Incidental Mutation 'R0815:Lipm'
ID 78603
Institutional Source Beutler Lab
Gene Symbol Lipm
Ensembl Gene ENSMUSG00000056078
Gene Name lipase, family member M
Synonyms 4632427C23Rik, Lipl3
MMRRC Submission 038995-MU
Accession Numbers
Essential gene? Possibly essential (E-score: 0.594) question?
Stock # R0815 (G1)
Quality Score 225
Status Validated
Chromosome 19
Chromosomal Location 34078343-34100087 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 34096161 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Serine at position 326 (T326S)
Ref Sequence ENSEMBL: ENSMUSP00000025685 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000025685] [ENSMUST00000025686]
AlphaFold Q8K2A6
Predicted Effect probably benign
Transcript: ENSMUST00000025685
AA Change: T326S

PolyPhen 2 Score 0.129 (Sensitivity: 0.93; Specificity: 0.86)
SMART Domains Protein: ENSMUSP00000025685
Gene: ENSMUSG00000056078
AA Change: T326S

DomainStartEndE-ValueType
Pfam:Abhydro_lipase 49 111 3.3e-26 PFAM
Pfam:Abhydrolase_1 92 393 2.6e-29 PFAM
Pfam:Abhydrolase_5 93 387 2.5e-10 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000025686
SMART Domains Protein: ENSMUSP00000025686
Gene: ENSMUSG00000024774

