Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01343:Crnn'

74959

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Crnn

Ensembl Gene

ENSMUSG00000078657

Gene Name

cornulin

Synonyms

LOC381457

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.055) question?

Stock #

IGL01343

Quality Score

Status

Chromosome

Chromosomal Location

93052096-93057125 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 93055633 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Arginine to Glycine at position 140 (R140G)

Ref Sequence

ENSEMBL: ENSMUSP00000141980 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000107300] [ENSMUST00000195515]

AlphaFold

D3YUU6

Predicted Effect

probably benign
Transcript: ENSMUST00000107300
AA Change: R140G

PolyPhen 2 Score 0.011 (Sensitivity: 0.96; Specificity: 0.78)

SMART Domains

Protein: ENSMUSP00000102921
Gene: ENSMUSG00000078657
AA Change: R140G

Domain	Start	End	E-Value	Type
Pfam:S_100	4	45	1.9e-12	PFAM
Blast:EFh	53	81	1e-10	BLAST
low complexity region	181	192	N/A	INTRINSIC

Predicted Effect

unknown
Transcript: ENSMUST00000192372
AA Change: R39G

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000192830

Predicted Effect

probably benign
Transcript: ENSMUST00000195515
AA Change: R140G

PolyPhen 2 Score 0.011 (Sensitivity: 0.96; Specificity: 0.78)

SMART Domains

Protein: ENSMUSP00000141980
Gene: ENSMUSG00000078657
AA Change: R140G

Domain	Start	End	E-Value	Type
Pfam:S_100	4	47	1.2e-10	PFAM
Blast:EFh	53	81	1e-10	BLAST
low complexity region	181	192	N/A	INTRINSIC

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the "fused gene" family of proteins, which contain N-terminus EF-hand domains and multiple tandem peptide repeats. The encoded protein contains two EF-hand Ca2+ binding domains in its N-terminus and two glutamine- and threonine-rich 60 amino acid repeats in its C-terminus. This gene, also known as squamous epithelial heat shock protein 53, may play a role in the mucosal/epithelial immune response and epidermal differentiation. [provided by RefSeq, Jan 2009]

Allele List at MGI

Other mutations in this stock

Total: 56 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcd2	A	T	15: 91,033,416 (GRCm39)		probably benign	Het
Adgrf1	T	A	17: 43,624,086 (GRCm39)	F835L	probably null	Het
Akp3	G	T	1: 87,054,858 (GRCm39)		probably benign	Het
BC106179	G	T	16: 23,043,037 (GRCm39)		probably benign	Het
Bysl	C	A	17: 47,912,814 (GRCm39)	M325I	probably benign	Het
Cip2a	A	G	16: 48,833,551 (GRCm39)	I551V	probably damaging	Het
Cts8	T	C	13: 61,397,010 (GRCm39)		probably benign	Het
Cxcr4	T	C	1: 128,517,292 (GRCm39)	Y121C	probably damaging	Het
Ddr2	T	C	1: 169,812,150 (GRCm39)	T691A	probably benign	Het
Dhx30	A	T	9: 109,915,313 (GRCm39)	F782I	probably benign	Het
Efcab5	C	T	11: 77,020,756 (GRCm39)	G655D	probably damaging	Het
Eif2ak4	G	A	2: 118,252,570 (GRCm39)	V381I	probably benign	Het
Enpp3	A	T	10: 24,681,820 (GRCm39)	Y295*	probably null	Het
Fbxo28	T	C	1: 182,144,577 (GRCm39)	E329G	probably damaging	Het
Fcgbpl1	A	G	7: 27,850,127 (GRCm39)	Q1191R	probably benign	Het
Fmnl2	T	A	2: 53,013,557 (GRCm39)	V972D	probably damaging	Het
Fmr1	A	G	X: 67,731,901 (GRCm39)	D22G	probably damaging	Het
Fsip2	A	G	2: 82,830,163 (GRCm39)	T6886A	possibly damaging	Het
Gadl1	A	G	9: 115,903,180 (GRCm39)	*503W	probably null	Het
Gpc6	A	T	14: 117,424,224 (GRCm39)	K104I	possibly damaging	Het
Hecw2	T	A	1: 53,866,135 (GRCm39)	T1509S	probably damaging	Het
Lonp1	A	G	17: 56,922,586 (GRCm39)	L680P	possibly damaging	Het
Lrrc66	A	T	5: 73,765,806 (GRCm39)	N412K	probably damaging	Het
Marco	C	T	1: 120,422,469 (GRCm39)		probably null	Het
Mdga2	T	C	12: 66,769,883 (GRCm39)	T206A	probably damaging	Het
Mogat2	C	A	7: 98,881,775 (GRCm39)	A54S	possibly damaging	Het
Myh15	T	A	16: 48,976,040 (GRCm39)	D1369E	probably benign	Het
Nckap1	A	T	2: 80,350,186 (GRCm39)	S840T	possibly damaging	Het
Ncor1	C	T	11: 62,216,312 (GRCm39)		probably null	Het
Nfrkb	C	A	9: 31,300,250 (GRCm39)	L14I	probably damaging	Het
Notch1	C	A	2: 26,362,917 (GRCm39)	A950S	probably benign	Het
Notch3	T	C	17: 32,362,410 (GRCm39)	E1405G	probably benign	Het
Nsd2	C	A	5: 34,000,922 (GRCm39)	D146E	probably damaging	Het
Oc90	T	C	15: 65,761,440 (GRCm39)	T193A	probably benign	Het
Or7c70	A	T	10: 78,683,431 (GRCm39)	V106E	probably damaging	Het
Or8g50	C	A	9: 39,649,011 (GRCm39)	A300D	probably damaging	Het
Or8k40	T	A	2: 86,584,843 (GRCm39)	K80*	probably null	Het
Orc2	A	T	1: 58,532,014 (GRCm39)		probably null	Het
Pacsin2	T	C	15: 83,270,887 (GRCm39)	H254R	probably damaging	Het
Pif1	T	A	9: 65,496,844 (GRCm39)	M319K	probably damaging	Het
Prag1	G	A	8: 36,570,200 (GRCm39)	R261H	possibly damaging	Het
Ptprq	G	A	10: 107,474,700 (GRCm39)	T1335I	probably damaging	Het
Ryr3	A	G	2: 112,490,399 (GRCm39)	Y3812H	probably damaging	Het
Sgo2b	G	A	8: 64,380,349 (GRCm39)	Q828*	probably null	Het
Skint6	A	G	4: 113,140,823 (GRCm39)	V6A	probably benign	Het
Slc16a13	A	G	11: 70,111,340 (GRCm39)	I55T	probably damaging	Het
Slc22a3	A	T	17: 12,644,516 (GRCm39)	W490R	probably damaging	Het
Speer4b	G	T	5: 27,702,881 (GRCm39)	H208N	probably benign	Het
Tas2r124	T	C	6: 132,732,378 (GRCm39)	L229S	probably damaging	Het
Tlr4	T	C	4: 66,752,124 (GRCm39)		probably benign	Het
Tmed1	G	T	9: 21,421,369 (GRCm39)	T35K	probably damaging	Het
Tubgcp5	C	A	7: 55,445,779 (GRCm39)		probably benign	Het
Ugt2b34	A	G	5: 87,052,247 (GRCm39)	S250P	possibly damaging	Het
Zfp516	A	G	18: 83,011,221 (GRCm39)	T1085A	probably damaging	Het
Znfx1	T	C	2: 166,879,283 (GRCm39)	I1698V	probably benign	Het
Zswim8	G	T	14: 20,763,409 (GRCm39)	W385C	probably damaging	Het

