Incidental Mutation 'IGL01351:Tktl2'
ID75343
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Tktl2
Ensembl Gene ENSMUSG00000025519
Gene Nametransketolase-like 2
Synonyms4933401I19Rik
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.401) question?
Stock #IGL01351
Quality Score
Status
Chromosome8
Chromosomal Location66511756-66518335 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to G at 66512896 bp
ZygosityHeterozygous
Amino Acid Change Isoleucine to Valine at position 369 (I369V)
Ref Sequence ENSEMBL: ENSMUSP00000138388 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000002025] [ENSMUST00000183187]
Predicted Effect probably benign
Transcript: ENSMUST00000002025
AA Change: I369V

PolyPhen 2 Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
SMART Domains Protein: ENSMUSP00000002025
Gene: ENSMUSG00000025519
AA Change: I369V

DomainStartEndE-ValueType
Pfam:DXP_synthase_N 2 195 2.4e-9 PFAM
Pfam:Transketolase_N 16 281 4.6e-50 PFAM
Pfam:TPP_enzyme_C 108 250 5.9e-8 PFAM
Pfam:E1_dh 111 249 2.9e-13 PFAM
Transket_pyr 320 484 3.74e-51 SMART
Pfam:Transketolase_C 495 617 1.4e-34 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000183187
AA Change: I369V

PolyPhen 2 Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
SMART Domains Protein: ENSMUSP00000138388
Gene: ENSMUSG00000025519
AA Change: I369V

