Incidental Mutation 'R0827:Cntn5'
ID |
78322 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Cntn5
|
Ensembl Gene |
ENSMUSG00000039488 |
Gene Name |
contactin 5 |
Synonyms |
A830025P08Rik, 6720426O10Rik, NB-2, LOC244683 |
MMRRC Submission |
039007-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R0827 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
9 |
Chromosomal Location |
9660896-10904780 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 9666943 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Alanine
at position 1032
(V1032A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000073769
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000074133]
[ENSMUST00000160216]
[ENSMUST00000162484]
[ENSMUST00000179049]
|
AlphaFold |
P68500 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000074133
AA Change: V1032A
PolyPhen 2
Score 0.880 (Sensitivity: 0.82; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000073769 Gene: ENSMUSG00000039488 AA Change: V1032A
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
IGc2
|
113 |
179 |
1.11e-10 |
SMART |
IG
|
201 |
289 |
4.82e-6 |
SMART |
IGc2
|
312 |
375 |
1.4e-16 |
SMART |
IGc2
|
401 |
464 |
8.97e-15 |
SMART |
IGc2
|
493 |
557 |
4.96e-8 |
SMART |
IG
|
577 |
667 |
2.13e-7 |
SMART |
FN3
|
670 |
756 |
1.01e-11 |
SMART |
FN3
|
773 |
859 |
9.19e-1 |
SMART |
FN3
|
875 |
958 |
3.99e-10 |
SMART |
FN3
|
974 |
1053 |
1.68e-3 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000160216
AA Change: V1032A
PolyPhen 2
Score 0.427 (Sensitivity: 0.89; Specificity: 0.90)
|
SMART Domains |
Protein: ENSMUSP00000124327 Gene: ENSMUSG00000039488 AA Change: V1032A
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
IGc2
|
113 |
179 |
1.11e-10 |
SMART |
IG
|
201 |
289 |
4.82e-6 |
SMART |
IGc2
|
312 |
375 |
1.4e-16 |
SMART |
IGc2
|
401 |
464 |
8.97e-15 |
SMART |
IGc2
|
493 |
557 |
4.96e-8 |
SMART |
IG
|
577 |
667 |
2.13e-7 |
SMART |
FN3
|
670 |
756 |
1.01e-11 |
SMART |
FN3
|
773 |
859 |
9.19e-1 |
SMART |
FN3
|
875 |
958 |
3.99e-10 |
SMART |
FN3
|
974 |
1053 |
1.68e-3 |
SMART |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000162484
AA Change: V827A
PolyPhen 2
Score 0.775 (Sensitivity: 0.85; Specificity: 0.92)
|
SMART Domains |
Protein: ENSMUSP00000124214 Gene: ENSMUSG00000039488 AA Change: V827A
Domain | Start | End | E-Value | Type |
IG_like
|
10 |
84 |
1.12e2 |
SMART |
IGc2
|
107 |
170 |
1.4e-16 |
SMART |
IGc2
|
196 |
259 |
8.97e-15 |
SMART |
IGc2
|
288 |
352 |
4.96e-8 |
SMART |
IG
|
372 |
462 |
2.13e-7 |
SMART |
FN3
|
465 |
551 |
1.01e-11 |
SMART |
FN3
|
568 |
654 |
9.19e-1 |
SMART |
FN3
|
670 |
753 |
3.99e-10 |
SMART |
FN3
|
769 |
848 |
1.68e-3 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000175035
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000179049
AA Change: V827A
PolyPhen 2
Score 0.775 (Sensitivity: 0.85; Specificity: 0.92)
|
SMART Domains |
Protein: ENSMUSP00000135903 Gene: ENSMUSG00000039488 AA Change: V827A
Domain | Start | End | E-Value | Type |
