Incidental Mutation 'R0833:Clip1'
ID |
77628 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Clip1
|
Ensembl Gene |
ENSMUSG00000049550 |
Gene Name |
CAP-GLY domain containing linker protein 1 |
Synonyms |
Rsn, CLIP-170, 4631429H07Rik, restin, Clip 170, 1110007I12Rik, Clip50, cytoplasmic linker protein 50 |
MMRRC Submission |
039012-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R0833 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
5 |
Chromosomal Location |
123715857-123822527 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 123768784 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Aspartic acid to Glycine
at position 605
(D605G)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000107192
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000031382]
[ENSMUST00000063905]
[ENSMUST00000111561]
[ENSMUST00000111564]
[ENSMUST00000111566]
[ENSMUST00000149410]
|
AlphaFold |
Q922J3 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000031382
AA Change: D651G
PolyPhen 2
Score 0.047 (Sensitivity: 0.94; Specificity: 0.83)
|
SMART Domains |
Protein: ENSMUSP00000031382 Gene: ENSMUSG00000049550 AA Change: D651G
Domain | Start | End | E-Value | Type |
internal_repeat_2
|
11 |
53 |
2.28e-5 |
PROSPERO |
CAP_GLY
|
60 |
125 |
1.05e-31 |
SMART |
internal_repeat_2
|
140 |
177 |
2.28e-5 |
PROSPERO |
CAP_GLY
|
213 |
278 |
4.69e-34 |
SMART |
low complexity region
|
286 |
304 |
N/A |
INTRINSIC |
low complexity region
|
305 |
331 |
N/A |
INTRINSIC |
coiled coil region
|
349 |
451 |
N/A |
INTRINSIC |
coiled coil region
|
474 |
535 |
N/A |
INTRINSIC |
coiled coil region
|
581 |
620 |
N/A |
INTRINSIC |
coiled coil region
|
652 |
1352 |
N/A |
INTRINSIC |
low complexity region
|
1362 |
1373 |
N/A |
INTRINSIC |
Pfam:CLIP1_ZNF
|
1375 |
1392 |
5.8e-9 |
PFAM |
ZnF_C2HC
|
1417 |
1433 |
1.45e0 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000063905
AA Change: D640G
PolyPhen 2
Score 0.010 (Sensitivity: 0.96; Specificity: 0.77)
|
SMART Domains |
Protein: ENSMUSP00000068241 Gene: ENSMUSG00000049550 AA Change: D640G
Domain | Start | End | E-Value | Type |
internal_repeat_2
|
11 |
53 |
3.3e-5 |
PROSPERO |
CAP_GLY
|
60 |
125 |
1.05e-31 |
SMART |
internal_repeat_2
|
140 |
177 |
3.3e-5 |
PROSPERO |
CAP_GLY
|
213 |
278 |
4.69e-34 |
SMART |
low complexity region
|
286 |
304 |
N/A |
INTRINSIC |
low complexity region
|
305 |
331 |
N/A |
INTRINSIC |
coiled coil region
|
349 |
524 |
N/A |
INTRINSIC |
coiled coil region
|
570 |
609 |
N/A |
INTRINSIC |
coiled coil region
|
641 |
1075 |
N/A |
INTRINSIC |
coiled coil region
|
1115 |
1235 |
N/A |
INTRINSIC |
low complexity region
|
1245 |
1256 |
N/A |
INTRINSIC |
ZnF_C2HC
|
1300 |
1316 |
1.45e0 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000111561
