Incidental Mutation 'IGL01300:Vnn3'
ID 75231
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vnn3
Ensembl Gene ENSMUSG00000020010
Gene Name vanin 3
Synonyms
Accession Numbers
Essential gene? Probably non essential (E-score: 0.055) question?
Stock # IGL01300
Quality Score
Status
Chromosome 10
Chromosomal Location 23727360-23745741 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 23740263 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Isoleucine at position 189 (F189I)
Ref Sequence ENSEMBL: ENSMUSP00000020190 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000020190]
AlphaFold Q9QZ25
Predicted Effect possibly damaging
Transcript: ENSMUST00000020190
AA Change: F189I

PolyPhen 2 Score 0.870 (Sensitivity: 0.83; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000020190
Gene: ENSMUSG00000020010
AA Change: F189I

DomainStartEndE-ValueType
signal peptide 1 22 N/A INTRINSIC
Pfam:CN_hydrolase 51 296 6.9e-19 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 33 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Anxa8 A G 14: 33,821,700 (GRCm39) D300G probably benign Het
Cacna1g T C 11: 94,324,738 (GRCm39) H1161R probably benign Het
Col14a1 G A 15: 55,331,372 (GRCm39) R1471Q unknown Het
Gm14496 A T 2: 181,642,753 (GRCm39) E808V probably damaging Het
Gm1968 T C 16: 29,781,038 (GRCm39) noncoding transcript Het
Gzmb G A 14: 56,497,653 (GRCm39) R196C probably benign Het
Hkdc1 A G 10: 62,231,040 (GRCm39) probably benign Het
Itgal T A 7: 126,913,290 (GRCm39) V629E probably damaging Het
Jak2 T A 19: 29,287,083 (GRCm39) Y1050N probably damaging Het
Lrrc69 C T 4: 14,773,663 (GRCm39) probably benign Het
Mmd T C 11: 90,140,537 (GRCm39) M1T probably null Het
Myh6 A G 14: 55,200,548 (GRCm39) V191A possibly damaging Het
Mynn A G 3: 30,667,755 (GRCm39) N485S probably damaging Het
Naa30 C T 14: 49,410,714 (GRCm39) T214M probably damaging Het
Ncoa3 A T 2: 165,910,381 (GRCm39) T1265S probably benign Het
Or10al2 C A 17: 37,983,778 (GRCm39) T288K probably damaging Het
Or1j10 T C 2: 36,267,054 (GRCm39) S89P probably benign Het
Prex1 A G 2: 166,480,327 (GRCm39) C138R possibly damaging Het
Prom2 A T 2: 127,377,009 (GRCm39) L535H probably benign Het
Pros1 T C 16: 62,734,174 (GRCm39) F327L possibly damaging Het
Ros1 A G 10: 51,977,809 (GRCm39) M1479T probably benign Het
Scn9a G A 2: 66,318,397 (GRCm39) Q1465* probably null Het
Serpinb3b A G 1: 107,083,573 (GRCm39) probably benign Het
Sipa1l3 G A 7: 29,099,253 (GRCm39) Q339* probably null Het
Slc34a2 A C 5: 53,225,469 (GRCm39) probably null Het
Smc3 T A 19: 53,630,283 (GRCm39) probably benign Het
Tmem30a A G 9: 79,682,382 (GRCm39) probably null Het
Trappc11 A T 8: 47,954,903 (GRCm39) D878E probably benign Het
Trrap C T 5: 144,741,628 (GRCm39) T1325M probably damaging Het
Ttc12 A T 9: 49,359,222 (GRCm39) probably benign Het
Vmn1r237 T A 17: 21,534,337 (GRCm39) I20N probably damaging Het
Vmn2r115 T A 17: 23,578,755 (GRCm39) S743T probably damaging Het