IG_like
|
10 |
84 |
1.12e2 |
SMART |
IGc2
|
107 |
170 |
1.4e-16 |
SMART |
IGc2
|
196 |
259 |
8.97e-15 |
SMART |
IGc2
|
288 |
352 |
4.96e-8 |
SMART |
IG
|
372 |
462 |
2.13e-7 |
SMART |
FN3
|
465 |
551 |
1.01e-11 |
SMART |
FN3
|
568 |
654 |
9.19e-1 |
SMART |
FN3
|
670 |
753 |
3.99e-10 |
SMART |
FN3
|
769 |
848 |
1.68e-3 |
SMART |
|
Meta Mutation Damage Score |
0.1059 |
Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.7%
- 10x: 97.1%
- 20x: 93.6%
|
Validation Efficiency |
100% (88/88) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a member of the immunoglobulin superfamily, and contactin family, which mediate cell surface interactions during nervous system development. This protein is a glycosylphosphatidylinositol (GPI)-anchored neuronal membrane protein that functions as a cell adhesion molecule. It may play a role in the formation of axon connections in the developing nervous system. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Aug 2011] PHENOTYPE: Homozygous null mice are viable, fertile, and less susceptible to audiogenic seizures. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 86 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Acan |
T |
C |
7: 78,749,419 (GRCm39) |
S1397P |
probably benign |
Het |
Adamts15 |
T |
C |
9: 30,832,776 (GRCm39) |
Y253C |
probably damaging |
Het |
Ankk1 |
A |
G |
9: 49,333,037 (GRCm39) |
I149T |
possibly damaging |
Het |
Ankrd63 |
A |
G |
2: 118,533,034 (GRCm39) |
S296P |
possibly damaging |
Het |
Arpc1b |
T |
G |
5: 145,062,566 (GRCm39) |
C227G |
probably benign |
Het |
B4gat1 |
A |
G |
19: 5,089,725 (GRCm39) |
R241G |
possibly damaging |
Het |
Ccar2 |
T |
C |
14: 70,377,287 (GRCm39) |
N751D |
probably benign |
Het |
Cd55b |
T |
C |
1: 130,341,973 (GRCm39) |
I221M |
probably damaging |
Het |
Col11a1 |
G |
A |
3: 113,932,414 (GRCm39) |
R113H |
unknown |
Het |
Colec10 |
G |
A |
15: 54,325,980 (GRCm39) |
C270Y |
probably damaging |
Het |
Ctnnbl1 |
C |
T |
2: 157,641,337 (GRCm39) |
|
probably benign |
Het |
Cyp2j12 |
T |
G |
4: 96,001,099 (GRCm39) |
|
probably benign |
Het |
Dennd5a |
G |
A |
7: 109,498,938 (GRCm39) |
T999M |
probably damaging |
Het |
Dusp13b |
C |
A |
14: 21,792,839 (GRCm39) |
V29L |
probably benign |
Het |
Efr3a |
A |
C |
15: 65,725,400 (GRCm39) |
D83A |
possibly damaging |
Het |
Elmod2 |
A |
G |
8: 84,043,424 (GRCm39) |
|
probably null |
Het |
Eml3 |
C |
A |
19: 8,915,830 (GRCm39) |
T640K |
probably damaging |
Het |
Eps8l1 |
T |
C |
7: 4,480,388 (GRCm39) |
V543A |
possibly damaging |
Het |
Ermn |
T |
C |
2: 57,938,263 (GRCm39) |
K117E |
probably damaging |
Het |
F830045P16Rik |
A |
G |
2: 129,314,696 (GRCm39) |
S194P |
probably benign |
Het |
Faim2 |
A |
G |
15: 99,422,617 (GRCm39) |
V60A |
probably benign |
Het |
Fancd2 |
G |
A |
6: 113,563,210 (GRCm39) |
|
probably null |
Het |
Fbxo43 |
A |
T |
15: 36,163,115 (GRCm39) |
S31T |
possibly damaging |
Het |
Gab2 |
G |
A |
7: 96,949,539 (GRCm39) |
R411Q |
probably damaging |
Het |
Gpm6a |