AA Change: D640G
PolyPhen 2
Score 0.022 (Sensitivity: 0.95; Specificity: 0.81)
|
SMART Domains |
Protein: ENSMUSP00000107186 Gene: ENSMUSG00000049550 AA Change: D640G
Domain | Start | End | E-Value | Type |
internal_repeat_2
|
11 |
53 |
1.93e-5 |
PROSPERO |
CAP_GLY
|
60 |
125 |
1.05e-31 |
SMART |
internal_repeat_2
|
140 |
177 |
1.93e-5 |
PROSPERO |
CAP_GLY
|
213 |
278 |
4.69e-34 |
SMART |
low complexity region
|
286 |
304 |
N/A |
INTRINSIC |
low complexity region
|
305 |
331 |
N/A |
INTRINSIC |
coiled coil region
|
349 |
524 |
N/A |
INTRINSIC |
coiled coil region
|
570 |
609 |
N/A |
INTRINSIC |
coiled coil region
|
641 |
1341 |
N/A |
INTRINSIC |
low complexity region
|
1351 |
1362 |
N/A |
INTRINSIC |
ZnF_C2HC
|
1406 |
1422 |
1.45e0 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000111564
AA Change: D605G
PolyPhen 2
Score 0.048 (Sensitivity: 0.94; Specificity: 0.83)
|
SMART Domains |
Protein: ENSMUSP00000107190 Gene: ENSMUSG00000049550 AA Change: D605G
Domain | Start | End | E-Value | Type |
internal_repeat_2
|
11 |
53 |
2.5e-5 |
PROSPERO |
CAP_GLY
|
60 |
125 |
1.05e-31 |
SMART |
internal_repeat_2
|
140 |
177 |
2.5e-5 |
PROSPERO |
CAP_GLY
|
213 |
278 |
4.69e-34 |
SMART |
low complexity region
|
286 |
304 |
N/A |
INTRINSIC |
low complexity region
|
305 |
331 |
N/A |
INTRINSIC |
coiled coil region
|
349 |
489 |
N/A |
INTRINSIC |
coiled coil region
|
535 |
574 |
N/A |
INTRINSIC |
coiled coil region
|
606 |
1230 |
N/A |
INTRINSIC |
low complexity region
|
1240 |
1251 |
N/A |
INTRINSIC |
ZnF_C2HC
|
1295 |
1311 |
1.45e0 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000111566
AA Change: D605G
PolyPhen 2
Score 0.048 (Sensitivity: 0.94; Specificity: 0.83)
|
SMART Domains |
Protein: ENSMUSP00000107192 Gene: ENSMUSG00000049550 AA Change: D605G
Domain | Start | End | E-Value | Type |
internal_repeat_2
|
11 |
53 |
2e-5 |
PROSPERO |
CAP_GLY
|
60 |
125 |
1.05e-31 |
SMART |
internal_repeat_2
|
140 |
177 |
2e-5 |
PROSPERO |
CAP_GLY
|
213 |
278 |
4.69e-34 |
SMART |
low complexity region
|
286 |
304 |
N/A |
INTRINSIC |
low complexity region
|
305 |
331 |
N/A |
INTRINSIC |
coiled coil region
|
349 |
489 |
N/A |
INTRINSIC |
coiled coil region
|
535 |
574 |
N/A |
INTRINSIC |
coiled coil region
|
606 |
1306 |
N/A |
INTRINSIC |
low complexity region
|
1316 |
1327 |
N/A |
INTRINSIC |
ZnF_C2HC
|
1371 |
1387 |
1.45e0 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000122603
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000149410
AA Change: D574G
PolyPhen 2
Score 0.015 (Sensitivity: 0.96; Specificity: 0.79)
|
SMART Domains |
Protein: ENSMUSP00000115965 Gene: ENSMUSG00000049550 AA Change: D574G
Domain | Start | End | E-Value | Type |
low complexity region
|
26 |
32 |
N/A |
INTRINSIC |
CAP_GLY
|
60 |
