Incidental Mutation 'R0830:Or10al6'
| ID |
77509 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or10al6
|
| Ensembl Gene |
ENSMUSG00000083947 |
| Gene Name |
olfactory receptor family 10 subfamily AL member 6 |
| Synonyms |
GA_x6K02T2PSCP-2230932-2231897, MOR263-10, Olfr122 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.088)
|
| Stock # |
R0830 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
17 |
| Chromosomal Location |
38079533-38083511 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to T
at 38082804 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Methionine to Leucine
at position 87
(M87L)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149334
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000119082]
[ENSMUST00000172582]
[ENSMUST00000217119]
|
| AlphaFold |
W4VSP0 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000119082
AA Change: M96L
PolyPhen 2
Score 0.905 (Sensitivity: 0.82; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000113170
Gene: ENSMUSG00000083947
AA Change: M96L
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
46 |
323 |
2.2e-58 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
50 |
320 |
2.7e-6 |
PFAM |
|
Pfam:7tm_1
|
56 |
305 |
3.8e-25 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000172582
AA Change: M87L
PolyPhen 2
Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
|
| SMART Domains |
Protein: ENSMUSP00000134283
Gene: ENSMUSG00000083947
AA Change: M87L
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7TM_GPCR_Srsx
|
41 |
311 |
9.5e-8 |
PFAM |
|
Pfam:7tm_1
|
47 |
296 |
7.8e-36 |
PFAM |
|
Pfam:7tm_4
|
145 |
289 |
1e-46 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000215449
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000217119
AA Change: M87L
PolyPhen 2
Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
|
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.4%
- 10x: 96.0%
- 20x: 90.6%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 41 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 1700056E22Rik |
C |
T |
1: 183,765,624 (GRCm39) |
R145H |
probably damaging |
Het |
| Adam26a |
C |
T |
8: 44,021,439 (GRCm39) |
V684I |
probably benign |
Het |
| Alk |
T |
C |
17: 72,910,195 (GRCm39) |
I170M |
probably benign |
Het |
| Apc2 |
T |
C |
10: 80,151,239 (GRCm39) |
Y2069H |
probably damaging |
Het |
| Aspm |
A |
G |
1: 139,401,992 (GRCm39) |
T1219A |
probably damaging |
Het |
| Bnip1 |
T |
C |
17: 27,008,679 (GRCm39) |
S94P |
probably benign |
Het |
| Cftr |
A |
G |
6: 18,270,224 (GRCm39) |
I805V |
probably benign |
Het |
| Col25a1 |
T |
A |
3: 130,378,375 (GRCm39) |
D609E |
probably damaging |
Het |
| Cplane1 |
T |
A |
15: 8,276,669 (GRCm39) |
V2771E |
unknown |
Het |
| Cyp2g1 |
A |
G |
7: 26,514,216 (GRCm39) |
K274R |
probably benign |
Het |
| D5Ertd579e |
G |
A |
5: 36,771,101 (GRCm39) |
T1098I |
probably damaging |
Het |
| Ddx39a |
T |
A |
8: 84,446,452 (GRCm39) |
C74S |
possibly damaging |
Het |
| E2f3 |
C |
T |
13: 30,169,543 (GRCm39) |
A37T |
probably benign |
Het |
| Emilin2 |
A |
G |
17: 71,580,815 (GRCm39) |
M637T |
probably benign |
Het |
| Exosc7 |
T |
C |
9: 122,948,358 (GRCm39) |
L93P |
probably benign |
Het |
| F2 |
T |
C |
2: 91,460,545 (GRCm39) |
E316G |
probably benign |
Het |
| Fat4 |
A |
C |
3: 39,053,258 (GRCm39) |
Q4084P |
probably benign |
Het |
| Flywch1 |
T |
C |
17: 23,981,344 (GRCm39) |
K160E |
probably benign |
Het |
| Foxi2 |
A |
G |
7: 135,013,459 (GRCm39) |
T230A |
probably benign |
Het |
| Fthl17a |
A |
G |