A |
T |
8: 55,511,918 (GRCm39) |
D264V |
probably damaging |
Het |
H1f6 |
A |
G |
13: 23,880,204 (GRCm39) |
D119G |
probably benign |
Het |
Hsp90aa1 |
T |
C |
12: 110,659,129 (GRCm39) |
E556G |
probably benign |
Het |
Ifi203 |
A |
T |
1: 173,756,029 (GRCm39) |
|
probably benign |
Het |
Iqca1 |
C |
A |
1: 90,070,453 (GRCm39) |
G133V |
probably null |
Het |
Kcnc3 |
A |
G |
7: 44,244,630 (GRCm39) |
T307A |
probably damaging |
Het |
Kin |
C |
A |
2: 10,095,187 (GRCm39) |
|
probably benign |
Het |
Knl1 |
T |
C |
2: 118,919,382 (GRCm39) |
|
probably benign |
Het |
Lrp4 |
G |
A |
2: 91,325,386 (GRCm39) |
V1404M |
probably damaging |
Het |
Lrrc71 |
T |
A |
3: 87,649,952 (GRCm39) |
|
probably null |
Het |
Med13l |
T |
C |
5: 118,864,312 (GRCm39) |
|
probably benign |
Het |
Mfap5 |
A |
G |
6: 122,497,879 (GRCm39) |
D39G |
probably damaging |
Het |
Mlxipl |
T |
C |
5: 135,161,592 (GRCm39) |
S504P |
probably benign |
Het |
Myo3a |
T |
G |
2: 22,448,227 (GRCm39) |
Y1D |
probably damaging |
Het |
Nek1 |
A |
G |
8: 61,558,682 (GRCm39) |
|
probably benign |
Het |
Nfkbiz |
T |
C |
16: 55,636,730 (GRCm39) |
R524G |
probably damaging |
Het |
Npbwr1 |
T |
C |
1: 5,987,008 (GRCm39) |
T169A |
possibly damaging |
Het |
Nuggc |
T |
C |
14: 65,846,340 (GRCm39) |
Y84H |
probably damaging |
Het |
Nxph3 |
G |
A |
11: 95,402,252 (GRCm39) |
S54L |
probably benign |
Het |
Or13a21 |
A |
G |
7: 139,999,380 (GRCm39) |
F102S |
probably damaging |
Het |
Or9e1 |
T |
C |
11: 58,732,597 (GRCm39) |
I219T |
probably damaging |
Het |
Ostn |
A |
G |
16: 27,143,381 (GRCm39) |
N70D |
probably damaging |
Het |
Pate7 |
A |
T |
9: 35,689,147 (GRCm39) |
L12Q |
probably damaging |
Het |
Pcdhb2 |
G |
A |
18: 37,428,710 (GRCm39) |
V228I |
possibly damaging |
Het |
Pnpla6 |
A |
T |
8: 3,567,618 (GRCm39) |
M109L |
possibly damaging |
Het |
Ppil6 |
T |
A |
10: 41,370,500 (GRCm39) |
|
probably benign |
Het |
Prss46 |
A |
G |
9: 110,680,500 (GRCm39) |
N215S |
probably benign |
Het |
Ptprd |
A |
T |
4: 76,047,152 (GRCm39) |
D371E |
probably damaging |
Het |
Ripor2 |
T |
A |
13: 24,878,169 (GRCm39) |
F315I |
probably damaging |
Het |
Rmi2 |
G |
A |
16: 10,653,104 (GRCm39) |
G51S |
probably damaging |
Het |
Scg3 |
A |
G |
9: 75,590,979 (GRCm39) |
I10T |
possibly damaging |
Het |
Scn9a |
T |
A |
2: 66,366,468 (GRCm39) |
K761* |
probably null |
Het |
Scyl2 |
A |
G |
10: 89,493,727 (GRCm39) |
L347P |
possibly damaging |
Het |
Sh3d21 |
A |
G |
4: 126,046,064 (GRCm39) |
|
probably benign |
Het |
Shc1 |
T |
A |
3: 89,334,090 (GRCm39) |
|
probably null |
Het |
Slbp |
A |
G |
5: 33,801,166 (GRCm39) |
S182P |
probably damaging |
Het |
Slc24a1 |
C |
T |
9: 64,835,472 (GRCm39) |
G885D |
probably benign |
Het |
Slc24a3 |
T |
C |
2: 145,360,412 (GRCm39) |
|
probably benign |
Het |
Sowahb |
T |
G |
5: 93,191,145 (GRCm39) |
N525H |
probably damaging |
Het |
Sppl3 |
T |
A |
5: 115,220,392 (GRCm39) |
C101* |
probably null |
Het |
Srsf5 |
A |
G |
12: 80,996,314 (GRCm39) |
K163E |
probably damaging |