125 |
1.05e-31 |
SMART |
CAP_GLY
|
213 |
278 |
4.69e-34 |
SMART |
low complexity region
|
286 |
304 |
N/A |
INTRINSIC |
low complexity region
|
305 |
331 |
N/A |
INTRINSIC |
coiled coil region
|
334 |
458 |
N/A |
INTRINSIC |
coiled coil region
|
504 |
543 |
N/A |
INTRINSIC |
coiled coil region
|
575 |
827 |
N/A |
INTRINSIC |
|
Predicted Effect |
unknown
Transcript: ENSMUST00000137363
AA Change: D392G
|
SMART Domains |
Protein: ENSMUSP00000121425 Gene: ENSMUSG00000049550 AA Change: D392G
Domain | Start | End | E-Value | Type |
CAP_GLY
|
2 |
31 |
2.59e0 |
SMART |
low complexity region
|
39 |
57 |
N/A |
INTRINSIC |
low complexity region
|
58 |
84 |
N/A |
INTRINSIC |
coiled coil region
|
101 |
276 |
N/A |
INTRINSIC |
coiled coil region
|
322 |
361 |
N/A |
INTRINSIC |
coiled coil region
|
393 |
980 |
N/A |
INTRINSIC |
low complexity region
|
991 |
1002 |
N/A |
INTRINSIC |
Pfam:CLIP1_ZNF
|
1004 |
1021 |
4.2e-9 |
PFAM |
ZnF_C2HC
|
1046 |
1062 |
1.45e0 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000199018
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000144121
|
SMART Domains |
Protein: ENSMUSP00000119641 Gene: ENSMUSG00000049550
Domain | Start | End | E-Value | Type |
CAP_GLY
|
37 |
102 |
1.05e-31 |
SMART |
|
Meta Mutation Damage Score |
0.0898 |
Coding Region Coverage |
- 1x: 99.4%
- 3x: 98.8%
- 10x: 97.3%
- 20x: 94.6%
|
Validation Efficiency |
100% (97/97) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene links endocytic vesicles to microtubules. This gene is highly expressed in Reed-Sternberg cells of Hodgkin disease. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011] PHENOTYPE: Mice homozygous for a targeted allele display reduced male fertility and teratozoospermia. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 93 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1700113H08Rik |
T |
C |
10: 87,000,931 (GRCm39) |
L41P |
probably damaging |
Het |
3110082I17Rik |
A |
G |
5: 139,349,875 (GRCm39) |
V58A |
possibly damaging |
Het |
4932415M13Rik |
A |
T |
17: 54,031,374 (GRCm39) |
|
noncoding transcript |
Het |
Aldh1a7 |
C |
T |
19: 20,679,607 (GRCm39) |
V390M |
probably damaging |
Het |
Alg14 |
A |
G |
3: 121,092,259 (GRCm39) |
H34R |
probably damaging |
Het |
Ankrd27 |
A |
G |
7: 35,307,772 (GRCm39) |
N337S |
probably damaging |
Het |
Apoa2 |
T |
A |
1: 171,052,948 (GRCm39) |
|
probably benign |
Het |
Arl2 |
T |
G |
19: 6,186,052 (GRCm39) |
K126T |
probably damaging |
Het |
Ascc3 |
T |
C |
10: 50,721,762 (GRCm39) |
W2072R |
probably benign |
Het |
Astl |
T |
C |
2: 127,184,339 (GRCm39) |
F21L |
probably benign |
Het |
Asxl3 |
A |
G |
18: 22,649,097 (GRCm39) |
D362G |
probably damaging |
Het |
Bdp1 |
A |
T |
13: 100,172,333 (GRCm39) |
H2094Q |
probably benign |
Het |