X: 84,313,679 (GRCm39) |
N154S |
possibly damaging |
Het |
| Hykk |
G |
A |
9: 54,844,601 (GRCm39) |
R222Q |
probably damaging |
Het |
| Il18rap |
T |
A |
1: 40,582,150 (GRCm39) |
V357E |
probably damaging |
Het |
| Ing4 |
A |
G |
6: 125,020,923 (GRCm39) |
E15G |
probably damaging |
Het |
| Irak1 |
T |
C |
X: 73,060,189 (GRCm39) |
D679G |
probably damaging |
Het |
| Itga1 |
T |
C |
13: 115,143,568 (GRCm39) |
E321G |
probably benign |
Het |
| Nudt1 |
T |
A |
5: 140,321,076 (GRCm39) |
|
probably null |
Het |
| Nup58 |
A |
G |
14: 60,480,931 (GRCm39) |
F138S |
probably damaging |
Het |
| Or2a5 |
G |
T |
6: 42,873,532 (GRCm39) |
W49L |
probably benign |
Het |
| Pllp |
T |
C |
8: 95,406,103 (GRCm39) |
Y60C |
probably damaging |
Het |
| Pnpla7 |
T |
C |
2: 24,887,267 (GRCm39) |
V37A |
probably damaging |
Het |
| Poglut3 |
T |
G |
9: 53,302,011 (GRCm39) |
L32R |
probably damaging |
Het |
| Psme4 |
A |
G |
11: 30,757,797 (GRCm39) |
H310R |
possibly damaging |
Het |
| Rasl10b |
G |
A |
11: 83,308,665 (GRCm39) |
|
probably null |
Het |
| Sash1 |
C |
T |
10: 8,605,673 (GRCm39) |
V906M |
probably benign |
Het |
| Scn1a |
A |
T |
2: 66,130,128 (GRCm39) |
I1212K |
probably damaging |
Het |
| Stbd1 |
A |
T |
5: 92,752,989 (GRCm39) |
S160C |
probably benign |
Het |
| Tex29 |
T |
C |
8: 11,904,157 (GRCm39) |
V99A |
probably benign |
Het |
| Tg |
A |
T |
15: 66,596,993 (GRCm39) |
N79I |
probably damaging |
Het |
| Tie1 |
T |
C |
4: 118,339,860 (GRCm39) |
D389G |
probably damaging |
Het |
| Vmn1r178 |
A |
G |
7: 23,593,452 (GRCm39) |
T167A |
possibly damaging |
Het |
| Xkr4 |
C |
T |
1: 3,740,968 (GRCm39) |
G202S |
possibly damaging |
Het |
|
| Other mutations in Or10al6 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00954:Or10al6
|
APN |
17 |
38,083,505 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL01338:Or10al6
|
APN |
17 |
38,082,730 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
IGL01447:Or10al6
|
APN |
17 |
38,083,122 (GRCm39) |
missense |
probably damaging |
1.00 |
|
PIT4514001:Or10al6
|
UTSW |
17 |
38,082,758 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0402:Or10al6
|
UTSW |
17 |
38,083,284 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2018:Or10al6
|
UTSW |
17 |
38,083,467 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4258:Or10al6
|
UTSW |
17 |
38,082,949 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6371:Or10al6
|
UTSW |
17 |
38,083,326 (GRCm39) |
missense |
probably benign |
|
|
R6481:Or10al6
|
UTSW |
17 |
38,083,194 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7468:Or10al6
|
UTSW |
17 |
38,082,910 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7492:Or10al6
|
UTSW |
17 |
38,082,571 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R8114:Or10al6
|
UTSW |
17 |
38,082,880 (GRCm39) |
missense |
possibly damaging |
0.67 |
|
R8172:Or10al6
|
UTSW |
17 |
38,083,326 (GRCm39) |
missense |
probably benign |
|
|
R8728:Or10al6
|
UTSW |
17 |
38,082,642 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8894:Or10al6
|
UTSW |
17 |
38,082,940 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9659:Or10al6
|
UTSW |
17 |
38,082,880 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Z1177:Or10al6
|
UTSW |
17 |
38,083,082 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
| Predicted Primers |
PCR Primer
(F):5'- CAAACGCTTTGCATTTGCCAAGTTC -3'
(R):5'- CAGGGTCCACAGAAGTTCAACGAG -3'
Sequencing Primer
(F):5'- CTCTGAGGTCCCTGGAGAATG -3'
(R):5'- TAAAATTGGTCTGTCCCAACCC -3'
|
| Posted On |
2013-10-16 |
Incidental Mutation