Het |
Sult2a4 |
A |
G |
7: 13,718,886 (GRCm39) |
I119T |
probably benign |
Het |
Svep1 |
A |
G |
4: 58,053,113 (GRCm39) |
|
probably benign |
Het |
Tas1r3 |
G |
A |
4: 155,945,326 (GRCm39) |
R632W |
probably benign |
Het |
Tlr4 |
T |
A |
4: 66,752,117 (GRCm39) |
|
probably null |
Het |
Tmf1 |
A |
C |
6: 97,135,011 (GRCm39) |
L1001* |
probably null |
Het |
Tnnt2 |
A |
G |
1: 135,771,534 (GRCm39) |
|
probably benign |
Het |
Trank1 |
G |
A |
9: 111,178,485 (GRCm39) |
|
probably benign |
Het |
Trdn |
A |
T |
10: 33,275,154 (GRCm39) |
|
probably benign |
Het |
Trmt6 |
A |
T |
2: 132,657,754 (GRCm39) |
V34E |
probably damaging |
Het |
Trrap |
T |
C |
5: 144,751,640 (GRCm39) |
F1699L |
probably benign |
Het |
Ttk |
A |
G |
9: 83,725,968 (GRCm39) |
R250G |
probably benign |
Het |
Ttn |
T |
A |
2: 76,640,248 (GRCm39) |
I13787F |
probably damaging |
Het |
Uggt1 |
T |
A |
1: 36,195,394 (GRCm39) |
|
probably null |
Het |
Ugt2b35 |
T |
A |
5: 87,155,989 (GRCm39) |
|
probably benign |
Het |
Ugt2b36 |
C |
A |
5: 87,214,234 (GRCm39) |
R470L |
possibly damaging |
Het |
Unk |
A |
G |
11: 115,943,935 (GRCm39) |
D352G |
possibly damaging |
Het |
Vmn2r77 |
G |
T |
7: 86,451,224 (GRCm39) |
C370F |
probably damaging |
Het |
Vmn2r85 |
A |
G |
10: 130,265,387 (GRCm39) |
I32T |
possibly damaging |
Het |
Zfp637 |
A |
G |
6: 117,822,405 (GRCm39) |
I178V |
possibly damaging |
Het |
Zfp943 |
A |
G |
17: 22,211,071 (GRCm39) |
|
probably null |
Het |
Zyg11a |
A |
G |
4: 108,067,239 (GRCm39) |
|
probably benign |
Het |
|
Other mutations in Cntn5 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00742:Cntn5
|
APN |
9 |
9,976,302 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01118:Cntn5
|
APN |
9 |
9,831,565 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL01328:Cntn5
|
APN |
9 |
9,781,773 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01445:Cntn5
|
APN |
9 |
9,693,489 (GRCm39) |
splice site |
probably benign |
|
IGL01505:Cntn5
|
APN |
9 |
9,706,092 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01556:Cntn5
|
APN |
9 |
9,673,913 (GRCm39) |
missense |
probably benign |
|
IGL01804:Cntn5
|
APN |
9 |
9,831,542 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02173:Cntn5
|
APN |
9 |
9,748,401 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02250:Cntn5
|
APN |
9 |
10,145,336 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02366:Cntn5
|
APN |
9 |
9,984,060 (GRCm39) |
splice site |
probably benign |
|
IGL02565:Cntn5
|
APN |
9 |
10,145,343 (GRCm39) |
nonsense |
probably null |
|
IGL02593:Cntn5
|
APN |
9 |
9,833,504 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02743:Cntn5
|
APN |
9 |
9,984,115 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02976:Cntn5
|
APN |
9 |
10,419,104 (GRCm39) |
unclassified |
probably benign |
|
IGL03103:Cntn5
|
APN |
9 |
9,972,817 (GRCm39) |
splice site |
probably benign |
|
IGL03114:Cntn5
|
APN |
9 |
9,748,457 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03156:Cntn5
|
APN |