Cacna2d4 |
C |
T |
6: 119,284,247 (GRCm39) |
R745W |
probably damaging |
Het |
Ccdc85a |
T |
A |
11: 28,533,296 (GRCm39) |
I83F |
probably damaging |
Het |
Ccnt2 |
T |
A |
1: 127,730,131 (GRCm39) |
M336K |
probably benign |
Het |
Cd226 |
A |
C |
18: 89,225,144 (GRCm39) |
|
probably benign |
Het |
Ceacam23 |
C |
A |
7: 17,638,906 (GRCm39) |
A301E |
possibly damaging |
Het |
Ces1f |
A |
T |
8: 93,996,652 (GRCm39) |
S214T |
probably damaging |
Het |
Col26a1 |
A |
G |
5: 136,794,154 (GRCm39) |
|
probably null |
Het |
Crtc1 |
A |
G |
8: 70,845,663 (GRCm39) |
V306A |
probably benign |
Het |
D130043K22Rik |
G |
A |
13: 25,047,563 (GRCm39) |
|
probably benign |
Het |
D17H6S53E |
A |
T |
17: 35,346,385 (GRCm39) |
|
probably null |
Het |
Dnah11 |
G |
A |
12: 118,160,397 (GRCm39) |
A111V |
probably benign |
Het |
Dyrk2 |
T |
C |
10: 118,697,027 (GRCm39) |
H77R |
probably benign |
Het |
Epha3 |
A |
G |
16: 63,423,882 (GRCm39) |
|
probably benign |
Het |
Epn2 |
T |
C |
11: 61,410,317 (GRCm39) |
N611S |
probably benign |
Het |
Erich6 |
A |
C |
3: 58,526,365 (GRCm39) |
|
probably benign |
Het |
Fam217b |
T |
C |
2: 178,062,782 (GRCm39) |
S249P |
probably benign |
Het |
Fam219b |
A |
G |
9: 57,445,299 (GRCm39) |
|
probably benign |
Het |
Fryl |
A |
T |
5: 73,246,424 (GRCm39) |
|
probably benign |
Het |
Ftdc2 |
G |
A |
16: 58,455,886 (GRCm39) |
S129L |
probably damaging |
Het |
Gm14496 |
T |
C |
2: 181,638,059 (GRCm39) |
W378R |
probably damaging |
Het |
Gm57858 |
A |
G |
3: 36,074,362 (GRCm39) |
|
probably benign |
Het |
Gm8674 |
A |
T |
13: 50,058,611 (GRCm39) |
|
noncoding transcript |
Het |
Grap |
T |
A |
11: 61,551,065 (GRCm39) |
D32E |
possibly damaging |
Het |
Grk2 |
C |
A |
19: 4,339,385 (GRCm39) |
L428F |
probably damaging |
Het |
Grm8 |
T |
A |
6: 27,363,178 (GRCm39) |
E779V |
probably damaging |
Het |
Hipk1 |
A |
G |
3: 103,661,612 (GRCm39) |
S670P |
probably damaging |
Het |
Ilrun |
A |
T |
17: 28,005,112 (GRCm39) |
S148R |
probably damaging |
Het |
Itgae |
A |
T |
11: 73,020,032 (GRCm39) |
M845L |
probably benign |
Het |
Itih1 |
A |
T |
14: 30,663,512 (GRCm39) |
V164E |
probably damaging |
Het |
Itpka |
T |
A |
2: 119,581,312 (GRCm39) |
N448K |
probably damaging |
Het |
Jak3 |
A |
C |
8: 72,136,622 (GRCm39) |
N643T |
probably damaging |
Het |
Lrfn5 |
A |
C |
12: 61,886,454 (GRCm39) |
T81P |
probably damaging |
Het |
Lrrc45 |
T |
A |
11: 120,609,019 (GRCm39) |
|
probably null |
Het |
Marchf6 |
T |
C |
15: 31,480,437 (GRCm39) |
Y562C |
probably benign |
Het |
Mcrs1 |
T |
C |
15: 99,141,330 (GRCm39) |
|
probably benign |
Het |
Meis1 |
G |
A |
11: 18,831,767 (GRCm39) |
H424Y |
possibly damaging |
Het |
Mst1r |
A |
G |
9: 107,791,975 (GRCm39) |
N837S |
probably benign |
Het |
Mst1r |
G |
A |
