Incidental Mutation 'IGL01399:Isg20'
| ID |
79568 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Isg20
|
| Ensembl Gene |
ENSMUSG00000039236 |
| Gene Name |
interferon-stimulated protein |
| Synonyms |
DnaQl, HEM45, 20kDa, 2010107M23Rik, 1600023I01Rik |
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
IGL01399
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
7 |
| Chromosomal Location |
78563172-78570144 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to T
at 78569836 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Threonine to Serine
at position 158
(T158S)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000113255
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000038142]
[ENSMUST00000118867]
[ENSMUST00000120331]
[ENSMUST00000121645]
[ENSMUST00000205981]
|
| AlphaFold |
Q9JL16 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000038142
AA Change: T158S
PolyPhen 2
Score 0.923 (Sensitivity: 0.81; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000040080
Gene: ENSMUSG00000039236
AA Change: T158S
| Domain | Start | End | E-Value | Type |
|---|
|
EXOIII
|
6 |
171 |
6.23e-47 |
SMART |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000118867
AA Change: T158S
PolyPhen 2
Score 0.923 (Sensitivity: 0.81; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000112480
Gene: ENSMUSG00000039236
AA Change: T158S
| Domain | Start | End | E-Value | Type |
|---|
|
EXOIII
|
6 |
171 |
6.23e-47 |
SMART |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000120331
AA Change: T158S
PolyPhen 2
Score 0.923 (Sensitivity: 0.81; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000113255
Gene: ENSMUSG00000039236
AA Change: T158S
| Domain | Start | End | E-Value | Type |
|---|
|
EXOIII
|
6 |
171 |
6.23e-47 |
SMART |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000121645
AA Change: H269L
PolyPhen 2
Score 0.015 (Sensitivity: 0.96; Specificity: 0.79)
|
| SMART Domains |
Protein: ENSMUSP00000112621
Gene: ENSMUSG00000039236
AA Change: H269L
| Domain | Start | End | E-Value | Type |
|---|
|
EXOIII
|
6 |
176 |
8.25e-29 |
SMART |
|
low complexity region
|
182 |
201 |
N/A |
INTRINSIC |
|
low complexity region
|
208 |
224 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000133042
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000205981
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000206812
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 44 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Apol11b |
G |
A |
15: 77,522,219 (GRCm39) |
T26M |
probably damaging |
Het |
| Asic4 |
T |
A |
1: 75,445,790 (GRCm39) |
N206K |
possibly damaging |
Het |
| Bsn |
A |
G |
9: 107,984,386 (GRCm39) |
Y3223H |
unknown |
Het |
| Btaf1 |
C |
T |
19: 36,977,570 (GRCm39) |
R1463* |
probably null |
Het |
| Ccdc146 |
A |
G |
5: 21,499,611 (GRCm39) |
I857T |
possibly damaging |
Het |
| Ccnf |
G |
A |
17: 24,443,986 (GRCm39) |
S594L |
probably damaging |
Het |
| Chd5 |
T |
C |
4: 152,441,144 (GRCm39) |
W195R |
probably damaging |
Het |
| Cntn1 |
A |
G |
15: 92,203,025 (GRCm39) |
Y769C |
probably damaging |
Het |
| Cwc22 |
T |
C |
2: 77,747,408 (GRCm39) |
E435G |
probably benign |
Het |
| Dct |
A |
G |
14: 118,273,890 (GRCm39) |
F339S |
probably damaging |
Het |
| Ddx54 |
G |
T |
5: 120,761,968 (GRCm39) |
E554* |
probably null |
Het |
| Dock3 |
G |
T |
9: 106,870,670 (GRCm39) |
S581R |
probably benign |
Het |
| Dst |
A |
G |
1: 34,156,598 (GRCm39) |
H176R |
probably benign |
Het |
| Emc8 |
A |
G |
8: 121,385,745 (GRCm39) |
M123T |
probably damaging |
Het |
| Evc |
T |
A |
5: 37,490,357 (GRCm39) |
D55V |
probably damaging |
Het |
| Gm5424 |
A |
G |
10: 61,907,272 (GRCm39) |
|
noncoding transcript |
Het |
| Gpr149 |
A |
T |
3: 62,511,852 (GRCm39) |
L49Q |
probably damaging |
Het |
| Hcfc1 |
C |
T |
X: 72,993,515 (GRCm39) |
V1217I |
possibly damaging |
Het |
| Hoxa4 |
G |
T |
6: 52,167,393 (GRCm39) |