9 |
9,673,882 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02802:Cntn5
|
UTSW |
9 |
10,048,683 (GRCm39) |
splice site |
probably null |
|
R0243:Cntn5
|
UTSW |
9 |
9,781,780 (GRCm39) |
missense |
probably damaging |
1.00 |
R0385:Cntn5
|
UTSW |
9 |
9,972,875 (GRCm39) |
missense |
probably damaging |
1.00 |
R0541:Cntn5
|
UTSW |
9 |
9,673,407 (GRCm39) |
splice site |
probably benign |
|
R1029:Cntn5
|
UTSW |
9 |
9,831,577 (GRCm39) |
missense |
probably damaging |
1.00 |
R1440:Cntn5
|
UTSW |
9 |
10,145,344 (GRCm39) |
missense |
probably damaging |
1.00 |
R1463:Cntn5
|
UTSW |
9 |
9,673,801 (GRCm39) |
critical splice donor site |
probably null |
|
R1536:Cntn5
|
UTSW |
9 |
9,976,321 (GRCm39) |
missense |
possibly damaging |
0.78 |
R1746:Cntn5
|
UTSW |
9 |
9,831,577 (GRCm39) |
missense |
probably damaging |
1.00 |
R1761:Cntn5
|
UTSW |
9 |
10,172,059 (GRCm39) |
missense |
probably benign |
0.01 |
R1764:Cntn5
|
UTSW |
9 |
9,673,988 (GRCm39) |
missense |
probably benign |
|
R1859:Cntn5
|
UTSW |
9 |
9,972,839 (GRCm39) |
missense |
probably damaging |
1.00 |
R1888:Cntn5
|
UTSW |
9 |
9,984,082 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1888:Cntn5
|
UTSW |
9 |
9,984,082 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1950:Cntn5
|
UTSW |
9 |
9,781,774 (GRCm39) |
missense |
probably damaging |
1.00 |
R2143:Cntn5
|
UTSW |
9 |
9,748,420 (GRCm39) |
missense |
probably damaging |
0.98 |
R2145:Cntn5
|
UTSW |
9 |
9,748,420 (GRCm39) |
missense |
probably damaging |
0.98 |
R2437:Cntn5
|
UTSW |
9 |
10,048,758 (GRCm39) |
nonsense |
probably null |
|
R2440:Cntn5
|
UTSW |
9 |
10,171,960 (GRCm39) |
missense |
possibly damaging |
0.91 |
R2504:Cntn5
|
UTSW |
9 |
10,172,126 (GRCm39) |
missense |
probably benign |
|
R3054:Cntn5
|
UTSW |
9 |
10,419,076 (GRCm39) |
missense |
probably benign |
0.30 |
R3056:Cntn5
|
UTSW |
9 |
10,419,076 (GRCm39) |
missense |
probably benign |
0.30 |
R3804:Cntn5
|
UTSW |
9 |
9,781,668 (GRCm39) |
splice site |
probably benign |
|
R4164:Cntn5
|
UTSW |
9 |
9,781,681 (GRCm39) |
missense |
probably damaging |
1.00 |
R4444:Cntn5
|
UTSW |
9 |
9,704,947 (GRCm39) |
missense |
probably damaging |
1.00 |
R4472:Cntn5
|
UTSW |
9 |
10,048,776 (GRCm39) |
missense |
probably damaging |
1.00 |
R4576:Cntn5
|
UTSW |
9 |
9,673,297 (GRCm39) |
missense |
probably benign |
0.10 |
R4624:Cntn5
|
UTSW |
9 |
9,704,809 (GRCm39) |
nonsense |
probably null |
|
R4652:Cntn5
|
UTSW |
9 |
9,704,917 (GRCm39) |
missense |
possibly damaging |
0.68 |
R4664:Cntn5
|
UTSW |
9 |
10,144,214 (GRCm39) |
missense |
possibly damaging |
0.71 |
R4679:Cntn5
|
UTSW |
9 |
9,970,536 (GRCm39) |
missense |
probably benign |
0.09 |
R4829:Cntn5
|
UTSW |
9 |
9,976,288 (GRCm39) |
missense |
probably damaging |
1.00 |
R4929:Cntn5
|
UTSW |
9 |
9,976,400 (GRCm39) |
critical splice acceptor site |
probably null |
|
R5211:Cntn5
|
UTSW |
9 |
9,704,894 (GRCm39) |
missense |
possibly damaging |
0.88 |
R5406:Cntn5
|
UTSW |
9 |
9,833,465 (GRCm39) |
missense |
probably damaging |