9: 107,790,366 (GRCm39) |
V660I |
probably benign |
Het |
Mthfd2l |
T |
C |
5: 91,094,801 (GRCm39) |
V90A |
probably damaging |
Het |
Mtnr1a |
A |
T |
8: 45,540,974 (GRCm39) |
I312F |
probably benign |
Het |
Or10g3b |
T |
C |
14: 52,586,835 (GRCm39) |
I223V |
probably benign |
Het |
Or51g1 |
C |
A |
7: 102,634,043 (GRCm39) |
L109F |
possibly damaging |
Het |
Or8b12b |
T |
C |
9: 37,684,372 (GRCm39) |
V139A |
probably benign |
Het |
Otog |
C |
T |
7: 45,918,786 (GRCm39) |
T954I |
possibly damaging |
Het |
Pdcd6 |
A |
G |
13: 74,464,443 (GRCm39) |
|
probably benign |
Het |
Phlpp2 |
A |
G |
8: 110,663,738 (GRCm39) |
T926A |
probably damaging |
Het |
Plec |
GGCAGCAG |
GGCAGCAGCAG |
15: 76,066,107 (GRCm39) |
|
probably benign |
Het |
Plekha5 |
T |
A |
6: 140,535,360 (GRCm39) |
|
probably benign |
Het |
Ppp1r16a |
C |
T |
15: 76,577,869 (GRCm39) |
Q328* |
probably null |
Het |
Pramel18 |
G |
A |
4: 101,767,294 (GRCm39) |
C181Y |
probably damaging |
Het |
Pramel23 |
A |
T |
4: 143,425,056 (GRCm39) |
M129K |
probably benign |
Het |
Rab27b |
T |
C |
18: 70,120,112 (GRCm39) |
|
probably benign |
Het |
Rapsn |
T |
C |
2: 90,867,153 (GRCm39) |
Y152H |
probably damaging |
Het |
Rasd1 |
A |
T |
11: 59,855,379 (GRCm39) |
F85I |
probably damaging |
Het |
Rgs1 |
A |
T |
1: 144,123,671 (GRCm39) |
S85T |
probably damaging |
Het |
Samd9l |
T |
C |
6: 3,372,725 (GRCm39) |
E1512G |
possibly damaging |
Het |
Sgsm1 |
C |
T |
5: 113,427,050 (GRCm39) |
A127T |
probably benign |
Het |
Shc1 |
A |
G |
3: 89,330,276 (GRCm39) |
D70G |
probably damaging |
Het |
Slc26a1 |
T |
A |
5: 108,821,389 (GRCm39) |
T167S |
probably benign |
Het |
Slc26a7 |
A |
T |
4: 14,593,873 (GRCm39) |
Y81N |
probably damaging |
Het |
Slc2a12 |
T |
C |
10: 22,577,915 (GRCm39) |
|
probably benign |
Het |
Slc30a7 |
T |
A |
3: 115,783,789 (GRCm39) |
|
probably null |
Het |
Slc44a5 |
T |
C |
3: 153,971,111 (GRCm39) |
S654P |
probably damaging |
Het |
Stard9 |
T |
G |
2: 120,527,480 (GRCm39) |
S1246A |
possibly damaging |
Het |
Stxbp5 |
A |
T |
10: 9,740,843 (GRCm39) |
S116R |
probably damaging |
Het |
Syvn1 |
C |
T |
19: 6,102,483 (GRCm39) |
P517L |
probably benign |
Het |
Tas2r105 |
T |
C |
6: 131,664,393 (GRCm39) |
I12V |
probably benign |
Het |
Tas2r121 |
A |
G |
6: 132,677,325 (GRCm39) |
S216P |
probably damaging |
Het |
Tcof1 |
T |
C |
18: 60,978,904 (GRCm39) |
D48G |
probably damaging |
Het |
Tgm3 |
C |
T |
2: 129,868,602 (GRCm39) |
|
probably benign |
Het |
Tle2 |
T |
C |
10: 81,424,781 (GRCm39) |
F667L |
probably damaging |
Het |
Tnfaip3 |
C |
A |
10: 18,878,697 (GRCm39) |
A704S |
probably benign |
Het |
Trabd2b |
A |
G |
4: 114,437,519 (GRCm39) |
Q232R |
probably benign |
Het |
Ttc28 |
T |
A |
5: 111,378,947 (GRCm39) |
I1144N |
probably damaging |
Het |