DomainStartEndE-ValueType
Pfam:DXP_synthase_N 2 197 8.2e-9 PFAM
Pfam:Transketolase_N 16 280 2.2e-86 PFAM
Pfam:TPP_enzyme_C 108 250 5.9e-8 PFAM
Pfam:E1_dh 110 251 2.1e-14 PFAM
Transket_pyr 320 484 3.74e-51 SMART
Pfam:Transketolase_C 495 617 3.4e-30 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 38 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca13 T C 11: 9,267,565 S336P probably benign Het
Abca9 T C 11: 110,148,903 Y428C probably damaging Het
Alpk1 T C 3: 127,672,362 Q1165R probably damaging Het
Angel2 C A 1: 190,933,113 N80K probably benign Het
Bmp6 T C 13: 38,469,634 S226P probably damaging Het
Ccar2 T C 14: 70,145,862 T229A probably benign Het
Cdh12 G A 15: 21,237,903 V75M probably damaging Het
Cdh6 G T 15: 13,034,240 A778E possibly damaging Het
Corin A T 5: 72,338,991 C540S probably damaging Het
Cyfip1 C A 7: 55,898,243 Y530* probably null Het
Dock10 T G 1: 80,593,159 K327N probably damaging Het
Dpy19l3 A G 7: 35,727,415 probably benign Het
E2f8 T C 7: 48,867,151 T827A probably benign Het
Edem3 T C 1: 151,792,385 V305A possibly damaging Het
Fam170a T C 18: 50,281,778 W164R probably benign Het
Fam208a A G 14: 27,464,301 E819G probably benign Het
Fbxw14 T C 9: 109,274,572 D24G possibly damaging Het
Gnmt T C 17: 46,726,680 D124G probably benign Het
Gpx5 T C 13: 21,287,499 D178G probably damaging Het
Gsdmd T A 15: 75,864,337 I105N probably damaging Het
Hps5 C T 7: 46,761,432 M1113I probably damaging Het
Hyal6 T C 6: 24,734,179 F37S probably damaging Het
Il17c C T 8: 122,422,123 T2I probably benign Het
Lyz1 A G 10: 117,291,188 C48R probably damaging Het
Olfr670 T A 7: 104,960,739 probably benign Het
Pafah1b3 G A 7: 25,295,145 R215C possibly damaging Het
Psmb4 A T 3: 94,886,227 probably null Het
Rnf213 T C 11: 119,483,118 V5009A probably benign Het
Sema6a T C 18: 47,281,302 K494E possibly damaging Het
Sfmbt1 T C 14: 30,769,820 V17A probably benign Het
Speg T A 1: 75,411,276 probably benign Het
Spint1 A G 2: 119,246,455 D340G probably damaging Het
Tctn3 T C 19: 40,607,637 I309V probably benign Het
Tex19.1 T A 11: 121,147,246 D143E probably damaging Het
Tm2d2 A G 8: 25,020,557 probably benign Het
Traf4 C A 11: 78,165,400 R14L possibly damaging Het
Zfhx4 A G 3: 5,401,136 Y2118C probably damaging Het
Zmynd15 C A 11: 70,463,590 N425K probably benign Het
Other mutations in Tktl2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02444:Tktl2 APN 8 66513361 missense possibly damaging 0.60
IGL02798:Tktl2 APN 8 66513311 missense probably benign 0.06
IGL02938:Tktl2 APN 8 66512330 missense probably damaging 1.00
IGL03095:Tktl2 APN 8 66512284 missense probably damaging 1.00
R0530:Tktl2 UTSW 8 66513179 missense probably damaging 0.99
R0899:Tktl2 UTSW 8 66512347 missense probably damaging 0.98
R0900:Tktl2 UTSW 8 66512347 missense probably damaging 0.98
R1080:Tktl2 UTSW 8 66512347 missense probably damaging 0.98
R1419:Tktl2 UTSW 8 66513038 missense probably damaging 0.97
R1609:Tktl2 UTSW 8 66512852 missense probably benign 0.04
R1717:Tktl2 UTSW 8 66512347 missense probably damaging 0.98
R1718:Tktl2 UTSW 8 66512347 missense probably damaging 0.98
R1719:Tktl2 UTSW 8 66512347 missense probably damaging 0.98
R1848:Tktl2 UTSW 8 66512347 missense probably damaging 0.98
R1933:Tktl2 UTSW 8 66512347 missense probably damaging 0.98
R1934:Tktl2 UTSW 8 66512347 missense probably damaging 0.98
R2134:Tktl2 UTSW 8 66512347 missense probably damaging 0.98
R2135:Tktl2 UTSW 8 66512347 missense probably damaging 0.98
R2314:Tktl2 UTSW 8 66513143 missense probably damaging 1.00
R2509:Tktl2 UTSW 8 66512852 missense probably benign 0.04
R2511:Tktl2 UTSW 8 66512852 missense probably benign 0.04
R2965:Tktl2 UTSW 8 66512063 missense probably benign 0.01
R3084:Tktl2 UTSW 8 66513206 missense possibly damaging 0.88
R3085:Tktl2 UTSW 8 66513206 missense possibly damaging 0.88
R3121:Tktl2 UTSW 8 66512156 missense probably damaging 0.98
R3499:Tktl2 UTSW 8 66513245 missense probably damaging 0.97
R4227:Tktl2 UTSW 8 66513699 splice site probably null
R4284:Tktl2 UTSW 8 66513156 missense probably damaging 1.00
R4491:Tktl2 UTSW 8 66512012 missense probably damaging 0.96
R5478:Tktl2 UTSW 8 66513398 missense probably damaging 0.99
R5801:Tktl2 UTSW 8 66513647 missense probably benign 0.00
R6656:Tktl2 UTSW 8 66512729 missense probably benign
R6864:Tktl2 UTSW 8 66512339 missense probably damaging 1.00
R6915:Tktl2 UTSW 8 66513035 missense probably damaging 1.00
R7168:Tktl2 UTSW 8 66513101 missense probably damaging 1.00
R7442:Tktl2 UTSW 8 66512909 missense possibly damaging 0.95
R7617:Tktl2 UTSW 8 66512999 missense probably benign 0.07
R7687:Tktl2 UTSW 8 66513101 missense probably damaging 1.00
R8825:Tktl2 UTSW 8 66513667 missense possibly damaging 0.87
RF006:Tktl2 UTSW 8 66512852 missense probably benign 0.31
Posted On2013-10-07