1.00 |
R5468:Cntn5
|
UTSW |
9 |
9,743,633 (GRCm39) |
missense |
probably damaging |
1.00 |
R5584:Cntn5
|
UTSW |
9 |
9,661,457 (GRCm39) |
missense |
possibly damaging |
0.91 |
R5688:Cntn5
|
UTSW |
9 |
9,748,427 (GRCm39) |
missense |
probably damaging |
1.00 |
R5762:Cntn5
|
UTSW |
9 |
9,748,394 (GRCm39) |
missense |
possibly damaging |
0.95 |
R6141:Cntn5
|
UTSW |
9 |
10,144,162 (GRCm39) |
missense |
probably benign |
|
R6147:Cntn5
|
UTSW |
9 |
10,012,894 (GRCm39) |
missense |
probably damaging |
0.98 |
R6325:Cntn5
|
UTSW |
9 |
10,144,328 (GRCm39) |
splice site |
probably null |
|
R6377:Cntn5
|
UTSW |
9 |
9,743,657 (GRCm39) |
missense |
probably damaging |
1.00 |
R6774:Cntn5
|
UTSW |
9 |
10,144,222 (GRCm39) |
missense |
probably damaging |
1.00 |
R7117:Cntn5
|
UTSW |
9 |
10,904,704 (GRCm39) |
start gained |
probably benign |
|
R7252:Cntn5
|
UTSW |
9 |
9,831,640 (GRCm39) |
missense |
probably benign |
0.00 |
R7363:Cntn5
|
UTSW |
9 |
10,172,021 (GRCm39) |
missense |
probably benign |
0.00 |
R7401:Cntn5
|
UTSW |
9 |
9,833,466 (GRCm39) |
missense |
probably benign |
0.13 |
R7488:Cntn5
|
UTSW |
9 |
9,970,570 (GRCm39) |
missense |
probably damaging |
0.99 |
R7548:Cntn5
|
UTSW |
9 |
9,673,415 (GRCm39) |
splice site |
probably null |
|
R7662:Cntn5
|
UTSW |
9 |
9,661,390 (GRCm39) |
missense |
probably benign |
0.17 |
R7718:Cntn5
|
UTSW |
9 |
9,984,133 (GRCm39) |
missense |
probably benign |
|
R7719:Cntn5
|
UTSW |
9 |
9,704,903 (GRCm39) |
missense |
probably damaging |
1.00 |
R7788:Cntn5
|
UTSW |
9 |
9,704,934 (GRCm39) |
missense |
probably benign |
0.01 |
R7864:Cntn5
|
UTSW |
9 |
9,984,182 (GRCm39) |
missense |
probably damaging |
0.98 |
R7937:Cntn5
|
UTSW |
9 |
9,748,450 (GRCm39) |
missense |
probably damaging |
1.00 |
R8117:Cntn5
|
UTSW |
9 |
9,673,955 (GRCm39) |
missense |
probably benign |
0.33 |
R8159:Cntn5
|
UTSW |
9 |
10,145,386 (GRCm39) |
missense |
possibly damaging |
0.91 |
R8349:Cntn5
|
UTSW |
9 |
9,666,840 (GRCm39) |
critical splice donor site |
probably null |
|
R8449:Cntn5
|
UTSW |
9 |
9,666,840 (GRCm39) |
critical splice donor site |
probably null |
|
R8779:Cntn5
|
UTSW |
9 |
10,171,920 (GRCm39) |
missense |
probably benign |
|
R8789:Cntn5
|
UTSW |
9 |
9,673,292 (GRCm39) |
missense |
probably damaging |
1.00 |
R8985:Cntn5
|
UTSW |
9 |
10,171,960 (GRCm39) |
missense |
possibly damaging |
0.91 |
R9370:Cntn5
|
UTSW |
9 |
9,833,520 (GRCm39) |
missense |
probably benign |
0.19 |
R9382:Cntn5
|
UTSW |
9 |
9,673,817 (GRCm39) |
missense |
probably benign |
|
R9781:Cntn5
|
UTSW |
9 |
10,048,686 (GRCm39) |
critical splice donor site |
probably null |
|
Z1177:Cntn5
|
UTSW |
9 |
10,090,241 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Cntn5
|
UTSW |
9 |
9,673,967 (GRCm39) |
nonsense |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- TAGAGCCTTCTGTGGCATCACGAG -3'
(R):5'- GCTCATGTGTCAAAGCAGTGGAGTG -3'
Sequencing Primer
(F):5'- GGCTAGTTACTACTTAGCCCAGG -3'
(R):5'- CGCCTCTGTTATTGCTCACA -3'
|
Posted On |
2013-10-16 |