Ucp3 |
T |
A |
7: 100,128,748 (GRCm39) |
C25* |
probably null |
Het |
Ugt3a1 |
A |
G |
15: 9,370,236 (GRCm39) |
D460G |
probably damaging |
Het |
Urb1 |
T |
C |
16: 90,592,336 (GRCm39) |
D308G |
possibly damaging |
Het |
Ush1g |
G |
T |
11: 115,209,694 (GRCm39) |
R167S |
possibly damaging |
Het |
Vav3 |
A |
G |
3: 109,554,995 (GRCm39) |
N81S |
possibly damaging |
Het |
Vmn2r108 |
A |
T |
17: 20,691,721 (GRCm39) |
D267E |
probably benign |
Het |
Zng1 |
A |
G |
19: 24,918,203 (GRCm39) |
|
probably benign |
Het |
|
Other mutations in Clip1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00159:Clip1
|
APN |
5 |
123,741,717 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL01067:Clip1
|
APN |
5 |
123,768,867 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01524:Clip1
|
APN |
5 |
123,717,442 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01632:Clip1
|
APN |
5 |
123,755,559 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01798:Clip1
|
APN |
5 |
123,721,612 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01874:Clip1
|
APN |
5 |
123,741,729 (GRCm39) |
missense |
possibly damaging |
0.50 |
IGL01908:Clip1
|
APN |
5 |
123,761,270 (GRCm39) |
splice site |
probably benign |
|
IGL02120:Clip1
|
APN |
5 |
123,785,946 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02309:Clip1
|
APN |
5 |
123,755,763 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02555:Clip1
|
APN |
5 |
123,759,857 (GRCm39) |
critical splice donor site |
probably null |
|
IGL03027:Clip1
|
APN |
5 |
123,759,919 (GRCm39) |
missense |
probably benign |
0.43 |
IGL03336:Clip1
|
APN |
5 |
123,791,633 (GRCm39) |
nonsense |
probably null |
|
IGL03365:Clip1
|
APN |
5 |
123,721,649 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02802:Clip1
|
UTSW |
5 |
123,769,186 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4812001:Clip1
|
UTSW |
5 |
123,768,738 (GRCm39) |
missense |
probably benign |
0.08 |
R0254:Clip1
|
UTSW |
5 |
123,755,395 (GRCm39) |
splice site |
probably benign |
|
R0401:Clip1
|
UTSW |
5 |
123,791,852 (GRCm39) |
missense |
probably damaging |
1.00 |
R0530:Clip1
|
UTSW |
5 |
123,778,594 (GRCm39) |
missense |
probably damaging |
1.00 |
R0744:Clip1
|
UTSW |
5 |
123,768,784 (GRCm39) |
missense |
probably benign |
0.05 |
R1116:Clip1
|
UTSW |
5 |
123,717,554 (GRCm39) |
missense |
probably damaging |
0.99 |
R1182:Clip1
|
UTSW |
5 |
123,785,928 (GRCm39) |
missense |
probably damaging |
1.00 |
R1656:Clip1
|
UTSW |
5 |
123,768,466 (GRCm39) |
missense |
possibly damaging |
0.61 |
R1700:Clip1
|
UTSW |
5 |
123,768,433 (GRCm39) |
missense |
probably benign |
|
R1889:Clip1
|
UTSW |
5 |
123,791,559 (GRCm39) |
missense |
probably damaging |
0.99 |
R1975:Clip1
|
UTSW |
5 |
123,761,281 (GRCm39) |
missense |