Q263K |
probably damaging |
Het |
| Ift172 |
T |
C |
5: 31,423,592 (GRCm39) |
E790G |
probably benign |
Het |
| Ipp |
A |
G |
4: 116,372,384 (GRCm39) |
N138D |
probably damaging |
Het |
| Klf17 |
A |
G |
4: 117,616,356 (GRCm39) |
F325S |
probably damaging |
Het |
| Lilrb4a |
T |
C |
10: 51,370,161 (GRCm39) |
L233P |
probably benign |
Het |
| Malrd1 |
G |
A |
2: 16,106,768 (GRCm39) |
|
probably null |
Het |
| Myh9 |
A |
T |
15: 77,651,470 (GRCm39) |
L1544Q |
probably damaging |
Het |
| Nexmif |
T |
A |
X: 103,130,786 (GRCm39) |
D377V |
probably damaging |
Het |
| Nobox |
T |
C |
6: 43,280,972 (GRCm39) |
T501A |
probably benign |
Het |
| Noc3l |
T |
C |
19: 38,804,099 (GRCm39) |
D93G |
possibly damaging |
Het |
| Nrcam |
G |
T |
12: 44,622,667 (GRCm39) |
A938S |
probably benign |
Het |
| Nup205 |
T |
C |
6: 35,196,624 (GRCm39) |
I1120T |
possibly damaging |
Het |
| Or5b96 |
A |
T |
19: 12,867,803 (GRCm39) |
M46K |
probably benign |
Het |
| Or5h18 |
C |
T |
16: 58,847,629 (GRCm39) |
V214I |
probably benign |
Het |
| Ptpn3 |
T |
C |
4: 57,225,775 (GRCm39) |
D480G |
probably benign |
Het |
| Selenof |
C |
T |
3: 144,302,669 (GRCm39) |
T148I |
probably damaging |
Het |
| Sgce |
C |
A |
6: 4,746,997 (GRCm39) |
G31V |
probably damaging |
Het |
| Slc35e1 |
C |
A |
8: 73,238,534 (GRCm39) |
A325S |
probably damaging |
Het |
| Slc4a4 |
A |
G |
5: 89,376,794 (GRCm39) |
D1016G |
probably damaging |
Het |
| Synj2 |
T |
G |
17: 6,060,046 (GRCm39) |
C149W |
probably damaging |
Het |
| Tecpr1 |
A |
G |
5: 144,145,411 (GRCm39) |
|
probably null |
Het |
| Utp20 |
A |
G |
10: 88,594,164 (GRCm39) |
|
probably null |
Het |
| Vmn2r63 |
T |
A |
7: 42,553,543 (GRCm39) |
K571M |
probably damaging |
Het |
| Wdr53 |
A |
G |
16: 32,070,718 (GRCm39) |
D21G |
possibly damaging |
Het |
| Zbtb3 |
T |
C |
19: 8,780,819 (GRCm39) |
L144S |
probably damaging |
Het |
| Zfp185 |
T |
A |
X: 72,043,654 (GRCm39) |
S154T |
probably damaging |
Het |
|
| Other mutations in Isg20 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00589:Isg20
|
APN |
7 |
78,566,332 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01680:Isg20
|
APN |
7 |
78,566,333 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01769:Isg20
|
APN |
7 |
78,564,129 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0233:Isg20
|
UTSW |
7 |
78,566,334 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0233:Isg20
|
UTSW |
7 |
78,566,334 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0233:Isg20
|
UTSW |
7 |
78,564,243 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0233:Isg20
|
UTSW |
7 |
78,564,243 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0400:Isg20
|
UTSW |
7 |
78,566,473 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R1562:Isg20
|
UTSW |
7 |
78,569,891 (GRCm39) |
missense |
probably benign |
0.17 |
|
R1610:Isg20
|
UTSW |
7 |
78,564,257 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
R1894:Isg20
|
UTSW |
7 |
78,569,647 (GRCm39) |
missense |
probably benign |
0.01 |
|
R2033:Isg20
|
UTSW |
7 |
78,566,281 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R2992:Isg20
|
UTSW |
7 |
78,569,632 (GRCm39) |
missense |
probably benign |
0.10 |
|
R3159:Isg20
|
UTSW |
7 |
78,564,201 (GRCm39) |
missense |
possibly damaging |
0.62 |
|
R4678:Isg20
|
UTSW |
7 |
78,564,076 (GRCm39) |
unclassified |
probably benign |
|
|
R5787:Isg20
|
UTSW |
7 |
78,569,558 (GRCm39) |
missense |
probably benign |
0.04 |
|
R7834:Isg20
|
UTSW |
7 |
78,569,867 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8554:Isg20
|
UTSW |
7 |
78,566,425 (GRCm39) |
missense |
probably benign |
0.14 |
|
R9046:Isg20
|
UTSW |
7 |
78,569,823 (GRCm39) |
nonsense |
probably null |
|
|
R9052:Isg20
|
UTSW |
7 |
78,566,390 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9417:Isg20
|
UTSW |
7 |
78,569,605 (GRCm39) |
missense |
probably benign |
0.01 |
|
| Posted On |
2013-11-05 |
Incidental Mutation