Vmn2r74 A G 7: 85,606,414 (GRCm39) Y311H probably benign Het
Other mutations in Vnn3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00675:Vnn3 APN 10 23,743,066 (GRCm39) missense possibly damaging 0.77
IGL01349:Vnn3 APN 10 23,727,814 (GRCm39) missense probably damaging 0.99
IGL02491:Vnn3 APN 10 23,741,816 (GRCm39) missense probably benign 0.11
IGL03256:Vnn3 APN 10 23,727,698 (GRCm39) splice site probably benign
IGL03289:Vnn3 APN 10 23,741,735 (GRCm39) missense possibly damaging 0.92
IGL02799:Vnn3 UTSW 10 23,727,869 (GRCm39) missense possibly damaging 0.64
R0599:Vnn3 UTSW 10 23,741,603 (GRCm39) missense possibly damaging 0.94
R1703:Vnn3 UTSW 10 23,741,828 (GRCm39) missense probably benign
R1753:Vnn3 UTSW 10 23,741,718 (GRCm39) missense probably benign 0.27
R2119:Vnn3 UTSW 10 23,740,311 (GRCm39) missense probably damaging 1.00
R2288:Vnn3 UTSW 10 23,740,354 (GRCm39) missense probably benign 0.03
R4255:Vnn3 UTSW 10 23,741,720 (GRCm39) missense probably benign 0.18
R4458:Vnn3 UTSW 10 23,741,567 (GRCm39) missense probably benign 0.23
R4518:Vnn3 UTSW 10 23,743,124 (GRCm39) missense possibly damaging 0.77
R4545:Vnn3 UTSW 10 23,732,224 (GRCm39) missense probably benign 0.00
R4723:Vnn3 UTSW 10 23,727,589 (GRCm39) missense possibly damaging 0.88
R4791:Vnn3 UTSW 10 23,740,519 (GRCm39) missense probably benign
R4921:Vnn3 UTSW 10 23,740,473 (GRCm39) missense probably benign 0.01
R5152:Vnn3 UTSW 10 23,740,237 (GRCm39) missense probably benign 0.01
R5390:Vnn3 UTSW 10 23,727,483 (GRCm39) start codon destroyed probably null 1.00
R5545:Vnn3 UTSW 10 23,742,992 (GRCm39) missense probably benign 0.00
R6197:Vnn3 UTSW 10 23,732,187 (GRCm39) missense probably damaging 1.00
R6751:Vnn3 UTSW 10 23,745,523 (GRCm39) missense probably benign 0.00
R6846:Vnn3 UTSW 10 23,727,620 (GRCm39) missense probably benign
R6917:Vnn3 UTSW 10 23,741,832 (GRCm39) missense possibly damaging 0.50
R7073:Vnn3 UTSW 10 23,740,311 (GRCm39) missense probably damaging 1.00
R7100:Vnn3 UTSW 10 23,741,840 (GRCm39) missense probably damaging 1.00
R7152:Vnn3 UTSW 10 23,727,513 (GRCm39) missense possibly damaging 0.88
R7336:Vnn3 UTSW 10 23,727,806 (GRCm39) missense probably benign 0.42
R7421:Vnn3 UTSW 10 23,741,666 (GRCm39) missense probably benign 0.06
R7875:Vnn3 UTSW 10 23,743,146 (GRCm39) missense possibly damaging 0.80
R8353:Vnn3 UTSW 10 23,745,443 (GRCm39) missense probably benign 0.01
R8453:Vnn3 UTSW 10 23,745,443 (GRCm39) missense probably benign 0.01
R8465:Vnn3 UTSW 10 23,741,780 (GRCm39) missense possibly damaging 0.67
R9105:Vnn3 UTSW 10 23,740,461 (GRCm39) missense probably damaging 1.00
R9261:Vnn3 UTSW 10 23,741,607 (GRCm39) missense probably damaging 0.97
R9441:Vnn3 UTSW 10 23,740,498 (GRCm39) missense possibly damaging 0.94
R9718:Vnn3 UTSW 10 23,745,454 (GRCm39) nonsense probably null
R9737:Vnn3 UTSW 10 23,741,813 (GRCm39) missense probably benign 0.02
Posted On 2013-10-07