Incidental Mutation 'IGL01316:Parp1'
ID73865
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Parp1
Ensembl Gene ENSMUSG00000026496
Gene Namepoly (ADP-ribose) polymerase family, member 1
SynonymsAdprp, 5830444G22Rik, PARP, sPARP-1, parp-1, Adprt1
Accession Numbers
Is this an essential gene? Possibly essential (E-score: 0.609) question?
Stock #IGL01316
Quality Score
Status
Chromosome1
Chromosomal Location180568924-180601254 bp(+) (GRCm38)
Type of Mutationsplice site
DNA Base Change (assembly) A to G at 180592935 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000027777 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000027777]
Predicted Effect probably benign
Transcript: ENSMUST00000027777
SMART Domains Protein: ENSMUSP00000027777
Gene: ENSMUSG00000026496

DomainStartEndE-ValueType
zf-PARP 12 90 4.73e-36 SMART
zf-PARP 116 200 3.99e-34 SMART
low complexity region 221 234 N/A INTRINSIC
PADR1 280 333 1.48e-28 SMART
low complexity region 359 378 N/A INTRINSIC
BRCT 388 467 9.62e-7 SMART
low complexity region 494 512 N/A INTRINSIC
WGR 553 633 2.36e-31 SMART
Pfam:PARP_reg 663 794 4e-54 PFAM
Pfam:PARP 797 1007 6.4e-79 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000191639
Predicted Effect noncoding transcript
Transcript: ENSMUST00000192411
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a chromatin-associated enzyme, poly(ADP-ribosyl)transferase, which modifies various nuclear proteins by poly(ADP-ribosyl)ation. The modification is dependent on DNA and is involved in the regulation of various important cellular processes such as differentiation, proliferation, and tumor transformation and also in the regulation of the molecular events involved in the recovery of cell from DNA damage. In addition, this enzyme may be the site of mutation in Fanconi anemia, and may participate in the pathophysiology of type I diabetes. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygous ablation of this gene may lead to skin hyperplasia, extreme sensitivity to radiation and alkylating agents, abnormal response to xenobiotics and endogenous compounds, reduced noise-induced hearing loss, altered susceptibility to neurotoxicity,or protection against renal ischemic injury. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 31 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca4 T C 3: 122,141,755 V326A probably damaging Het
Aldh1l1 A G 6: 90,598,380 D883G probably damaging Het
Ankk1 A G 9: 49,420,484 probably benign Het
Cacna1s T C 1: 136,118,964 V1796A probably benign Het
Ccdc186 A C 19: 56,813,413 C91G probably benign Het
Clec5a T C 6: 40,582,262 T63A probably benign Het
Cyp3a11 T A 5: 145,855,151 K477N possibly damaging Het
Dram2 T A 3: 106,572,980 V116E possibly damaging Het
Dram2 T C 3: 106,571,634 Y181H probably benign Het
Eps15l1 A T 8: 72,389,414 F184L possibly damaging Het
Greb1 T A 12: 16,698,586 H1102L probably benign Het
Inpp5f G A 7: 128,690,706 probably benign Het
Kcng1 T C 2: 168,269,040 N68S probably damaging Het
Klhl41 A G 2: 69,674,724 D457G probably benign Het
Krt2 T C 15: 101,811,211 R675G probably benign Het
Med13l T A 5: 118,762,781 V2200D probably damaging Het
Mme T A 3: 63,340,159 probably benign Het
Nexn A T 3: 152,247,233 F283L probably benign Het
Noxa1 T C 2: 25,086,011 D389G probably benign Het
Olfr135 A G 17: 38,208,497 N84S probably damaging Het
Olfr836 A G 9: 19,121,422 I156V probably benign Het
Pirt T C 11: 66,925,946 S28P probably damaging Het
Ros1 A G 10: 52,087,879 probably null Het
Sdk2 T C 11: 113,867,965 T478A probably benign Het
Secisbp2 T C 13: 51,654,516 S106P probably benign Het
Shroom1 C T 11: 53,465,558 A416V probably damaging Het
Ski C T 4: 155,221,686 A279T probably damaging Het
Stxbp4 A G 11: 90,621,649 probably benign Het
Tab2 A G 10: 7,924,704 V28A probably damaging Het
Tmem126a G A 7: 90,452,719 P91S probably damaging Het
Ucma T C 2: 4,981,231 probably benign Het
Other mutations in Parp1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01147:Parp1 APN 1 180589580 missense probably damaging 0.99
IGL01915:Parp1 APN 1 180598342 missense probably damaging 1.00
IGL02016:Parp1 APN 1 180598951 unclassified probably null
IGL03328:Parp1 APN 1 180599590 splice site probably benign
IGL03348:Parp1 APN 1 180577707 splice site probably benign
IGL03368:Parp1 APN 1 180580622 missense probably benign 0.01
R0541:Parp1 UTSW 1 180599051 missense probably benign 0.05
R0648:Parp1 UTSW 1 180600440 splice site probably benign
R1326:Parp1 UTSW 1 180600458 missense probably damaging 1.00
R1421:Parp1 UTSW 1 180600088 splice site probably benign
R1438:Parp1 UTSW 1 180591242 missense probably benign 0.08
R1781:Parp1 UTSW 1 180588013 missense probably benign 0.04
R1800:Parp1 UTSW 1 180600526 intron probably null
R1900:Parp1 UTSW 1 180597339 missense probably damaging 0.98
R1903:Parp1 UTSW 1 180588670 missense probably damaging 1.00
R2869:Parp1 UTSW 1 180573665 missense probably damaging 1.00
R2869:Parp1 UTSW 1 180573665 missense probably damaging 1.00
R2871:Parp1 UTSW 1 180573665 missense probably damaging 1.00
R2871:Parp1 UTSW 1 180573665 missense probably damaging 1.00
R2872:Parp1 UTSW 1 180573665 missense probably damaging 1.00
R2872:Parp1 UTSW 1 180573665 missense probably damaging 1.00
R2873:Parp1 UTSW 1 180573665 missense probably damaging 1.00
R2874:Parp1 UTSW 1 180573665 missense probably damaging 1.00
R4342:Parp1 UTSW 1 180587329 missense probably benign 0.00
R4510:Parp1 UTSW 1 180591276 missense possibly damaging 0.59
R4511:Parp1 UTSW 1 180591276 missense possibly damaging 0.59
R4529:Parp1 UTSW 1 180591312 missense probably damaging 1.00
R4740:Parp1 UTSW 1 180589468 missense probably damaging 0.99
R4876:Parp1 UTSW 1 180569035 start codon destroyed probably null 1.00
R6666:Parp1 UTSW 1 180585951 missense probably benign
R6766:Parp1 UTSW 1 180598362 missense probably damaging 1.00
R6918:Parp1 UTSW 1 180588670 missense possibly damaging 0.46
R6974:Parp1 UTSW 1 180589506 nonsense probably null
R6996:Parp1 UTSW 1 180587371 missense possibly damaging 0.46
R7034:Parp1 UTSW 1 180598252 missense possibly damaging 0.94
R7036:Parp1 UTSW 1 180598252 missense possibly damaging 0.94
R7068:Parp1 UTSW 1 180588668 missense probably damaging 1.00
R7156:Parp1 UTSW 1 180599064 missense possibly damaging 0.91
R7326:Parp1 UTSW 1 180569100 missense possibly damaging 0.94
R7603:Parp1 UTSW 1 180600212 critical splice donor site probably null
R7733:Parp1 UTSW 1 180600212 critical splice donor site probably null
R7772:Parp1 UTSW 1 180589398 missense possibly damaging 0.54
Posted On2013-10-07