possibly damaging |
0.79 |
R2406:Clip1
|
UTSW |
5 |
123,741,723 (GRCm39) |
missense |
probably damaging |
1.00 |
R3545:Clip1
|
UTSW |
5 |
123,769,141 (GRCm39) |
missense |
probably damaging |
1.00 |
R3547:Clip1
|
UTSW |
5 |
123,769,141 (GRCm39) |
missense |
probably damaging |
1.00 |
R3548:Clip1
|
UTSW |
5 |
123,769,141 (GRCm39) |
missense |
probably damaging |
1.00 |
R3911:Clip1
|
UTSW |
5 |
123,728,897 (GRCm39) |
missense |
probably damaging |
1.00 |
R3944:Clip1
|
UTSW |
5 |
123,755,892 (GRCm39) |
unclassified |
probably benign |
|
R4660:Clip1
|
UTSW |
5 |
123,717,437 (GRCm39) |
missense |
probably damaging |
0.98 |
R4784:Clip1
|
UTSW |
5 |
123,717,356 (GRCm39) |
missense |
probably damaging |
1.00 |
R4785:Clip1
|
UTSW |
5 |
123,717,356 (GRCm39) |
missense |
probably damaging |
1.00 |
R4824:Clip1
|
UTSW |
5 |
123,769,086 (GRCm39) |
missense |
probably damaging |
1.00 |
R4831:Clip1
|
UTSW |
5 |
123,721,664 (GRCm39) |
missense |
probably damaging |
1.00 |
R4951:Clip1
|
UTSW |
5 |
123,768,408 (GRCm39) |
missense |
probably benign |
0.02 |
R4960:Clip1
|
UTSW |
5 |
123,792,066 (GRCm39) |
nonsense |
probably null |
|
R5014:Clip1
|
UTSW |
5 |
123,755,793 (GRCm39) |
missense |
probably damaging |
0.99 |
R5116:Clip1
|
UTSW |
5 |
123,768,770 (GRCm39) |
missense |
probably benign |
0.05 |
R5212:Clip1
|
UTSW |
5 |
123,768,744 (GRCm39) |
missense |
probably benign |
0.09 |
R5238:Clip1
|
UTSW |
5 |
123,785,946 (GRCm39) |
missense |
probably damaging |
1.00 |
R5318:Clip1
|
UTSW |
5 |
123,751,147 (GRCm39) |
unclassified |
probably benign |
|
R5372:Clip1
|
UTSW |
5 |
123,768,303 (GRCm39) |
missense |
probably benign |
0.02 |
R5701:Clip1
|
UTSW |
5 |
123,751,366 (GRCm39) |
unclassified |
probably benign |
|
R5734:Clip1
|
UTSW |
5 |
123,753,217 (GRCm39) |
unclassified |
probably benign |
|
R5757:Clip1
|
UTSW |
5 |
123,765,460 (GRCm39) |
missense |
probably benign |
0.21 |
R6024:Clip1
|
UTSW |
5 |
123,753,152 (GRCm39) |
missense |
possibly damaging |
0.66 |
R6160:Clip1
|
UTSW |
5 |
123,751,604 (GRCm39) |
missense |
possibly damaging |
0.66 |
R6177:Clip1
|
UTSW |
5 |
123,751,897 (GRCm39) |
unclassified |
probably benign |
|
R6183:Clip1
|
UTSW |
5 |
123,780,667 (GRCm39) |
missense |
probably damaging |
1.00 |
R6377:Clip1
|
UTSW |
5 |
123,741,717 (GRCm39) |
missense |
possibly damaging |
0.50 |
R6436:Clip1
|
UTSW |
5 |
123,779,848 (GRCm39) |
missense |
probably damaging |
1.00 |
R6471:Clip1
|
UTSW |
5 |
123,778,612 (GRCm39) |
missense |
probably damaging |
0.99 |
R6766:Clip1
|
UTSW |
5 |
123,752,827 (GRCm39) |
unclassified |
probably benign |
|
R7015:Clip1
|
UTSW |
5 |
123,751,675 (GRCm39) |
unclassified |
probably benign |
|
R7094:Clip1
|
UTSW |
5 |
123,761,333 (GRCm39) |
missense |
probably benign |
0.02 |
R7143:Clip1