Other mutations in Crnn

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01320:Crnn	APN	3	93,055,519 (GRCm39)	missense	probably damaging	1.00
IGL02393:Crnn	APN	3	93,056,675 (GRCm39)	missense	probably damaging	0.99
IGL03220:Crnn	APN	3	93,056,674 (GRCm39)	missense	possibly damaging	0.49
IGL03275:Crnn	APN	3	93,056,725 (GRCm39)	missense	possibly damaging	0.57
R1698:Crnn	UTSW	3	93,055,765 (GRCm39)	missense	probably damaging	0.97
R1745:Crnn	UTSW	3	93,054,198 (GRCm39)	missense	probably benign	0.33
R1761:Crnn	UTSW	3	93,055,958 (GRCm39)	missense	probably benign
R1974:Crnn	UTSW	3	93,056,594 (GRCm39)	missense	probably benign	0.01
R2109:Crnn	UTSW	3	93,055,747 (GRCm39)	missense	probably benign	0.43
R4179:Crnn	UTSW	3	93,054,120 (GRCm39)	start codon destroyed	probably null	1.00
R4976:Crnn	UTSW	3	93,055,990 (GRCm39)	missense	probably benign	0.12
R5120:Crnn	UTSW	3	93,056,203 (GRCm39)	missense	probably benign	0.03
R5425:Crnn	UTSW	3	93,056,456 (GRCm39)	missense	probably benign
R5695:Crnn	UTSW	3	93,056,330 (GRCm39)	missense	probably damaging	0.98
R6596:Crnn	UTSW	3	93,054,182 (GRCm39)	missense	probably damaging	1.00
R6981:Crnn	UTSW	3	93,055,442 (GRCm39)	missense	probably damaging	1.00
R7145:Crnn	UTSW	3	93,055,689 (GRCm39)	missense	probably damaging	1.00
R7170:Crnn	UTSW	3	93,056,020 (GRCm39)	missense	possibly damaging	0.85
R7365:Crnn	UTSW	3	93,055,841 (GRCm39)	missense	probably damaging	0.97
R7375:Crnn	UTSW	3	93,056,452 (GRCm39)	missense	possibly damaging	0.87
R7511:Crnn	UTSW	3	93,056,723 (GRCm39)	missense	probably damaging	1.00
R8669:Crnn	UTSW	3	93,056,296 (GRCm39)	nonsense	probably null
R8868:Crnn	UTSW	3	93,055,609 (GRCm39)	missense	probably benign	0.00
R9206:Crnn	UTSW	3	93,054,251 (GRCm39)	missense	possibly damaging	0.58
Z1177:Crnn	UTSW	3	93,056,603 (GRCm39)	missense	probably damaging	1.00

Posted On

2013-10-07