DomainStartEndE-ValueType
ANK 39 68 1.1e-6 SMART
ANK 72 130 2.05e2 SMART
ANK 134 163 1.68e-2 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000159887
Predicted Effect noncoding transcript
Transcript: ENSMUST00000160474
Meta Mutation Damage Score 0.0591 question?
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.6%
  • 10x: 96.5%
  • 20x: 91.3%
Validation Efficiency 97% (58/60)
Allele List at MGI
Other mutations in this stock
Total: 57 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcb5 A G 12: 118,865,184 (GRCm39) probably benign Het
Abcf2 A T 5: 24,772,268 (GRCm39) Y487N probably damaging Het
Adcy4 T C 14: 56,021,056 (GRCm39) Y27C probably damaging Het
Atp2a2 T C 5: 122,609,299 (GRCm39) I188V probably benign Het
Cacna1s A T 1: 136,040,695 (GRCm39) I1231F possibly damaging Het
Capn7 T A 14: 31,091,714 (GRCm39) C704S possibly damaging Het
Celsr2 G T 3: 108,308,617 (GRCm39) T1770K possibly damaging Het
Chmp7 C T 14: 69,956,899 (GRCm39) M336I probably benign Het
Cul9 T C 17: 46,848,748 (GRCm39) probably null Het
Dpp10 A G 1: 123,360,658 (GRCm39) probably null Het
Dscaml1 A G 9: 45,656,372 (GRCm39) I1571V probably benign Het
Eif3j2 T A 18: 43,610,036 (GRCm39) Y259F probably benign Het
Erc2 A C 14: 27,747,105 (GRCm39) N345T probably benign Het
Fbxo21 T C 5: 118,133,573 (GRCm39) probably benign Het
Frmd8 A T 19: 5,915,084 (GRCm39) probably benign Het
Gfm1 T C 3: 67,381,928 (GRCm39) S705P probably damaging Het
Gucy1b2 T C 14: 62,656,511 (GRCm39) D282G probably benign Het
H2-Ab1 T C 17: 34,486,328 (GRCm39) I129T probably damaging Het
H2-M10.3 T A 17: 36,677,582 (GRCm39) Y232F probably damaging Het
Lrrc8c T C 5: 105,756,400 (GRCm39) L725P probably damaging Het
Map3k19 A G 1: 127,762,375 (GRCm39) probably benign Het
Med31 T A 11: 72,104,657 (GRCm39) N50I probably damaging Het
Myo15b T G 11: 115,757,162 (GRCm39) probably benign Het
Nemp1 T C 10: 127,528,893 (GRCm39) L199S probably damaging Het
Nod2 G A 8: 89,399,290 (GRCm39) probably benign Het
Oga C T 19: 45,771,425 (GRCm39) A49T probably benign Het
Or2ak6 A G 11: 58,593,435 (GRCm39) R303G possibly damaging Het
Or5b21 A G 19: 12,840,008 (GRCm39) I290V probably benign Het
Parva G A 7: 112,167,071 (GRCm39) V215M probably damaging Het
Phf1 T C 17: 27,156,114 (GRCm39) probably benign Het
Plscr1l1 A T 9: 92,233,140 (GRCm39) I88L possibly damaging Het
Ppp1r12c G T 7: 4,489,365 (GRCm39) Q240K probably damaging Het
Ralgapa1 A T 12: 55,809,466 (GRCm39) Y436* probably null Het
Ralgapa1 C A 12: 55,829,562 (GRCm39) probably benign Het
Rbm11 C T 16: 75,393,525 (GRCm39) R74C probably damaging Het
Robo3 A G 9: 37,333,479 (GRCm39) V744A probably damaging Het
Rsbn1 T G 3: 103,861,469 (GRCm39) S522A probably damaging Het
Scel T A 14: 103,823,916 (GRCm39) S381R possibly damaging Het
Sec31b G A 19: 44,506,612 (GRCm39) Q909* probably null Het
Slc38a11 T A 2: 65,184,124 (GRCm39) I176L possibly damaging Het
Slc39a4 C T 15: 76,496,839 (GRCm39) D574N probably damaging Het
Slc44a1 T G 4: 53,536,421 (GRCm39) V199G possibly damaging Het
Sltm A G 9: 70,469,190 (GRCm39) T150A probably benign Het
Son C A 16: 91,452,372 (GRCm39) A373D probably damaging Het
Sp140 C T 1: 85,547,772 (GRCm39) probably benign Het
Speg A G 1: 75,392,036 (GRCm39) Y1606C probably damaging Het
Srgap1 A T 10: 121,621,379 (GRCm39) V1061D probably damaging Het
Stat5a A G 11: 100,765,908 (GRCm39) probably null Het
Supt4a T A 11: 87,628,409 (GRCm39) probably benign Het
Teddm1b A G 1: 153,750,638 (GRCm39) K149R possibly damaging Het
Thnsl2 A T 6: 71,111,208 (GRCm39) L220* probably null Het
Tinf2 G A 14: 55,917,566 (GRCm39) P308S probably benign Het
Tmem131l A G 3: 83,847,879 (GRCm39) S329P probably benign Het
Tnf T C 17: 35,420,120 (GRCm39) probably benign Het
Upp2 A G 2: 58,661,568 (GRCm39) T144A probably benign Het
Vmn2r94 T G 17: 18,477,973 (GRCm39) Q146P probably damaging Het
Zfhx4 T A 3: 5,310,375 (GRCm39) S919R possibly damaging Het
Other mutations in Lipm
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01624:Lipm APN 19 34,098,545 (GRCm39) missense probably damaging 1.00
IGL01789:Lipm APN 19 34,096,147 (GRCm39) missense probably damaging 1.00
IGL01878:Lipm APN 19 34,093,911 (GRCm39) missense possibly damaging 0.63
IGL01897:Lipm APN 19 34,098,708 (GRCm39) missense probably damaging 1.00
IGL02713:Lipm APN 19 34,078,570 (GRCm39) start codon destroyed probably null 0.77
R0029:Lipm UTSW 19 34,093,948 (GRCm39) splice site probably benign
R0352:Lipm UTSW 19 34,090,275 (GRCm39) splice site probably benign
R0565:Lipm UTSW 19 34,093,906 (GRCm39) missense probably benign 0.00
R1658:Lipm UTSW 19 34,093,847 (GRCm39) missense probably benign
R2990:Lipm UTSW 19 34,093,886 (GRCm39) missense probably benign 0.03
R4758:Lipm UTSW 19 34,078,570 (GRCm39) start codon destroyed possibly damaging 0.59
R5446:Lipm UTSW 19 34,095,287 (GRCm39) missense possibly damaging 0.92
R5468:Lipm UTSW 19 34,086,954 (GRCm39) splice site probably null
R5905:Lipm UTSW 19 34,089,311 (GRCm39) missense probably benign
R6066:Lipm UTSW 19 34,090,374 (GRCm39) missense probably damaging 1.00
R6437:Lipm UTSW 19 34,098,657 (GRCm39) missense probably damaging 1.00
R6722:Lipm UTSW 19 34,098,665 (GRCm39) missense probably benign 0.00
R6927:Lipm UTSW 19 34,078,563 (GRCm39) start gained probably benign
R7007:Lipm UTSW 19 34,089,497 (GRCm39) missense probably damaging 1.00
R7031:Lipm UTSW 19 34,093,871 (GRCm39) missense probably benign
R7081:Lipm UTSW 19 34,098,723 (GRCm39) missense possibly damaging 0.90
R7092:Lipm UTSW 19 34,098,758 (GRCm39) missense possibly damaging 0.75
R7419:Lipm UTSW 19 34,093,881 (GRCm39) missense probably benign 0.09
R7426:Lipm UTSW 19 34,093,598 (GRCm39) missense possibly damaging 0.56
R7772:Lipm UTSW 19 34,095,291 (GRCm39) missense probably damaging 0.99
R8805:Lipm UTSW 19 34,090,308 (GRCm39) missense probably damaging 1.00
R9444:Lipm UTSW 19 34,098,690 (GRCm39) missense probably damaging 1.00
R9519:Lipm UTSW 19 34,090,392 (GRCm39) missense probably benign 0.00
R9545:Lipm UTSW 19 34,090,392 (GRCm39) missense probably benign 0.00
R9680:Lipm UTSW 19 34,089,494 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TTTGCCAAAAGAACCAGATTCACGC -3'
(R):5'- TCCCATGCCCTGCTGAAATGAAG -3'

Sequencing Primer
(F):5'- GATCTCTAAAGGGACTCCCAGTG -3'
(R):5'- CCTGCTGAAATGAAGGGTCTG -3'
Posted On 2013-10-16