|
UTSW |
5 |
123,791,673 (GRCm39) |
missense |
probably benign |
|
R7222:Clip1
|
UTSW |
5 |
123,749,904 (GRCm39) |
missense |
probably damaging |
0.99 |
R7233:Clip1
|
UTSW |
5 |
123,749,922 (GRCm39) |
missense |
probably damaging |
1.00 |
R7238:Clip1
|
UTSW |
5 |
123,751,328 (GRCm39) |
missense |
|
|
R7249:Clip1
|
UTSW |
5 |
123,741,663 (GRCm39) |
missense |
probably damaging |
1.00 |
R7283:Clip1
|
UTSW |
5 |
123,751,857 (GRCm39) |
missense |
|
|
R7295:Clip1
|
UTSW |
5 |
123,765,419 (GRCm39) |
missense |
probably benign |
0.19 |
R7447:Clip1
|
UTSW |
5 |
123,791,696 (GRCm39) |
missense |
probably benign |
0.03 |
R7458:Clip1
|
UTSW |
5 |
123,778,609 (GRCm39) |
missense |
probably damaging |
1.00 |
R7483:Clip1
|
UTSW |
5 |
123,755,447 (GRCm39) |
missense |
probably benign |
0.00 |
R7516:Clip1
|
UTSW |
5 |
123,721,448 (GRCm39) |
missense |
probably benign |
0.00 |
R7619:Clip1
|
UTSW |
5 |
123,752,342 (GRCm39) |
missense |
|
|
R7831:Clip1
|
UTSW |
5 |
123,751,342 (GRCm39) |
missense |
|
|
R7897:Clip1
|
UTSW |
5 |
123,760,861 (GRCm39) |
missense |
probably benign |
|
R8155:Clip1
|
UTSW |
5 |
123,751,699 (GRCm39) |
missense |
|
|
R8157:Clip1
|
UTSW |
5 |
123,768,782 (GRCm39) |
missense |
probably benign |
0.17 |
R8232:Clip1
|
UTSW |
5 |
123,785,981 (GRCm39) |
missense |
probably benign |
0.05 |
R8396:Clip1
|
UTSW |
5 |
123,780,627 (GRCm39) |
missense |
probably damaging |
1.00 |
R8446:Clip1
|
UTSW |
5 |
123,794,008 (GRCm39) |
missense |
probably damaging |
1.00 |
R8486:Clip1
|
UTSW |
5 |
123,752,770 (GRCm39) |
unclassified |
probably benign |
|
R8511:Clip1
|
UTSW |
5 |
123,791,969 (GRCm39) |
missense |
possibly damaging |
0.50 |
R8731:Clip1
|
UTSW |
5 |
123,752,756 (GRCm39) |
missense |
|
|
R8889:Clip1
|
UTSW |
5 |
123,717,565 (GRCm39) |
missense |
probably benign |
0.00 |
R8892:Clip1
|
UTSW |
5 |
123,717,565 (GRCm39) |
missense |
probably benign |
0.00 |
R9058:Clip1
|
UTSW |
5 |
123,752,645 (GRCm39) |
missense |
|
|
R9106:Clip1
|
UTSW |
5 |
123,753,223 (GRCm39) |
missense |
probably damaging |
0.97 |
R9212:Clip1
|
UTSW |
5 |
123,721,399 (GRCm39) |
missense |
probably damaging |
1.00 |
R9217:Clip1
|
UTSW |
5 |
123,717,441 (GRCm39) |
missense |
probably damaging |
1.00 |
R9223:Clip1
|
UTSW |
5 |
123,784,337 (GRCm39) |
missense |
probably damaging |
1.00 |
R9325:Clip1
|
UTSW |
5 |
123,751,186 (GRCm39) |
missense |
|
|
R9752:Clip1
|
UTSW |
5 |
123,760,009 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Clip1
|
UTSW |
5 |
123,755,413 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Predicted Primers |
PCR Primer
(F):5'- GCTTTCCGAAGCGCATCAAGATCC -3'
(R):5'- GCTTTCCAAAGAGAACGAGTCCCTG -3'
Sequencing Primer
(F):5'- TTTGACAGCACTGAGCTGC -3'
(R):5'- GTCCCTGAGAAGCAAGCTC -3'
|
Posted On |
2013-10-16 |