GRCm39) missense probably benign
R8743:Vmn2r4 UTSW 3 64,317,247 (GRCm39) missense possibly damaging 0.95
R8841:Vmn2r4 UTSW 3 64,314,058 (GRCm39) missense probably damaging 0.97
R9671:Vmn2r4 UTSW 3 64,317,271 (GRCm39) missense probably benign 0.00
R9778:Vmn2r4 UTSW 3 64,322,497 (GRCm39) missense probably benign 0.15
X0019:Vmn2r4 UTSW 3 64,314,057 (GRCm39) missense probably damaging 0.99
Posted On 2013-10-07